RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 ZNF792Q3KQV3 632 aa4.15□□□□□ -1.75
CHD9-204ENST00000561869 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
CHD9-204ENST00000561869 REC114Q7Z4M0 266 aa4.15□□□□□ -1.75
CHD9-204ENST00000561869 ZNF296Q8WUU4 475 aaPredicted RBP4.15□□□□□ -1.75
CHD9-204ENST00000561869 REV1Q9UBZ9 1251 aa4.15□□□□□ -1.75
CHD9-204ENST00000561869 GGT7Q9UJ14 662 aa4.15□□□□□ -1.75
CHD9-204ENST00000561869 TPX2Q9ULW0 747 aaKnown RBP4.15□□□□□ -1.75
CHD9-204ENST00000561869 CEP131Q9UPN4 1083 aa4.15□□□□□ -1.75
CHD9-204ENST00000561869 ROBO2Q9HCK4 1378 aa4.14□□□□□ -1.75
CHD9-204ENST00000561869 CHURC1-FNTBB4DL54 471 aa4.14□□□□□ -1.75
CHD9-204ENST00000561869 TLR3O15455 904 aaKnown RBP4.14□□□□□ -1.75
CHD9-204ENST00000561869 GRIN3BO60391 1043 aa4.14□□□□□ -1.75
CHD9-204ENST00000561869 RNASE1P07998 156 aaKnown RBP4.14□□□□□ -1.75
CHD9-204ENST00000561869 PLCL1Q15111 1095 aa4.14□□□□□ -1.75
CHD9-204ENST00000561869 ZNF648Q5T619 568 aaPredicted RBP4.14□□□□□ -1.75
CHD9-204ENST00000561869 HS2ST1Q7LGA3 356 aa4.14□□□□□ -1.75
CHD9-204ENST00000561869 SLFN12Q8IYM2 578 aa4.14□□□□□ -1.75
CHD9-204ENST00000561869 MFSD4AQ8N468 514 aa4.14□□□□□ -1.75
CHD9-204ENST00000561869 TMEM87AQ8NBN3 555 aa4.14□□□□□ -1.75
CHD9-204ENST00000561869 CYB5D2Q8WUJ1 264 aa4.14□□□□□ -1.75
CHD9-204ENST00000561869 ASB11Q8WXH4 323 aa4.14□□□□□ -1.75
CHD9-204ENST00000561869 Q96M66 194 aa4.14□□□□□ -1.75
CHD9-204ENST00000561869 HSPA12BQ96MM6 686 aa4.14□□□□□ -1.75
CHD9-204ENST00000561869 ATE1O95260 518 aa4.13□□□□□ -1.75
CHD9-204ENST00000561869 CBX7O95931 251 aa4.13□□□□□ -1.75
CHD9-204ENST00000561869 KIR3DL1P43629 444 aa4.13□□□□□ -1.75
CHD9-204ENST00000561869 FANCCQ00597 558 aa4.13□□□□□ -1.75
CHD9-204ENST00000561869 TNK2Q07912 1038 aa4.13□□□□□ -1.75
CHD9-204ENST00000561869 ANGEL2Q5VTE6 544 aaKnown RBP4.13□□□□□ -1.75
CHD9-204ENST00000561869 ZNF746Q6NUN9 644 aaPredicted RBP4.13□□□□□ -1.75
CHD9-204ENST00000561869 LRRN4CLQ8ND94 238 aa4.13□□□□□ -1.75
CHD9-204ENST00000561869 FAM13CQ8NE31 585 aa4.13□□□□□ -1.75
CHD9-204ENST00000561869 COX4I2Q96KJ9 171 aa4.13□□□□□ -1.75
CHD9-204ENST00000561869 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
CHD9-204ENST00000561869 BRMS1Q9HCU9 246 aa4.13□□□□□ -1.75
CHD9-204ENST00000561869 ATP13A1Q9HD20 1204 aa4.13□□□□□ -1.75
CHD9-204ENST00000561869 PRDM7Q9NQW5 492 aa4.13□□□□□ -1.75
CHD9-204ENST00000561869 UBP1Q9NZI7 540 aa4.13□□□□□ -1.75
CHD9-204ENST00000561869 SUPT16HQ9Y5B9 1047 aaKnown RBP4.13□□□□□ -1.75
CHD9-204ENST00000561869 SLC22A31A6NKX4 558 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 FAM155AB1AL88 458 aaPredicted RBP4.12□□□□□ -1.75
CHD9-204ENST00000561869 H3BS24 57 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 RECKO95980 971 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 CYP7A1P22680 504 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 VAMP1P23763 118 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 ETV3P41162 512 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 IKZF1Q13422 519 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 ZNF124Q15973 351 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 CDKAL1Q5VV42 579 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 DIEXFQ68CQ4 756 aaKnown RBP4.12□□□□□ -1.75
CHD9-204ENST00000561869 SLC23A3Q6PIS1 610 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 BAHD1Q8TBE0 780 aaPredicted RBP4.12□□□□□ -1.75
CHD9-204ENST00000561869 PI4K2BQ8TCG2 481 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 VWCEQ96DN2 955 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 EAF1Q96JC9 268 aaPredicted RBP4.12□□□□□ -1.75
CHD9-204ENST00000561869 EHMT1Q9H9B1 1298 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 LMCD1Q9NZU5 365 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 PCDHB14Q9Y5E9 798 aa4.12□□□□□ -1.75
CHD9-204ENST00000561869 WASH4PA8MWX3 477 aa4.11□□□□□ -1.75
CHD9-204ENST00000561869 SRFP11831 508 aa4.11□□□□□ -1.75
CHD9-204ENST00000561869 ZNF76P36508 570 aa4.11□□□□□ -1.75
CHD9-204ENST00000561869 YARSP54577 528 aaKnown RBP4.11□□□□□ -1.75
CHD9-204ENST00000561869 CLCQ05315 142 aa4.11□□□□□ -1.75
CHD9-204ENST00000561869 ZP2Q05996 745 aa4.11□□□□□ -1.75
CHD9-204ENST00000561869 CWF19L2Q2TBE0 894 aaKnown RBP4.11□□□□□ -1.75
CHD9-204ENST00000561869 THAP5Q7Z6K1 395 aa4.11□□□□□ -1.75
CHD9-204ENST00000561869 SLITRK4Q8IW52 837 aa4.11□□□□□ -1.75
CHD9-204ENST00000561869 PIWIL2Q8TC59 973 aaKnown RBP4.11□□□□□ -1.75
CHD9-204ENST00000561869 CCDC74BQ96LY2 380 aa4.11□□□□□ -1.75
CHD9-204ENST00000561869 NT5C1AQ9BXI3 368 aa4.11□□□□□ -1.75
CHD9-204ENST00000561869 DUSP15Q9H1R2 295 aaPredicted RBP4.11□□□□□ -1.75
CHD9-204ENST00000561869 RC3H2Q9HBD1 1191 aaKnown RBP4.11□□□□□ -1.75
CHD9-204ENST00000561869 METTL5Q9NRN9 209 aaKnown RBP4.11□□□□□ -1.75
CHD9-204ENST00000561869 KLHL3Q9UH77 587 aa4.11□□□□□ -1.75
CHD9-204ENST00000561869 RGS13O14921 159 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 LRRN2O75325 713 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 ESR1P03372 595 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 RACK1P63244 317 aaKnown RBP4.1□□□□□ -1.75
CHD9-204ENST00000561869 GAB4Q2WGN9 574 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 SEZ6Q53EL9 994 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 ZNF394Q53GI3 561 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 ATG4DQ86TL0 474 aaPredicted RBP4.1□□□□□ -1.75
CHD9-204ENST00000561869 REXO1Q8N1G1 1221 aaKnown RBP4.1□□□□□ -1.75
CHD9-204ENST00000561869 DTWD2Q8NBA8 298 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 RGS22Q8NE09 1264 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 RNF141Q8WVD5 230 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 UBE2FQ969M7 185 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 KREMEN1Q96MU8 473 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 KIF2CQ99661 725 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 CARS2Q9HA77 564 aaKnown RBP4.1□□□□□ -1.75
CHD9-204ENST00000561869 C19orf73Q9NVV2 129 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 KIAA1522Q9P206 1035 aaPredicted RBP4.1□□□□□ -1.75
CHD9-204ENST00000561869 ZSWIM5Q9P217 1185 aa4.1□□□□□ -1.75
CHD9-204ENST00000561869 UNCXA6NJT0 531 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 UBOX5O94941 541 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 APOBRQ0VD83 1088 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 CDCP2Q5VXM1 449 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 OVOS1Q6IE37 1185 aa4.09□□□□□ -1.75
CHD9-204ENST00000561869 METTL16Q86W50 562 aaKnown RBP4.09□□□□□ -1.75
CHD9-204ENST00000561869 KIAA0825Q8IV33 1275 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms