RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 GNAT2P19087 354 aa28.58■■■□□ 2.17
CDR2-202ENST00000561630 USP14P54578 494 aa28.58■■■□□ 2.17
CDR2-202ENST00000561630 IRX3P78415 501 aaPredicted RBP28.58■■■□□ 2.17
CDR2-202ENST00000561630 C16orf86Q6ZW13 317 aa28.58■■■□□ 2.17
CDR2-202ENST00000561630 ACER1Q8TDN7 264 aa28.58■■■□□ 2.17
CDR2-202ENST00000561630 CDK8P49336 464 aa28.57■■■□□ 2.16
CDR2-202ENST00000561630 SLC9C1Q4G0N8 1177 aa28.57■■■□□ 2.16
CDR2-202ENST00000561630 SBK1Q52WX2 424 aa28.57■■■□□ 2.16
CDR2-202ENST00000561630 B4GALNT3Q6L9W6 998 aa28.57■■■□□ 2.16
CDR2-202ENST00000561630 TMEM179Q6ZVK1 233 aa28.57■■■□□ 2.16
CDR2-202ENST00000561630 ZSWIM8A7E2V4 1837 aa28.56■■■□□ 2.16
CDR2-202ENST00000561630 MLLT1Q03111 559 aaPredicted RBP28.56■■■□□ 2.16
CDR2-202ENST00000561630 ZMYM1Q5SVZ6 1142 aa28.56■■■□□ 2.16
CDR2-202ENST00000561630 EVI5LQ96CN4 794 aa28.56■■■□□ 2.16
CDR2-202ENST00000561630 CCDC17Q96LX7 622 aa28.56■■■□□ 2.16
CDR2-202ENST00000561630 P2RX7Q99572 595 aaKnown RBP28.56■■■□□ 2.16
CDR2-202ENST00000561630 NUCB1Q02818 461 aa28.55■■■□□ 2.16
CDR2-202ENST00000561630 ZYXQ15942 572 aaKnown RBP28.55■■■□□ 2.16
CDR2-202ENST00000561630 NBPF11Q86T75 865 aa28.55■■■□□ 2.16
CDR2-202ENST00000561630 CHD1LQ86WJ1 897 aa28.55■■■□□ 2.16
CDR2-202ENST00000561630 ZNF333Q96JL9 665 aa28.55■■■□□ 2.16
CDR2-202ENST00000561630 SEC62Q99442 399 aaKnown RBP28.55■■■□□ 2.16
CDR2-202ENST00000561630 MYPNQ86TC9 1320 aa28.54■■■□□ 2.16
CDR2-202ENST00000561630 AKR1B1P15121 316 aa28.54■■■□□ 2.16
CDR2-202ENST00000561630 EPB41L4AQ9HCS5 686 aaPredicted RBP28.54■■■□□ 2.16
CDR2-202ENST00000561630 PATL2C9JE40 543 aaKnown RBP28.53■■■□□ 2.16
CDR2-202ENST00000561630 HERVK_113P62684 666 aa28.53■■■□□ 2.16
CDR2-202ENST00000561630 PRKCZQ05513 592 aa28.53■■■□□ 2.16
CDR2-202ENST00000561630 MORF4L1Q9UBU8 362 aa28.53■■■□□ 2.16
CDR2-202ENST00000561630 A0A1W2PRG0 241 aa28.52■■■□□ 2.16
CDR2-202ENST00000561630 VCAM1P19320 739 aa28.52■■■□□ 2.16
CDR2-202ENST00000561630 RAET1EQ8TD07 263 aa28.52■■■□□ 2.16
CDR2-202ENST00000561630 BAZ2AQ9UIF9 1905 aaKnown RBP28.51■■■□□ 2.16
CDR2-202ENST00000561630 USP17L15C9J2P7 530 aa28.51■■■□□ 2.15
CDR2-202ENST00000561630 USP17L13C9JLJ4 530 aa28.51■■■□□ 2.15
CDR2-202ENST00000561630 USP17L11C9JVI0 530 aa28.51■■■□□ 2.15
CDR2-202ENST00000561630 USP17L18D6R9N7 530 aa28.51■■■□□ 2.15
CDR2-202ENST00000561630 USP17L22D6RA61 530 aa28.51■■■□□ 2.15
CDR2-202ENST00000561630 USP17L17D6RBQ6 530 aa28.51■■■□□ 2.15
CDR2-202ENST00000561630 USP17L19D6RCP7 530 aa28.51■■■□□ 2.15
CDR2-202ENST00000561630 USP17L20D6RJB6 530 aa28.51■■■□□ 2.15
CDR2-202ENST00000561630 TNPO2O14787 897 aaKnown RBP28.51■■■□□ 2.15
CDR2-202ENST00000561630 APPP05067 770 aa28.51■■■□□ 2.15
CDR2-202ENST00000561630 USP17L24Q0WX57 530 aa28.51■■■□□ 2.15
CDR2-202ENST00000561630 SH3TC2Q8TF17 1288 aa28.51■■■□□ 2.15
CDR2-202ENST00000561630 BRCA2P51587 3418 aa28.5■■■□□ 2.15
CDR2-202ENST00000561630 TDO2P48775 406 aa28.5■■■□□ 2.15
CDR2-202ENST00000561630 TICAM2Q86XR7 235 aa28.5■■■□□ 2.15
CDR2-202ENST00000561630 SIAH1Q8IUQ4 282 aa28.5■■■□□ 2.15
CDR2-202ENST00000561630 IFNL3Q8IZI9 196 aa28.5■■■□□ 2.15
CDR2-202ENST00000561630 GTF3C2Q8WUA4 911 aaPredicted RBP28.5■■■□□ 2.15
CDR2-202ENST00000561630 GABRQQ9UN88 632 aa28.5■■■□□ 2.15
CDR2-202ENST00000561630 ROBO3Q96MS0 1386 aa28.5■■■□□ 2.15
CDR2-202ENST00000561630 MINDY4BA8MYZ0 360 aa28.49■■■□□ 2.15
CDR2-202ENST00000561630 ICA1Q05084 483 aa28.49■■■□□ 2.15
CDR2-202ENST00000561630 CATSPERGQ6ZRH7 1159 aa28.49■■■□□ 2.15
CDR2-202ENST00000561630 NACAP1Q9BZK3 213 aa28.49■■■□□ 2.15
CDR2-202ENST00000561630 RBPJLQ9UBG7 517 aa28.49■■■□□ 2.15
CDR2-202ENST00000561630 GRK4P32298 578 aa28.48■■■□□ 2.15
CDR2-202ENST00000561630 IRX6P78412 446 aaPredicted RBP28.48■■■□□ 2.15
CDR2-202ENST00000561630 PLEKHM2Q8IWE5 1019 aa28.48■■■□□ 2.15
CDR2-202ENST00000561630 GPRC5AQ8NFJ5 357 aa28.48■■■□□ 2.15
CDR2-202ENST00000561630 COA7Q96BR5 231 aa28.48■■■□□ 2.15
CDR2-202ENST00000561630 OSBPL3Q9H4L5 887 aa28.48■■■□□ 2.15
CDR2-202ENST00000561630 TXNRD2Q9NNW7 524 aa28.48■■■□□ 2.15
CDR2-202ENST00000561630 FLT3LGP49771 235 aa28.47■■■□□ 2.15
CDR2-202ENST00000561630 POTEEQ6S8J3 1075 aa28.47■■■□□ 2.15
CDR2-202ENST00000561630 CLEC10AQ8IUN9 316 aa28.47■■■□□ 2.15
CDR2-202ENST00000561630 KANSL2Q9H9L4 492 aa28.47■■■□□ 2.15
CDR2-202ENST00000561630 ARHGEF10LQ9HCE6 1279 aa28.47■■■□□ 2.15
CDR2-202ENST00000561630 TMX2Q9Y320 296 aa28.47■■■□□ 2.15
CDR2-202ENST00000561630 TNRC18O15417 2968 aaPredicted RBP28.46■■■□□ 2.15
CDR2-202ENST00000561630 POTEFA5A3E0 1075 aa28.46■■■□□ 2.15
CDR2-202ENST00000561630 RPAP3Q9H6T3 665 aaPredicted RBP28.46■■■□□ 2.15
CDR2-202ENST00000561630 SH2D4AQ9H788 454 aa28.46■■■□□ 2.15
CDR2-202ENST00000561630 PEX10O60683 326 aa28.45■■■□□ 2.14
CDR2-202ENST00000561630 RASA1P20936 1047 aa28.45■■■□□ 2.14
CDR2-202ENST00000561630 IRF5Q13568 498 aa28.45■■■□□ 2.14
CDR2-202ENST00000561630 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.45■■■□□ 2.14
CDR2-202ENST00000561630 TMEM106CQ9BVX2 250 aa28.45■■■□□ 2.14
CDR2-202ENST00000561630 MKNK2Q9HBH9 465 aa28.45■■■□□ 2.14
CDR2-202ENST00000561630 HELLSQ9NRZ9 838 aa28.45■■■□□ 2.14
CDR2-202ENST00000561630 ERVK-9P63128 1117 aa28.44■■■□□ 2.14
CDR2-202ENST00000561630 ERVK-24P63145 666 aa28.44■■■□□ 2.14
CDR2-202ENST00000561630 LBX2Q6XYB7 198 aa28.44■■■□□ 2.14
CDR2-202ENST00000561630 CCDC129Q6ZRS4 1044 aa28.44■■■□□ 2.14
CDR2-202ENST00000561630 STK11IPQ8N1F8 1099 aa28.44■■■□□ 2.14
CDR2-202ENST00000561630 SLAIN1Q8ND83 568 aa28.44■■■□□ 2.14
CDR2-202ENST00000561630 LPAR1Q92633 364 aa28.44■■■□□ 2.14
CDR2-202ENST00000561630 NAPBQ9H115 298 aa28.44■■■□□ 2.14
CDR2-202ENST00000561630 ZNF287Q9HBT7 754 aa28.44■■■□□ 2.14
CDR2-202ENST00000561630 RABGAP1Q9Y3P9 1069 aa28.44■■■□□ 2.14
CDR2-202ENST00000561630 TRIM6-TRIM34B2RNG4 842 aa28.43■■■□□ 2.14
CDR2-202ENST00000561630 FOXP2O15409 715 aa28.43■■■□□ 2.14
CDR2-202ENST00000561630 EEF2P13639 858 aaKnown RBP28.43■■■□□ 2.14
CDR2-202ENST00000561630 KIAA1755Q5JYT7 1200 aa28.43■■■□□ 2.14
CDR2-202ENST00000561630 PAGR1Q9BTK6 254 aa28.43■■■□□ 2.14
CDR2-202ENST00000561630 VCPKMTQ9H867 229 aa28.43■■■□□ 2.14
CDR2-202ENST00000561630 ADCY3O60266 1144 aa28.42■■■□□ 2.14
CDR2-202ENST00000561630 MYCP01106 439 aaPredicted RBP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms