RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 PSMD6Q15008 389 aa14.61□□□□□ -0.07
CSPG4P11-201ENST00000560634 LPIN2Q92539 896 aa14.61□□□□□ -0.07
CSPG4P11-201ENST00000560634 DSCC1Q9BVC3 393 aa14.61□□□□□ -0.07
CSPG4P11-201ENST00000560634 NCAPH2Q6IBW4 605 aa14.61□□□□□ -0.07
CSPG4P11-201ENST00000560634 WDR7Q9Y4E6 1490 aa14.61□□□□□ -0.07
CSPG4P11-201ENST00000560634 STX2P32856 288 aa14.61□□□□□ -0.07
CSPG4P11-201ENST00000560634 YWHAEP62258 255 aaKnown RBP14.61□□□□□ -0.07
CSPG4P11-201ENST00000560634 CALCRLQ16602 461 aa14.61□□□□□ -0.07
CSPG4P11-201ENST00000560634 NBPF14Q5TI25 921 aa14.61□□□□□ -0.07
CSPG4P11-201ENST00000560634 FAM89AQ96GI7 184 aa14.61□□□□□ -0.07
CSPG4P11-201ENST00000560634 STAT1P42224 750 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 OTUD7BQ6GQQ9 843 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 NSMCE1Q8WV22 266 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 FAM227BQ96M60 508 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 XPO4Q9C0E2 1151 aaKnown RBP14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 PKD2L1Q9P0L9 805 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 KIAA1468Q9P260 1216 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 MCTP2Q6DN12 878 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 ZNF790Q6PG37 636 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 MYCT1Q8N699 235 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 TRIML1Q8N9V2 468 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 RIMBP2O15034 1052 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 TCP1P17987 556 aaKnown RBP14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 SLC1A4P43007 532 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 ZSCAN26Q16670 478 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 MYSM1Q5VVJ2 828 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 G2E3Q7L622 706 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 OTUD7AQ8TE49 926 aaPredicted RBP14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 KLHL14Q9P2G3 628 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 BAIAP2L1Q9UHR4 511 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 CHL1O00533 1208 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 RRAGAQ7L523 313 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 HAUS4Q9H6D7 363 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 HYOU1Q9Y4L1 999 aa14.6□□□□□ -0.07
CSPG4P11-201ENST00000560634 CD19P15391 556 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 NPC1L1Q9UHC9 1359 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 GOLGA8KD6RF30 607 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 HOXC9P31274 260 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 DNM2P50570 870 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 ETF1P62495 437 aaKnown RBP14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 CCDC89Q8N998 374 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 SLC12A2P55011 1212 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 RBM26Q5T8P6 1007 aaKnown RBP14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 REXO1Q8N1G1 1221 aaKnown RBP14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 HOOK2Q96ED9 719 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 RIC8AQ9NPQ8 531 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 SAP30BPQ9UHR5 308 aaKnown RBP14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 USTQ9Y2C2 406 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 AFG3L2Q9Y4W6 797 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 HIP1RO75146 1068 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 APBA1Q02410 837 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 LONRF2Q1L5Z9 754 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 CDC37L1Q7L3B6 337 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 DYMQ7RTS9 669 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 TEKT1Q969V4 418 aa14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 ZNF274Q96GC6 653 aaPredicted RBP14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 PPANQ9NQ55 473 aaKnown RBP14.59□□□□□ -0.07
CSPG4P11-201ENST00000560634 MAP3K19Q56UN5 1328 aa14.58□□□□□ -0.07
CSPG4P11-201ENST00000560634 KDM3AQ9Y4C1 1321 aa14.58□□□□□ -0.07
CSPG4P11-201ENST00000560634 GADD45BO75293 160 aaPredicted RBP14.58□□□□□ -0.07
CSPG4P11-201ENST00000560634 CTNNA1P35221 906 aaKnown RBP14.58□□□□□ -0.07
CSPG4P11-201ENST00000560634 MRPL44Q9H9J2 332 aaKnown RBP14.58□□□□□ -0.07
CSPG4P11-201ENST00000560634 RIMS2Q9UQ26 1411 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 EFCAB8A8MWE9 144 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 GCNT3O95395 438 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 C2CD5Q86YS7 1000 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 CDCA7Q9BWT1 371 aaPredicted RBP14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 VPS37BQ9H9H4 285 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 MED4Q9NPJ6 270 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 TXNDC9O14530 226 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 PRDM1O75626 825 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 CNBD1Q8NA66 436 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 GRK7Q8WTQ7 553 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 PSMB7Q99436 277 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 C19orf44Q9H6X5 657 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 PICK1Q9NRD5 415 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 FAM207AQ9NSI2 230 aaPredicted RBP14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 GPATCH8Q9UKJ3 1502 aaKnown RBP14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 TOM1O60784 492 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 UFL1O94874 794 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 PHBP35232 272 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 TYW1BQ6NUM6 668 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 MRFAP1L1Q96HT8 127 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 RILPQ96NA2 401 aa14.58□□□□□ -0.08
CSPG4P11-201ENST00000560634 KIF24Q5T7B8 1368 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 TRPM2O94759 1503 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 NOP56O00567 594 aaKnown RBP14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 ZNF500O60304 480 aaPredicted RBP14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 ATP5JP18859 108 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 CASC4Q6P4E1 433 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 C17orf53Q8N3J3 647 aaPredicted RBP14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 CARD14Q9BXL6 1004 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 TBC1D8O95759 1140 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 P4HA1P13674 534 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 TRAPPC3LQ5T215 181 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 PHKBQ93100 1093 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 BCL2L12Q9HB09 334 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 FAM114A2Q9NRY5 505 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms