RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 PPFIA3O75145 1194 aa16.65■□□□□ 0.26
CNN2-204ENST00000562075 NBR1Q14596 966 aa16.65■□□□□ 0.26
CNN2-204ENST00000562075 IFFO2Q5TF58 517 aa16.65■□□□□ 0.26
CNN2-204ENST00000562075 C9orf131Q5VYM1 1079 aa16.65■□□□□ 0.26
CNN2-204ENST00000562075 SAMD7Q7Z3H4 446 aa16.65■□□□□ 0.26
CNN2-204ENST00000562075 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
CNN2-204ENST00000562075 PNMA1Q8ND90 353 aa16.65■□□□□ 0.26
CNN2-204ENST00000562075 CTCFLQ8NI51 663 aaPredicted RBP16.65■□□□□ 0.26
CNN2-204ENST00000562075 CEP95Q96GE4 821 aa16.65■□□□□ 0.26
CNN2-204ENST00000562075 CCDC17Q96LX7 622 aa16.65■□□□□ 0.26
CNN2-204ENST00000562075 DNAJC18Q9H819 358 aa16.65■□□□□ 0.26
CNN2-204ENST00000562075 RBM28Q9NW13 759 aaKnown RBP16.65■□□□□ 0.26
CNN2-204ENST00000562075 F13A1P00488 732 aa16.64■□□□□ 0.25
CNN2-204ENST00000562075 EGFRP00533 1210 aa16.64■□□□□ 0.25
CNN2-204ENST00000562075 IFNAR1P17181 557 aa16.64■□□□□ 0.25
CNN2-204ENST00000562075 FOSBP53539 338 aa16.64■□□□□ 0.25
CNN2-204ENST00000562075 SSRP1Q08945 709 aaKnown RBP16.64■□□□□ 0.25
CNN2-204ENST00000562075 TROAPQ12815 778 aa16.64■□□□□ 0.25
CNN2-204ENST00000562075 TNFAIP1Q13829 316 aa16.64■□□□□ 0.25
CNN2-204ENST00000562075 NTRK3Q16288 839 aa16.64■□□□□ 0.25
CNN2-204ENST00000562075 GPR162Q16538 588 aa16.64■□□□□ 0.25
CNN2-204ENST00000562075 CLEC17AQ6ZS10 378 aa16.64■□□□□ 0.25
CNN2-204ENST00000562075 GPRC5DQ9NZD1 345 aa16.64■□□□□ 0.25
CNN2-204ENST00000562075 HERC5Q9UII4 1024 aaKnown RBP16.64■□□□□ 0.25
CNN2-204ENST00000562075 BAG4O95429 457 aaKnown RBP16.63■□□□□ 0.25
CNN2-204ENST00000562075 FMNL1O95466 1100 aaPredicted RBP16.63■□□□□ 0.25
CNN2-204ENST00000562075 SLURP2P0DP57 97 aa16.63■□□□□ 0.25
CNN2-204ENST00000562075 TOP1P11387 765 aaKnown RBP16.63■□□□□ 0.25
CNN2-204ENST00000562075 FDPSP14324 419 aaKnown RBP16.63■□□□□ 0.25
CNN2-204ENST00000562075 KIF5BP33176 963 aa16.63■□□□□ 0.25
CNN2-204ENST00000562075 MCM4P33991 863 aa16.63■□□□□ 0.25
CNN2-204ENST00000562075 CERKLQ49MI3 558 aaPredicted RBP16.63■□□□□ 0.25
CNN2-204ENST00000562075 PPP4R3BQ5MIZ7 849 aa16.63■□□□□ 0.25
CNN2-204ENST00000562075 CDC37L1Q7L3B6 337 aa16.63■□□□□ 0.25
CNN2-204ENST00000562075 METTL16Q86W50 562 aaKnown RBP16.63■□□□□ 0.25
CNN2-204ENST00000562075 TRIM22Q8IYM9 498 aa16.63■□□□□ 0.25
CNN2-204ENST00000562075 PHKBQ93100 1093 aa16.63■□□□□ 0.25
CNN2-204ENST00000562075 TMEM47Q9BQJ4 181 aa16.63■□□□□ 0.25
CNN2-204ENST00000562075 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.63■□□□□ 0.25
CNN2-204ENST00000562075 SLC26A6Q9BXS9 759 aa16.63■□□□□ 0.25
CNN2-204ENST00000562075 TMEM39BQ9GZU3 492 aa16.63■□□□□ 0.25
CNN2-204ENST00000562075 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.63■□□□□ 0.25
CNN2-204ENST00000562075 STK36Q9NRP7 1315 aa16.63■□□□□ 0.25
CNN2-204ENST00000562075 IGKV6D-41A0A0C4DH26 115 aa16.62■□□□□ 0.25
CNN2-204ENST00000562075 TATDN1Q6P1N9 297 aa16.62■□□□□ 0.25
CNN2-204ENST00000562075 WASF1Q92558 559 aa16.62■□□□□ 0.25
CNN2-204ENST00000562075 C8orf76Q96K31 380 aa16.62■□□□□ 0.25
CNN2-204ENST00000562075 MAP3K14Q99558 947 aa16.62■□□□□ 0.25
CNN2-204ENST00000562075 MTMR4Q9NYA4 1195 aa16.62■□□□□ 0.25
CNN2-204ENST00000562075 ATP6V1DQ9Y5K8 247 aa16.62■□□□□ 0.25
CNN2-204ENST00000562075 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
CNN2-204ENST00000562075 DDX11L8A8MPP1 907 aa16.61■□□□□ 0.25
CNN2-204ENST00000562075 GOLGA6L22H0YM25 854 aa16.61■□□□□ 0.25
CNN2-204ENST00000562075 TTLL1O95922 423 aa16.61■□□□□ 0.25
CNN2-204ENST00000562075 LMOD1P29536 600 aaPredicted RBP16.61■□□□□ 0.25
CNN2-204ENST00000562075 NOVP48745 357 aa16.61■□□□□ 0.25
CNN2-204ENST00000562075 GRM4Q14833 912 aa16.61■□□□□ 0.25
CNN2-204ENST00000562075 TMTC3Q6ZXV5 915 aa16.61■□□□□ 0.25
CNN2-204ENST00000562075 ALG1Q9BT22 464 aa16.61■□□□□ 0.25
CNN2-204ENST00000562075 HACL1Q9UJ83 578 aa16.61■□□□□ 0.25
CNN2-204ENST00000562075 DDNO94850 711 aaPredicted RBP16.6■□□□□ 0.25
CNN2-204ENST00000562075 PLEKHA8P1O95397 391 aa16.6■□□□□ 0.25
CNN2-204ENST00000562075 AKAP17AQ02040 695 aaKnown RBP16.6■□□□□ 0.25
CNN2-204ENST00000562075 RASA3Q14644 834 aa16.6■□□□□ 0.25
CNN2-204ENST00000562075 ABCB5Q2M3G0 1257 aa16.6■□□□□ 0.25
CNN2-204ENST00000562075 TMEM179Q6ZVK1 233 aa16.6■□□□□ 0.25
CNN2-204ENST00000562075 NBPF11Q86T75 865 aa16.6■□□□□ 0.25
CNN2-204ENST00000562075 CMTR1Q8N1G2 835 aaKnown RBP16.6■□□□□ 0.25
CNN2-204ENST00000562075 CCDC82Q8N4S0 544 aa16.6■□□□□ 0.25
CNN2-204ENST00000562075 TRPM4Q8TD43 1214 aa16.6■□□□□ 0.25
CNN2-204ENST00000562075 MTMR7Q9Y216 660 aa16.6■□□□□ 0.25
CNN2-204ENST00000562075 ASTN2O75129 1339 aaPredicted RBP16.6■□□□□ 0.25
CNN2-204ENST00000562075 GRIN3BO60391 1043 aa16.59■□□□□ 0.25
CNN2-204ENST00000562075 GDF11O95390 407 aa16.59■□□□□ 0.25
CNN2-204ENST00000562075 DEXIO95424 95 aa16.59■□□□□ 0.25
CNN2-204ENST00000562075 EPS15P42566 896 aa16.59■□□□□ 0.25
CNN2-204ENST00000562075 GNAQP50148 359 aa16.59■□□□□ 0.25
CNN2-204ENST00000562075 ATP2B2Q01814 1243 aa16.59■□□□□ 0.25
CNN2-204ENST00000562075 GUCY1B3Q02153 619 aa16.59■□□□□ 0.25
CNN2-204ENST00000562075 FOXD4L6Q3SYB3 417 aaPredicted RBP16.59■□□□□ 0.25
CNN2-204ENST00000562075 MCTP1Q6DN14 999 aa16.59■□□□□ 0.25
CNN2-204ENST00000562075 FOXD4L3Q6VB84 417 aaPredicted RBP16.59■□□□□ 0.25
CNN2-204ENST00000562075 FERMT3Q86UX7 667 aa16.59■□□□□ 0.25
CNN2-204ENST00000562075 CLEC10AQ8IUN9 316 aa16.59■□□□□ 0.25
CNN2-204ENST00000562075 APOBEC3FQ8IUX4 373 aaKnown RBP16.59■□□□□ 0.25
CNN2-204ENST00000562075 LRRC47Q8N1G4 583 aaKnown RBP16.59■□□□□ 0.25
CNN2-204ENST00000562075 RNF26Q9BY78 433 aaPredicted RBP16.59■□□□□ 0.25
CNN2-204ENST00000562075 CABP5Q9NP86 173 aa16.59■□□□□ 0.25
CNN2-204ENST00000562075 CLIP2Q9UDT6 1046 aa16.59■□□□□ 0.25
CNN2-204ENST00000562075 GOLGB1Q14789 3259 aaKnown RBP16.58■□□□□ 0.24
CNN2-204ENST00000562075 TBC1D12O60347 775 aa16.58■□□□□ 0.24
CNN2-204ENST00000562075 FUT2Q10981 343 aa16.58■□□□□ 0.24
CNN2-204ENST00000562075 TRIM29Q14134 588 aa16.58■□□□□ 0.24
CNN2-204ENST00000562075 CDAN1Q8IWY9 1227 aa16.58■□□□□ 0.24
CNN2-204ENST00000562075 RGS22Q8NE09 1264 aa16.58■□□□□ 0.24
CNN2-204ENST00000562075 KANSL2Q9H9L4 492 aa16.58■□□□□ 0.24
CNN2-204ENST00000562075 PGAP2Q9UHJ9 254 aa16.58■□□□□ 0.24
CNN2-204ENST00000562075 SCAF8Q9UPN6 1271 aaKnown RBP16.58■□□□□ 0.24
CNN2-204ENST00000562075 CNTNAP5Q8WYK1 1306 aa16.57■□□□□ 0.24
CNN2-204ENST00000562075 PRPF3O43395 683 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms