RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 PLXNC1O60486 1568 aa6.85□□□□□ -1.31
AP4E1-204ENST00000561004 SHANK2Q9UPX8 1470 aa6.85□□□□□ -1.31
AP4E1-204ENST00000561004 KIDINS220Q9ULH0 1771 aa6.85□□□□□ -1.31
AP4E1-204ENST00000561004 RICTORQ6R327 1708 aa6.84□□□□□ -1.31
AP4E1-204ENST00000561004 CFAP65Q6ZU64 1925 aaKnown RBP6.84□□□□□ -1.31
AP4E1-204ENST00000561004 TMPRSS2O15393 492 aa6.84□□□□□ -1.31
AP4E1-204ENST00000561004 NDUFB5O43674 189 aa6.84□□□□□ -1.31
AP4E1-204ENST00000561004 LEFTY1O75610 366 aa6.84□□□□□ -1.31
AP4E1-204ENST00000561004 PDIA4P13667 645 aaKnown RBP6.84□□□□□ -1.31
AP4E1-204ENST00000561004 ID3Q02535 119 aa6.84□□□□□ -1.31
AP4E1-204ENST00000561004 INO80Q9ULG1 1556 aaPredicted RBP6.83□□□□□ -1.32
AP4E1-204ENST00000561004 EREGO14944 169 aa6.83□□□□□ -1.32
AP4E1-204ENST00000561004 RNGTTO60942 597 aaKnown RBP6.83□□□□□ -1.32
AP4E1-204ENST00000561004 PDE3BQ13370 1112 aa6.83□□□□□ -1.32
AP4E1-204ENST00000561004 ZXDCQ2QGD7 858 aaPredicted RBP6.83□□□□□ -1.32
AP4E1-204ENST00000561004 TCERG1LQ5VWI1 586 aa6.83□□□□□ -1.32
AP4E1-204ENST00000561004 CYB5RLQ6IPT4 315 aa6.83□□□□□ -1.32
AP4E1-204ENST00000561004 NPAS4Q8IUM7 802 aa6.83□□□□□ -1.32
AP4E1-204ENST00000561004 TMEM151BQ8IW70 566 aa6.83□□□□□ -1.32
AP4E1-204ENST00000561004 SNX29Q8TEQ0 813 aa6.83□□□□□ -1.32
AP4E1-204ENST00000561004 KCNC2Q96PR1 638 aa6.83□□□□□ -1.32
AP4E1-204ENST00000561004 FANCD2OSQ96PS1 177 aa6.83□□□□□ -1.32
AP4E1-204ENST00000561004 PZPP20742 1482 aa6.83□□□□□ -1.32
AP4E1-204ENST00000561004 CCDC141Q6ZP82 1450 aa6.83□□□□□ -1.32
AP4E1-204ENST00000561004 C9orf84Q5VXU9 1444 aa6.83□□□□□ -1.32
AP4E1-204ENST00000561004 TRAPPC8Q9Y2L5 1435 aa6.83□□□□□ -1.32
AP4E1-204ENST00000561004 GLI2P10070 1586 aa6.82□□□□□ -1.32
AP4E1-204ENST00000561004 CFAP74Q9C0B2 1584 aa6.82□□□□□ -1.32
AP4E1-204ENST00000561004 DIP2BQ9P265 1576 aa6.82□□□□□ -1.32
AP4E1-204ENST00000561004 CLSPNQ9HAW4 1339 aa6.82□□□□□ -1.32
AP4E1-204ENST00000561004 GNAT3A8MTJ3 354 aa6.82□□□□□ -1.32
AP4E1-204ENST00000561004 TNFRSF21O75509 655 aa6.82□□□□□ -1.32
AP4E1-204ENST00000561004 NEFLP07196 543 aa6.82□□□□□ -1.32
AP4E1-204ENST00000561004 ABHD4Q8TB40 342 aa6.82□□□□□ -1.32
AP4E1-204ENST00000561004 SIN3AQ96ST3 1273 aa6.82□□□□□ -1.32
AP4E1-204ENST00000561004 SSU72Q9NP77 194 aaKnown RBP6.82□□□□□ -1.32
AP4E1-204ENST00000561004 AMOTL2Q9Y2J4 779 aa6.82□□□□□ -1.32
AP4E1-204ENST00000561004 KIAA1107Q9UPP5 1409 aa6.82□□□□□ -1.32
AP4E1-204ENST00000561004 UNC13BO14795 1591 aa6.82□□□□□ -1.32
AP4E1-204ENST00000561004 A6NHS1 94 aa6.81□□□□□ -1.32
AP4E1-204ENST00000561004 SASH1O94885 1247 aa6.81□□□□□ -1.32
AP4E1-204ENST00000561004 B3GALT4O96024 378 aa6.81□□□□□ -1.32
AP4E1-204ENST00000561004 SPACA3Q8IXA5 215 aa6.81□□□□□ -1.32
AP4E1-204ENST00000561004 TOP6BLQ8N6T0 577 aa6.81□□□□□ -1.32
AP4E1-204ENST00000561004 MARCH10Q8NA82 808 aaPredicted RBP6.81□□□□□ -1.32
AP4E1-204ENST00000561004 FAM129BQ96TA1 746 aa6.81□□□□□ -1.32
AP4E1-204ENST00000561004 RBCK1Q9BYM8 510 aa6.81□□□□□ -1.32
AP4E1-204ENST00000561004 IVNS1ABPQ9Y6Y0 642 aa6.81□□□□□ -1.32
AP4E1-204ENST00000561004 PITPNM2Q9BZ72 1349 aa6.8□□□□□ -1.32
AP4E1-204ENST00000561004 FANCAO15360 1455 aa6.8□□□□□ -1.32
AP4E1-204ENST00000561004 PLEKHH2Q8IVE3 1493 aa6.8□□□□□ -1.32
AP4E1-204ENST00000561004 DEPDC5O75140 1603 aa6.8□□□□□ -1.32
AP4E1-204ENST00000561004 KRTAP1-1Q07627 177 aa6.8□□□□□ -1.32
AP4E1-204ENST00000561004 ZNF385BQ569K4 471 aa6.8□□□□□ -1.32
AP4E1-204ENST00000561004 EFCAB2Q5VUJ9 269 aa6.8□□□□□ -1.32
AP4E1-204ENST00000561004 BAHD1Q8TBE0 780 aaPredicted RBP6.8□□□□□ -1.32
AP4E1-204ENST00000561004 TRIM56Q9BRZ2 755 aaKnown RBP6.8□□□□□ -1.32
AP4E1-204ENST00000561004 CARS2Q9HA77 564 aaKnown RBP6.8□□□□□ -1.32
AP4E1-204ENST00000561004 ZFYVE28Q9HCC9 887 aa6.8□□□□□ -1.32
AP4E1-204ENST00000561004 ZFYVE16Q7Z3T8 1539 aa6.8□□□□□ -1.32
AP4E1-204ENST00000561004 KDM5DQ9BY66 1539 aa6.8□□□□□ -1.32
AP4E1-204ENST00000561004 IQGAP3Q86VI3 1631 aa6.79□□□□□ -1.32
AP4E1-204ENST00000561004 CEP152O94986 1710 aa6.79□□□□□ -1.32
AP4E1-204ENST00000561004 NFKB2Q00653 900 aa6.79□□□□□ -1.32
AP4E1-204ENST00000561004 SKOR2Q2VWA4 1001 aaPredicted RBP6.79□□□□□ -1.32
AP4E1-204ENST00000561004 PEAR1Q5VY43 1037 aaPredicted RBP6.79□□□□□ -1.32
AP4E1-204ENST00000561004 DMRTB1Q96MA1 342 aa6.79□□□□□ -1.32
AP4E1-204ENST00000561004 DCTN4Q9UJW0 460 aa6.79□□□□□ -1.32
AP4E1-204ENST00000561004 ANKRD30AQ9BXX3 1397 aa6.79□□□□□ -1.32
AP4E1-204ENST00000561004 FRMPD1Q5SYB0 1578 aa6.78□□□□□ -1.32
AP4E1-204ENST00000561004 E9PCH4 1651 aa6.78□□□□□ -1.32
AP4E1-204ENST00000561004 ATP7AQ04656 1500 aa6.78□□□□□ -1.32
AP4E1-204ENST00000561004 METTL12A8MUP2 240 aa6.78□□□□□ -1.32
AP4E1-204ENST00000561004 RFXAPO00287 272 aa6.78□□□□□ -1.32
AP4E1-204ENST00000561004 SUV39H1O43463 412 aa6.78□□□□□ -1.32
AP4E1-204ENST00000561004 TTLL4Q14679 1199 aa6.78□□□□□ -1.32
AP4E1-204ENST00000561004 CCNJLQ8IV13 435 aa6.78□□□□□ -1.32
AP4E1-204ENST00000561004 ALKBH8Q96BT7 664 aaKnown RBP6.78□□□□□ -1.32
AP4E1-204ENST00000561004 HEXIM2Q96MH2 286 aaKnown RBP6.78□□□□□ -1.32
AP4E1-204ENST00000561004 MPHOSPH9Q99550 1183 aa6.78□□□□□ -1.32
AP4E1-204ENST00000561004 DISC1Q9NRI5 854 aa6.78□□□□□ -1.32
AP4E1-204ENST00000561004 BIN2Q9UBW5 565 aaPredicted RBP6.78□□□□□ -1.32
AP4E1-204ENST00000561004 ABCA6Q8N139 1617 aa6.78□□□□□ -1.32
AP4E1-204ENST00000561004 MROH1Q8NDA8 1641 aa6.78□□□□□ -1.32
AP4E1-204ENST00000561004 KDM5CP41229 1560 aa6.78□□□□□ -1.32
AP4E1-204ENST00000561004 CD109Q6YHK3 1445 aa6.77□□□□□ -1.33
AP4E1-204ENST00000561004 ANKRD50Q9ULJ7 1429 aa6.77□□□□□ -1.33
AP4E1-204ENST00000561004 DUOX2Q9NRD8 1548 aa6.77□□□□□ -1.33
AP4E1-204ENST00000561004 BCORL1Q5H9F3 1711 aa6.77□□□□□ -1.33
AP4E1-204ENST00000561004 SIGLEC1Q9BZZ2 1709 aa6.77□□□□□ -1.33
AP4E1-204ENST00000561004 ECEL1O95672 775 aa6.77□□□□□ -1.33
AP4E1-204ENST00000561004 SPATS1Q496A3 300 aa6.77□□□□□ -1.33
AP4E1-204ENST00000561004 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.77□□□□□ -1.33
AP4E1-204ENST00000561004 C19orf73Q9NVV2 129 aa6.77□□□□□ -1.33
AP4E1-204ENST00000561004 FOXD3Q9UJU5 478 aaPredicted RBP6.77□□□□□ -1.33
AP4E1-204ENST00000561004 KIF15Q9NS87 1388 aa6.77□□□□□ -1.33
AP4E1-204ENST00000561004 ADGRL1O94910 1474 aa6.77□□□□□ -1.33
AP4E1-204ENST00000561004 SCAPERQ9BY12 1400 aa6.76□□□□□ -1.33
AP4E1-204ENST00000561004 EIF2AK4Q9P2K8 1649 aaKnown RBP6.76□□□□□ -1.33
AP4E1-204ENST00000561004 TSPY4P0CV99 314 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms