RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 PTCH2Q9Y6C5 1203 aa18.57■□□□□ 0.56
CCDC113-203ENST00000561517 RBBP6Q7Z6E9 1792 aaKnown RBP18.56■□□□□ 0.56
CCDC113-203ENST00000561517 FAM110CQ1W6H9 321 aa18.56■□□□□ 0.56
CCDC113-203ENST00000561517 B4GALNT3Q6L9W6 998 aa18.56■□□□□ 0.56
CCDC113-203ENST00000561517 TMEM179Q6ZVK1 233 aa18.56■□□□□ 0.56
CCDC113-203ENST00000561517 CHD1LQ86WJ1 897 aa18.56■□□□□ 0.56
CCDC113-203ENST00000561517 ACER1Q8TDN7 264 aa18.56■□□□□ 0.56
CCDC113-203ENST00000561517 EVI5LQ96CN4 794 aa18.56■□□□□ 0.56
CCDC113-203ENST00000561517 CCDC17Q96LX7 622 aa18.56■□□□□ 0.56
CCDC113-203ENST00000561517 SRRDQ9UH36 339 aa18.56■□□□□ 0.56
CCDC113-203ENST00000561517 GREB1LQ9C091 1923 aaPredicted RBP18.56■□□□□ 0.56
CCDC113-203ENST00000561517 PDE4DIPQ5VU43 2346 aa18.55■□□□□ 0.56
CCDC113-203ENST00000561517 FMNL1O95466 1100 aaPredicted RBP18.55■□□□□ 0.56
CCDC113-203ENST00000561517 HOXD10P28358 340 aa18.55■□□□□ 0.56
CCDC113-203ENST00000561517 USP14P54578 494 aa18.55■□□□□ 0.56
CCDC113-203ENST00000561517 FCGRTP55899 365 aa18.55■□□□□ 0.56
CCDC113-203ENST00000561517 SOX10P56693 466 aa18.55■□□□□ 0.56
CCDC113-203ENST00000561517 IRX3P78415 501 aaPredicted RBP18.55■□□□□ 0.56
CCDC113-203ENST00000561517 TICAM2Q86XR7 235 aa18.55■□□□□ 0.56
CCDC113-203ENST00000561517 ANKRD13CQ8N6S4 541 aa18.55■□□□□ 0.56
CCDC113-203ENST00000561517 SEC62Q99442 399 aaKnown RBP18.55■□□□□ 0.56
CCDC113-203ENST00000561517 FEZ1Q99689 392 aa18.55■□□□□ 0.56
CCDC113-203ENST00000561517 EPB41L4AQ9HCS5 686 aaPredicted RBP18.55■□□□□ 0.56
CCDC113-203ENST00000561517 PATL2C9JE40 543 aaKnown RBP18.54■□□□□ 0.56
CCDC113-203ENST00000561517 MPHOSPH10O00566 681 aaKnown RBP18.54■□□□□ 0.56
CCDC113-203ENST00000561517 ECM2O94769 699 aaPredicted RBP18.54■□□□□ 0.56
CCDC113-203ENST00000561517 AKR1B1P15121 316 aa18.54■□□□□ 0.56
CCDC113-203ENST00000561517 PLEKHM2Q8IWE5 1019 aa18.54■□□□□ 0.56
CCDC113-203ENST00000561517 P2RX7Q99572 595 aaKnown RBP18.54■□□□□ 0.56
CCDC113-203ENST00000561517 OSBPL3Q9H4L5 887 aa18.54■□□□□ 0.56
CCDC113-203ENST00000561517 ROBO3Q96MS0 1386 aa18.54■□□□□ 0.56
CCDC113-203ENST00000561517 ZYXQ15942 572 aaKnown RBP18.53■□□□□ 0.56
CCDC113-203ENST00000561517 IFNL3Q8IZI9 196 aa18.53■□□□□ 0.56
CCDC113-203ENST00000561517 MORF4L1Q9UBU8 362 aa18.53■□□□□ 0.56
CCDC113-203ENST00000561517 RLFQ13129 1914 aa18.53■□□□□ 0.56
CCDC113-203ENST00000561517 MYPNQ86TC9 1320 aa18.52■□□□□ 0.56
CCDC113-203ENST00000561517 A0A1W2PRG0 241 aa18.52■□□□□ 0.56
CCDC113-203ENST00000561517 HERVK_113P62684 666 aa18.52■□□□□ 0.56
CCDC113-203ENST00000561517 IRX6P78412 446 aaPredicted RBP18.52■□□□□ 0.56
CCDC113-203ENST00000561517 SLC9C1Q4G0N8 1177 aa18.52■□□□□ 0.56
CCDC113-203ENST00000561517 SIAH1Q8IUQ4 282 aa18.52■□□□□ 0.56
CCDC113-203ENST00000561517 ZNF333Q96JL9 665 aa18.52■□□□□ 0.56
CCDC113-203ENST00000561517 USP17L15C9J2P7 530 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 USP17L13C9JLJ4 530 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 USP17L11C9JVI0 530 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 USP17L18D6R9N7 530 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 USP17L22D6RA61 530 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 USP17L17D6RBQ6 530 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 USP17L19D6RCP7 530 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 USP17L20D6RJB6 530 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 APPP05067 770 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 VCAM1P19320 739 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 TDO2P48775 406 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 USP17L24Q0WX57 530 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 CATSPERGQ6ZRH7 1159 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 NBPF11Q86T75 865 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 GTF3C2Q8WUA4 911 aaPredicted RBP18.51■□□□□ 0.55
CCDC113-203ENST00000561517 PARP14Q460N5 1801 aa18.51■□□□□ 0.55
CCDC113-203ENST00000561517 MINDY4BA8MYZ0 360 aa18.5■□□□□ 0.55
CCDC113-203ENST00000561517 MLLT1Q03111 559 aaPredicted RBP18.5■□□□□ 0.55
CCDC113-203ENST00000561517 ICA1Q05084 483 aa18.5■□□□□ 0.55
CCDC113-203ENST00000561517 PRKCZQ05513 592 aa18.5■□□□□ 0.55
CCDC113-203ENST00000561517 POTEEQ6S8J3 1075 aa18.5■□□□□ 0.55
CCDC113-203ENST00000561517 NACAP1Q9BZK3 213 aa18.5■□□□□ 0.55
CCDC113-203ENST00000561517 TXNRD2Q9NNW7 524 aa18.5■□□□□ 0.55
CCDC113-203ENST00000561517 HELLSQ9NRZ9 838 aa18.5■□□□□ 0.55
CCDC113-203ENST00000561517 GABRQQ9UN88 632 aa18.5■□□□□ 0.55
CCDC113-203ENST00000561517 PLXNB2O15031 1838 aa18.5■□□□□ 0.55
CCDC113-203ENST00000561517 MYH4Q9Y623 1939 aa18.5■□□□□ 0.55
CCDC113-203ENST00000561517 TNPO2O14787 897 aaKnown RBP18.49■□□□□ 0.55
CCDC113-203ENST00000561517 FOXP2O15409 715 aa18.49■□□□□ 0.55
CCDC113-203ENST00000561517 RASA1P20936 1047 aa18.49■□□□□ 0.55
CCDC113-203ENST00000561517 CCDC129Q6ZRS4 1044 aa18.49■□□□□ 0.55
CCDC113-203ENST00000561517 CLEC10AQ8IUN9 316 aa18.49■□□□□ 0.55
CCDC113-203ENST00000561517 RAET1EQ8TD07 263 aa18.49■□□□□ 0.55
CCDC113-203ENST00000561517 KANSL2Q9H9L4 492 aa18.49■□□□□ 0.55
CCDC113-203ENST00000561517 ARHGEF10LQ9HCE6 1279 aa18.49■□□□□ 0.55
CCDC113-203ENST00000561517 RBPJLQ9UBG7 517 aa18.49■□□□□ 0.55
CCDC113-203ENST00000561517 TMX2Q9Y320 296 aa18.49■□□□□ 0.55
CCDC113-203ENST00000561517 CENPFP49454 3210 aa18.49■□□□□ 0.55
CCDC113-203ENST00000561517 GRK4P32298 578 aa18.48■□□□□ 0.55
CCDC113-203ENST00000561517 LBX2Q6XYB7 198 aa18.48■□□□□ 0.55
CCDC113-203ENST00000561517 GPRC5AQ8NFJ5 357 aa18.48■□□□□ 0.55
CCDC113-203ENST00000561517 SH3TC2Q8TF17 1288 aa18.48■□□□□ 0.55
CCDC113-203ENST00000561517 COA7Q96BR5 231 aa18.48■□□□□ 0.55
CCDC113-203ENST00000561517 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.48■□□□□ 0.55
CCDC113-203ENST00000561517 NAPBQ9H115 298 aa18.48■□□□□ 0.55
CCDC113-203ENST00000561517 RPAP3Q9H6T3 665 aaPredicted RBP18.48■□□□□ 0.55
CCDC113-203ENST00000561517 TRIM6-TRIM34B2RNG4 842 aa18.47■□□□□ 0.55
CCDC113-203ENST00000561517 FLT3LGP49771 235 aa18.47■□□□□ 0.55
CCDC113-203ENST00000561517 ERVK-9P63128 1117 aa18.47■□□□□ 0.55
CCDC113-203ENST00000561517 ERVK-24P63145 666 aa18.47■□□□□ 0.55
CCDC113-203ENST00000561517 IRF5Q13568 498 aa18.47■□□□□ 0.55
CCDC113-203ENST00000561517 KIAA1755Q5JYT7 1200 aa18.47■□□□□ 0.55
CCDC113-203ENST00000561517 LPAR1Q92633 364 aa18.47■□□□□ 0.55
CCDC113-203ENST00000561517 FAM227BQ96M60 508 aa18.47■□□□□ 0.55
CCDC113-203ENST00000561517 SH2D4AQ9H788 454 aa18.47■□□□□ 0.55
CCDC113-203ENST00000561517 VCPKMTQ9H867 229 aa18.47■□□□□ 0.55
CCDC113-203ENST00000561517 MKNK2Q9HBH9 465 aa18.47■□□□□ 0.55
CCDC113-203ENST00000561517 ZNF287Q9HBT7 754 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms