RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 RAB3GAP1Q15042 981 aa16.18■□□□□ 0.18
SHF-210ENST00000561239 VPS53Q5VIR6 699 aa16.18■□□□□ 0.18
SHF-210ENST00000561239 IFNL3Q8IZI9 196 aa16.18■□□□□ 0.18
SHF-210ENST00000561239 CCDC171Q6TFL3 1326 aa16.18■□□□□ 0.18
SHF-210ENST00000561239 ADGRA2Q96PE1 1338 aa16.18■□□□□ 0.18
SHF-210ENST00000561239 BAZ2AQ9UIF9 1905 aaKnown RBP16.17■□□□□ 0.18
SHF-210ENST00000561239 CYP2D7A0A087X1C5 515 aa16.17■□□□□ 0.18
SHF-210ENST00000561239 CHMLP26374 656 aa16.17■□□□□ 0.18
SHF-210ENST00000561239 GCLCP48506 637 aaPredicted RBP16.17■□□□□ 0.18
SHF-210ENST00000561239 JAG1P78504 1218 aa16.17■□□□□ 0.18
SHF-210ENST00000561239 ALX1Q15699 326 aa16.17■□□□□ 0.18
SHF-210ENST00000561239 USP17L2Q6R6M4 530 aa16.17■□□□□ 0.18
SHF-210ENST00000561239 CCDC17Q96LX7 622 aa16.17■□□□□ 0.18
SHF-210ENST00000561239 FEZ1Q99689 392 aa16.17■□□□□ 0.18
SHF-210ENST00000561239 NACAP1Q9BZK3 213 aa16.17■□□□□ 0.18
SHF-210ENST00000561239 IL25Q9H293 177 aa16.17■□□□□ 0.18
SHF-210ENST00000561239 DIAPH3Q9NSV4 1193 aa16.17■□□□□ 0.18
SHF-210ENST00000561239 ZMYM6O95789 1325 aa16.17■□□□□ 0.18
SHF-210ENST00000561239 MPHOSPH10O00566 681 aaKnown RBP16.16■□□□□ 0.18
SHF-210ENST00000561239 BCRP11274 1271 aa16.16■□□□□ 0.18
SHF-210ENST00000561239 FCGRTP55899 365 aa16.16■□□□□ 0.18
SHF-210ENST00000561239 TREML2Q5T2D2 321 aa16.16■□□□□ 0.18
SHF-210ENST00000561239 TMEM179Q6ZVK1 233 aa16.16■□□□□ 0.18
SHF-210ENST00000561239 C16orf86Q6ZW13 317 aa16.16■□□□□ 0.18
SHF-210ENST00000561239 NBPF11Q86T75 865 aa16.16■□□□□ 0.18
SHF-210ENST00000561239 RAD50Q92878 1312 aa16.16■□□□□ 0.18
SHF-210ENST00000561239 PTPRFP10586 1907 aa16.15■□□□□ 0.18
SHF-210ENST00000561239 FMNL1O95466 1100 aaPredicted RBP16.15■□□□□ 0.18
SHF-210ENST00000561239 APPP05067 770 aa16.15■□□□□ 0.18
SHF-210ENST00000561239 HSPD1P10809 573 aaKnown RBP16.15■□□□□ 0.18
SHF-210ENST00000561239 HOXA7P31268 230 aaPredicted RBP16.15■□□□□ 0.18
SHF-210ENST00000561239 PSMC4P43686 418 aa16.15■□□□□ 0.18
SHF-210ENST00000561239 IRX3P78415 501 aaPredicted RBP16.15■□□□□ 0.18
SHF-210ENST00000561239 CWC27Q6UX04 472 aaKnown RBP16.15■□□□□ 0.18
SHF-210ENST00000561239 GTF3C2Q8WUA4 911 aaPredicted RBP16.15■□□□□ 0.18
SHF-210ENST00000561239 DYNLL2Q96FJ2 89 aa16.15■□□□□ 0.18
SHF-210ENST00000561239 ZNF287Q9HBT7 754 aa16.15■□□□□ 0.18
SHF-210ENST00000561239 LOC285556D6RIA3 1793 aa16.14■□□□□ 0.17
SHF-210ENST00000561239 TDO2P48775 406 aa16.14■□□□□ 0.17
SHF-210ENST00000561239 FAM110CQ1W6H9 321 aa16.14■□□□□ 0.17
SHF-210ENST00000561239 SHROOM1Q2M3G4 852 aaPredicted RBP16.14■□□□□ 0.17
SHF-210ENST00000561239 SLC44A5Q8NCS7 719 aa16.14■□□□□ 0.17
SHF-210ENST00000561239 C12orf42Q96LP6 360 aa16.14■□□□□ 0.17
SHF-210ENST00000561239 KIAA1683Q9H0B3 1180 aa16.14■□□□□ 0.17
SHF-210ENST00000561239 ASCC2Q9H1I8 757 aaPredicted RBP16.14■□□□□ 0.17
SHF-210ENST00000561239 SH2D4AQ9H788 454 aa16.14■□□□□ 0.17
SHF-210ENST00000561239 FGAP02671 866 aa16.13■□□□□ 0.17
SHF-210ENST00000561239 CDK8P49336 464 aa16.13■□□□□ 0.17
SHF-210ENST00000561239 RGS19P49795 217 aa16.13■□□□□ 0.17
SHF-210ENST00000561239 MFAP1P55081 439 aaKnown RBP16.13■□□□□ 0.17
SHF-210ENST00000561239 ANKRD13CQ8N6S4 541 aa16.13■□□□□ 0.17
SHF-210ENST00000561239 NAPBQ9H115 298 aa16.13■□□□□ 0.17
SHF-210ENST00000561239 SRRDQ9UH36 339 aa16.13■□□□□ 0.17
SHF-210ENST00000561239 ANAPC4Q9UJX5 808 aa16.13■□□□□ 0.17
SHF-210ENST00000561239 SGSM2O43147 1006 aa16.12■□□□□ 0.17
SHF-210ENST00000561239 SLC3A2P08195 630 aaKnown RBP16.12■□□□□ 0.17
SHF-210ENST00000561239 GUCY1A2P33402 732 aa16.12■□□□□ 0.17
SHF-210ENST00000561239 SEPT2Q15019 361 aa16.12■□□□□ 0.17
SHF-210ENST00000561239 SLC9C1Q4G0N8 1177 aa16.12■□□□□ 0.17
SHF-210ENST00000561239 TRIM47Q96LD4 638 aa16.12■□□□□ 0.17
SHF-210ENST00000561239 DSCC1Q9BVC3 393 aa16.12■□□□□ 0.17
SHF-210ENST00000561239 ARHGAP39Q9C0H5 1083 aa16.12■□□□□ 0.17
SHF-210ENST00000561239 MKNK2Q9HBH9 465 aa16.12■□□□□ 0.17
SHF-210ENST00000561239 ARHGEF10LQ9HCE6 1279 aa16.12■□□□□ 0.17
SHF-210ENST00000561239 EMILIN3Q9NT22 766 aa16.12■□□□□ 0.17
SHF-210ENST00000561239 MINDY4BA8MYZ0 360 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 USP17L15C9J2P7 530 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 USP17L13C9JLJ4 530 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 USP17L11C9JVI0 530 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 USP17L18D6R9N7 530 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 USP17L22D6RA61 530 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 USP17L17D6RBQ6 530 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 USP17L19D6RCP7 530 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 USP17L20D6RJB6 530 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 FGRP09769 529 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 PPARAQ07869 468 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 USP17L24Q0WX57 530 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 RAET1EQ8TD07 263 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 COA7Q96BR5 231 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 ARMC5Q96C12 935 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 PTCH2Q9Y6C5 1203 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 MYPNQ86TC9 1320 aa16.11■□□□□ 0.17
SHF-210ENST00000561239 GREB1LQ9C091 1923 aaPredicted RBP16.1■□□□□ 0.17
SHF-210ENST00000561239 TNPO2O14787 897 aaKnown RBP16.1■□□□□ 0.17
SHF-210ENST00000561239 RASA1P20936 1047 aa16.1■□□□□ 0.17
SHF-210ENST00000561239 HERVK_113P62684 666 aa16.1■□□□□ 0.17
SHF-210ENST00000561239 CAP1Q01518 475 aa16.1■□□□□ 0.17
SHF-210ENST00000561239 ZYXQ15942 572 aaKnown RBP16.1■□□□□ 0.17
SHF-210ENST00000561239 ACER1Q8TDN7 264 aa16.1■□□□□ 0.17
SHF-210ENST00000561239 RUFY2Q8WXA3 655 aa16.1■□□□□ 0.17
SHF-210ENST00000561239 LPAR1Q92633 364 aa16.1■□□□□ 0.17
SHF-210ENST00000561239 KANSL2Q9H9L4 492 aa16.1■□□□□ 0.17
SHF-210ENST00000561239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.1■□□□□ 0.17
SHF-210ENST00000561239 TACC3Q9Y6A5 838 aa16.1■□□□□ 0.17
SHF-210ENST00000561239 AKR1B1P15121 316 aa16.09■□□□□ 0.17
SHF-210ENST00000561239 ICA1Q05084 483 aa16.09■□□□□ 0.17
SHF-210ENST00000561239 ZNF444Q8N0Y2 327 aaPredicted RBP16.09■□□□□ 0.17
SHF-210ENST00000561239 GPRC5AQ8NFJ5 357 aa16.09■□□□□ 0.17
SHF-210ENST00000561239 P2RX7Q99572 595 aaKnown RBP16.09■□□□□ 0.17
SHF-210ENST00000561239 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms