RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 FSD1Q9BTV5 496 aa17.62■□□□□ 0.41
PSME1-207ENST00000560420 PTCH2Q9Y6C5 1203 aa17.62■□□□□ 0.41
PSME1-207ENST00000560420 AKR1B1P15121 316 aa17.61■□□□□ 0.41
PSME1-207ENST00000560420 GNAT2P19087 354 aa17.61■□□□□ 0.41
PSME1-207ENST00000560420 PSMC4P43686 418 aa17.61■□□□□ 0.41
PSME1-207ENST00000560420 PRMT2P55345 433 aa17.61■□□□□ 0.41
PSME1-207ENST00000560420 PABPC4Q13310 644 aaKnown RBP eCLIP17.61■□□□□ 0.411e-6■■■■□ 19.6
PSME1-207ENST00000560420 ARHGEF6Q15052 776 aa17.61■□□□□ 0.41
PSME1-207ENST00000560420 USP17L2Q6R6M4 530 aa17.61■□□□□ 0.41
PSME1-207ENST00000560420 TMEM179Q6ZVK1 233 aa17.61■□□□□ 0.41
PSME1-207ENST00000560420 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.61■□□□□ 0.41
PSME1-207ENST00000560420 MORF4L1Q9UBU8 362 aa17.61■□□□□ 0.41
PSME1-207ENST00000560420 SRRDQ9UH36 339 aa17.61■□□□□ 0.41
PSME1-207ENST00000560420 TNRC18O15417 2968 aaPredicted RBP17.61■□□□□ 0.41
PSME1-207ENST00000560420 OSBPP22059 807 aa17.6■□□□□ 0.41
PSME1-207ENST00000560420 GCLCP48506 637 aaPredicted RBP17.6■□□□□ 0.41
PSME1-207ENST00000560420 RAB3GAP1Q15042 981 aa17.6■□□□□ 0.41
PSME1-207ENST00000560420 SMCR8Q8TEV9 937 aaPredicted RBP17.6■□□□□ 0.41
PSME1-207ENST00000560420 CCDC17Q96LX7 622 aa17.6■□□□□ 0.41
PSME1-207ENST00000560420 CABP5Q9NP86 173 aa17.6■□□□□ 0.41
PSME1-207ENST00000560420 TMOD4Q9NZQ9 345 aa17.6■□□□□ 0.41
PSME1-207ENST00000560420 RLFQ13129 1914 aa17.6■□□□□ 0.41
PSME1-207ENST00000560420 A0A0G2JMZ2 1700 aa17.59■□□□□ 0.41
PSME1-207ENST00000560420 PATL2C9JE40 543 aaKnown RBP17.59■□□□□ 0.41
PSME1-207ENST00000560420 VCAM1P19320 739 aa17.59■□□□□ 0.41
PSME1-207ENST00000560420 KIF22Q14807 665 aa17.59■□□□□ 0.41
PSME1-207ENST00000560420 B4GALNT3Q6L9W6 998 aa17.59■□□□□ 0.41
PSME1-207ENST00000560420 ZNF333Q96JL9 665 aa17.59■□□□□ 0.41
PSME1-207ENST00000560420 ZBTB47Q9UFB7 747 aaPredicted RBP17.59■□□□□ 0.41
PSME1-207ENST00000560420 RASA1P20936 1047 aa17.58■□□□□ 0.4
PSME1-207ENST00000560420 USP14P54578 494 aa17.58■□□□□ 0.4
PSME1-207ENST00000560420 HERVK_113P62684 666 aa17.58■□□□□ 0.4
PSME1-207ENST00000560420 IRX6P78412 446 aaPredicted RBP17.58■□□□□ 0.4
PSME1-207ENST00000560420 KIAA1755Q5JYT7 1200 aa17.58■□□□□ 0.4
PSME1-207ENST00000560420 LBX2Q6XYB7 198 aa17.58■□□□□ 0.4
PSME1-207ENST00000560420 CLEC10AQ8IUN9 316 aa17.58■□□□□ 0.4
PSME1-207ENST00000560420 IFNL3Q8IZI9 196 aa17.58■□□□□ 0.4
PSME1-207ENST00000560420 ANKRD13CQ8N6S4 541 aa17.58■□□□□ 0.4
PSME1-207ENST00000560420 DDRGK1Q96HY6 314 aa17.58■□□□□ 0.4
PSME1-207ENST00000560420 P2RX7Q99572 595 aaKnown RBP17.58■□□□□ 0.4
PSME1-207ENST00000560420 TXNRD2Q9NNW7 524 aa17.58■□□□□ 0.4
PSME1-207ENST00000560420 PLXNB2O15031 1838 aa17.57■□□□□ 0.4
PSME1-207ENST00000560420 PDE4AP27815 886 aa17.57■□□□□ 0.4
PSME1-207ENST00000560420 FCGRTP55899 365 aa17.57■□□□□ 0.4
PSME1-207ENST00000560420 SOX10P56693 466 aa17.57■□□□□ 0.4
PSME1-207ENST00000560420 CCDC129Q6ZRS4 1044 aa17.57■□□□□ 0.4
PSME1-207ENST00000560420 AMOTL1Q8IY63 956 aa17.57■□□□□ 0.4
PSME1-207ENST00000560420 TMX2Q9Y320 296 aa17.57■□□□□ 0.4
PSME1-207ENST00000560420 PARP14Q460N5 1801 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 PLIN4Q96Q06 1357 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 MYPNQ86TC9 1320 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 DOCK3Q8IZD9 2030 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 IGKV6D-41A0A0C4DH26 115 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 A0A0D9SFI3 127 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 CNMDO75829 334 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 IRX3P78415 501 aaPredicted RBP17.56■□□□□ 0.4
PSME1-207ENST00000560420 PRKCZQ05513 592 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 CATSPERGQ6ZRH7 1159 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 FAM227BQ96M60 508 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 FEZ1Q99689 392 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 HELLSQ9NRZ9 838 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 RBPJLQ9UBG7 517 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 GABRQQ9UN88 632 aa17.56■□□□□ 0.4
PSME1-207ENST00000560420 USP17L15C9J2P7 530 aa17.55■□□□□ 0.4
PSME1-207ENST00000560420 USP17L13C9JLJ4 530 aa17.55■□□□□ 0.4
PSME1-207ENST00000560420 USP17L11C9JVI0 530 aa17.55■□□□□ 0.4
PSME1-207ENST00000560420 USP17L18D6R9N7 530 aa17.55■□□□□ 0.4
PSME1-207ENST00000560420 USP17L22D6RA61 530 aa17.55■□□□□ 0.4
PSME1-207ENST00000560420 USP17L17D6RBQ6 530 aa17.55■□□□□ 0.4
PSME1-207ENST00000560420 USP17L19D6RCP7 530 aa17.55■□□□□ 0.4
PSME1-207ENST00000560420 USP17L20D6RJB6 530 aa17.55■□□□□ 0.4
PSME1-207ENST00000560420 MPHOSPH10O00566 681 aaKnown RBP17.55■□□□□ 0.4
PSME1-207ENST00000560420 FMNL1O95466 1100 aaPredicted RBP17.55■□□□□ 0.4
PSME1-207ENST00000560420 ICA1Q05084 483 aa17.55■□□□□ 0.4
PSME1-207ENST00000560420 USP17L24Q0WX57 530 aa17.55■□□□□ 0.4
PSME1-207ENST00000560420 ZYXQ15942 572 aaKnown RBP17.55■□□□□ 0.4
PSME1-207ENST00000560420 VPS53Q5VIR6 699 aa17.55■□□□□ 0.4
PSME1-207ENST00000560420 GTF3C2Q8WUA4 911 aaPredicted RBP17.55■□□□□ 0.4
PSME1-207ENST00000560420 PEX10O60683 326 aa17.54■□□□□ 0.4
PSME1-207ENST00000560420 HOXD10P28358 340 aa17.54■□□□□ 0.4
PSME1-207ENST00000560420 TDO2P48775 406 aa17.54■□□□□ 0.4
PSME1-207ENST00000560420 IRF5Q13568 498 aa17.54■□□□□ 0.4
PSME1-207ENST00000560420 ALX1Q15699 326 aa17.54■□□□□ 0.4
PSME1-207ENST00000560420 ZNF589Q86UQ0 364 aaPredicted RBP17.54■□□□□ 0.4
PSME1-207ENST00000560420 VCPKMTQ9H867 229 aa17.54■□□□□ 0.4
PSME1-207ENST00000560420 KANSL2Q9H9L4 492 aa17.54■□□□□ 0.4
PSME1-207ENST00000560420 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.54■□□□□ 0.4
PSME1-207ENST00000560420 ZMYM6O95789 1325 aa17.53■□□□□ 0.4
PSME1-207ENST00000560420 POTEFA5A3E0 1075 aa17.53■□□□□ 0.4
PSME1-207ENST00000560420 SPDYE16A6NNV3 312 aaPredicted RBP17.53■□□□□ 0.4
PSME1-207ENST00000560420 SLC9C1Q4G0N8 1177 aa17.53■□□□□ 0.4
PSME1-207ENST00000560420 LPAR1Q92633 364 aa17.53■□□□□ 0.4
PSME1-207ENST00000560420 RPAP3Q9H6T3 665 aaPredicted RBP17.53■□□□□ 0.4
PSME1-207ENST00000560420 ANAPC4Q9UJX5 808 aa17.53■□□□□ 0.4
PSME1-207ENST00000560420 GJD2Q9UKL4 321 aa17.53■□□□□ 0.4
PSME1-207ENST00000560420 TACC3Q9Y6A5 838 aa17.53■□□□□ 0.4
PSME1-207ENST00000560420 MINDY4BA8MYZ0 360 aa17.52■□□□□ 0.4
PSME1-207ENST00000560420 TNPO2O14787 897 aaKnown RBP17.52■□□□□ 0.4
PSME1-207ENST00000560420 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.4
PSME1-207ENST00000560420 EEF2P13639 858 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms