RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 ABCF2Q9UG63 623 aa9.22□□□□□ -0.93
APH1B-209ENST00000560716 PRKAG2Q9UGJ0 569 aa9.22□□□□□ -0.93
APH1B-209ENST00000560716 ROBO3Q96MS0 1386 aa9.22□□□□□ -0.93
APH1B-209ENST00000560716 COL9A1P20849 921 aa9.21□□□□□ -0.94
APH1B-209ENST00000560716 ARID4AP29374 1257 aaPredicted RBP9.21□□□□□ -0.94
APH1B-209ENST00000560716 ALDH1L2Q3SY69 923 aa9.21□□□□□ -0.94
APH1B-209ENST00000560716 USP17L2Q6R6M4 530 aa9.21□□□□□ -0.94
APH1B-209ENST00000560716 TRPV1Q8NER1 839 aa9.21□□□□□ -0.94
APH1B-209ENST00000560716 ATXN2LQ8WWM7 1075 aaKnown RBP9.21□□□□□ -0.94
APH1B-209ENST00000560716 MYLIPQ8WY64 445 aa9.21□□□□□ -0.94
APH1B-209ENST00000560716 XAGE2Q96GT9 111 aa9.21□□□□□ -0.94
APH1B-209ENST00000560716 FAM161BQ96MY7 647 aa9.21□□□□□ -0.94
APH1B-209ENST00000560716 PDLIM7Q9NR12 457 aa9.21□□□□□ -0.94
APH1B-209ENST00000560716 HMG20BQ9P0W2 317 aa9.21□□□□□ -0.94
APH1B-209ENST00000560716 ZBTB47Q9UFB7 747 aaPredicted RBP9.21□□□□□ -0.94
APH1B-209ENST00000560716 ZBTB21Q9ULJ3 1066 aa9.21□□□□□ -0.94
APH1B-209ENST00000560716 AKAP2Q9Y2D5 859 aa9.21□□□□□ -0.94
APH1B-209ENST00000560716 GBF1Q92538 1859 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 A0A1B0GUL7 405 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 USP17L15C9J2P7 530 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 USP17L13C9JLJ4 530 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 USP17L11C9JVI0 530 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 USP17L18D6R9N7 530 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 USP17L22D6RA61 530 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 USP17L17D6RBQ6 530 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 USP17L19D6RCP7 530 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 USP17L20D6RJB6 530 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 KIAA0355O15063 1070 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 SEPT4O43236 478 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 STRNO43815 780 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 FOSL2P15408 326 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 PLCG2P16885 1265 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 PLA2G5P39877 138 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 TIMM10P62072 90 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 USP17L24Q0WX57 530 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 TPRNQ4KMQ1 711 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 AKNAD1Q5T1N1 836 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 TATDN1Q6P1N9 297 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 CATSPERGQ6ZRH7 1159 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 SPDYE1Q8NFV5 336 aaPredicted RBP9.2□□□□□ -0.94
APH1B-209ENST00000560716 RNF25Q96BH1 459 aaPredicted RBP9.2□□□□□ -0.94
APH1B-209ENST00000560716 KIAA1683Q9H0B3 1180 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 NRBP1Q9UHY1 535 aa9.2□□□□□ -0.94
APH1B-209ENST00000560716 COL11A1P12107 1806 aaPredicted RBP9.19□□□□□ -0.94
APH1B-209ENST00000560716 CHD9Q3L8U1 2897 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 MYH8P13535 1937 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 TRIM43BA6NCK2 446 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 PEX10O60683 326 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 USP14P54578 494 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 TMED8Q6PL24 325 aaPredicted RBP9.19□□□□□ -0.94
APH1B-209ENST00000560716 TEX11Q8IYF3 940 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 ABRAQ8N0Z2 381 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 SPATA5Q8NB90 893 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 SHCBP1Q8NEM2 672 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 NPLOC4Q8TAT6 608 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 SSH1Q8WYL5 1049 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 BADQ92934 168 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 TRIM43Q96BQ3 446 aaPredicted RBP9.19□□□□□ -0.94
APH1B-209ENST00000560716 EHD4Q9H223 541 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 TACC3Q9Y6A5 838 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 SYNGAP1Q96PV0 1343 aa9.19□□□□□ -0.94
APH1B-209ENST00000560716 BDP1A6H8Y1 2624 aa9.18□□□□□ -0.94
APH1B-209ENST00000560716 BAG3O95817 575 aa9.18□□□□□ -0.94
APH1B-209ENST00000560716 UBTFL1P0CB47 393 aaPredicted RBP9.18□□□□□ -0.94
APH1B-209ENST00000560716 FLT1P17948 1338 aa9.18□□□□□ -0.94
APH1B-209ENST00000560716 ATN1P54259 1190 aaPredicted RBP9.18□□□□□ -0.94
APH1B-209ENST00000560716 ATP2B2Q01814 1243 aa9.18□□□□□ -0.94
APH1B-209ENST00000560716 RASIP1Q5U651 963 aa9.18□□□□□ -0.94
APH1B-209ENST00000560716 CERS3Q8IU89 383 aa9.18□□□□□ -0.94
APH1B-209ENST00000560716 ZNF512BQ96KM6 892 aaPredicted RBP9.18□□□□□ -0.94
APH1B-209ENST00000560716 TOX2Q96NM4 488 aa9.18□□□□□ -0.94
APH1B-209ENST00000560716 SIL1Q9H173 461 aa9.18□□□□□ -0.94
APH1B-209ENST00000560716 PHF24Q9UPV7 400 aa9.18□□□□□ -0.94
APH1B-209ENST00000560716 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.17□□□□□ -0.94
APH1B-209ENST00000560716 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.17□□□□□ -0.94
APH1B-209ENST00000560716 KBTBD13C9JR72 458 aa9.17□□□□□ -0.94
APH1B-209ENST00000560716 UQCRFS1P1P0C7P4 283 aa9.17□□□□□ -0.94
APH1B-209ENST00000560716 GRIN2CQ14957 1233 aa9.17□□□□□ -0.94
APH1B-209ENST00000560716 TRIM60Q495X7 471 aa9.17□□□□□ -0.94
APH1B-209ENST00000560716 ATF7IPQ6VMQ6 1270 aa9.17□□□□□ -0.94
APH1B-209ENST00000560716 ANKRD33Q7Z3H0 272 aa9.17□□□□□ -0.94
APH1B-209ENST00000560716 CCAR1Q8IX12 1150 aaKnown RBP9.17□□□□□ -0.94
APH1B-209ENST00000560716 USP38Q8NB14 1042 aa9.17□□□□□ -0.94
APH1B-209ENST00000560716 SH3RF3Q8TEJ3 882 aaPredicted RBP9.17□□□□□ -0.94
APH1B-209ENST00000560716 GPR108Q9NPR9 543 aa9.17□□□□□ -0.94
APH1B-209ENST00000560716 BTBD7Q9P203 1132 aa9.17□□□□□ -0.94
APH1B-209ENST00000560716 PA2G4Q9UQ80 394 aaKnown RBP9.17□□□□□ -0.94
APH1B-209ENST00000560716 ATP11BQ9Y2G3 1177 aa9.17□□□□□ -0.94
APH1B-209ENST00000560716 MYO9BQ13459 2157 aa9.17□□□□□ -0.94
APH1B-209ENST00000560716 REV3LO60673 3130 aa9.17□□□□□ -0.94
APH1B-209ENST00000560716 SPDYE16A6NNV3 312 aaPredicted RBP9.16□□□□□ -0.94
APH1B-209ENST00000560716 CT47B1P0C2W7 299 aaPredicted RBP9.16□□□□□ -0.94
APH1B-209ENST00000560716 VCAM1P19320 739 aa9.16□□□□□ -0.94
APH1B-209ENST00000560716 DNAJB2P25686 324 aa9.16□□□□□ -0.94
APH1B-209ENST00000560716 ITGB8P26012 769 aa9.16□□□□□ -0.94
APH1B-209ENST00000560716 CYP2C19P33261 490 aa9.16□□□□□ -0.94
APH1B-209ENST00000560716 MCAMP43121 646 aa9.16□□□□□ -0.94
APH1B-209ENST00000560716 EPHB4P54760 987 aa9.16□□□□□ -0.94
APH1B-209ENST00000560716 LRRC41Q15345 812 aa9.16□□□□□ -0.94
APH1B-209ENST00000560716 SHROOM1Q2M3G4 852 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms