RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 OTOFQ9HC10 1997 aa16.88■□□□□ 0.29
SMAD6-204ENST00000559931 PRC1O43663 620 aa16.88■□□□□ 0.29
SMAD6-204ENST00000559931 CPA1P15085 419 aa16.88■□□□□ 0.29
SMAD6-204ENST00000559931 RBM25P49756 843 aaKnown RBP16.88■□□□□ 0.29
SMAD6-204ENST00000559931 ICA1Q05084 483 aa16.88■□□□□ 0.29
SMAD6-204ENST00000559931 PPP4R3BQ5MIZ7 849 aa16.88■□□□□ 0.29
SMAD6-204ENST00000559931 ERO1BQ86YB8 467 aa16.88■□□□□ 0.29
SMAD6-204ENST00000559931 MB21D2Q8IYB1 491 aaPredicted RBP16.88■□□□□ 0.29
SMAD6-204ENST00000559931 NKX2-3Q8TAU0 364 aa16.88■□□□□ 0.29
SMAD6-204ENST00000559931 OTUD5Q96G74 571 aa16.88■□□□□ 0.29
SMAD6-204ENST00000559931 CEP95Q96GE4 821 aa16.88■□□□□ 0.29
SMAD6-204ENST00000559931 ZSCAN10Q96SZ4 725 aaPredicted RBP16.88■□□□□ 0.29
SMAD6-204ENST00000559931 ARHGEF10LQ9HCE6 1279 aa16.88■□□□□ 0.29
SMAD6-204ENST00000559931 CLIP2Q9UDT6 1046 aa16.88■□□□□ 0.29
SMAD6-204ENST00000559931 STX8Q9UNK0 236 aa16.88■□□□□ 0.29
SMAD6-204ENST00000559931 RAD21O60216 631 aa16.87■□□□□ 0.29
SMAD6-204ENST00000559931 EEF2P13639 858 aaKnown RBP16.87■□□□□ 0.29
SMAD6-204ENST00000559931 GUCY1A2P33402 732 aa16.87■□□□□ 0.29
SMAD6-204ENST00000559931 TMEM67Q5HYA8 995 aa16.87■□□□□ 0.29
SMAD6-204ENST00000559931 RGMBQ6NW40 437 aa16.87■□□□□ 0.29
SMAD6-204ENST00000559931 CLEC10AQ8IUN9 316 aa16.87■□□□□ 0.29
SMAD6-204ENST00000559931 OPTNQ96CV9 577 aa16.87■□□□□ 0.29
SMAD6-204ENST00000559931 TBC1D32Q96NH3 1257 aa16.87■□□□□ 0.29
SMAD6-204ENST00000559931 FEZ1Q99689 392 aa16.87■□□□□ 0.29
SMAD6-204ENST00000559931 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMAD6-204ENST00000559931 UPF3BQ9BZI7 483 aaKnown RBP16.87■□□□□ 0.29
SMAD6-204ENST00000559931 TM6SF1Q9BZW5 370 aa16.87■□□□□ 0.29
SMAD6-204ENST00000559931 IL17RBQ9NRM6 502 aa16.87■□□□□ 0.29
SMAD6-204ENST00000559931 TCP11L1Q9NUJ3 509 aa16.87■□□□□ 0.29
SMAD6-204ENST00000559931 MTMR4Q9NYA4 1195 aa16.87■□□□□ 0.29
SMAD6-204ENST00000559931 RASSF10A6NK89 507 aa16.86■□□□□ 0.29
SMAD6-204ENST00000559931 TTLL1O95922 423 aa16.86■□□□□ 0.29
SMAD6-204ENST00000559931 RPS6KB1P23443 525 aa16.86■□□□□ 0.29
SMAD6-204ENST00000559931 PPATQ06203 517 aa16.86■□□□□ 0.29
SMAD6-204ENST00000559931 MKRN3Q13064 507 aaKnown RBP16.86■□□□□ 0.29
SMAD6-204ENST00000559931 SPP2Q13103 211 aa16.86■□□□□ 0.29
SMAD6-204ENST00000559931 CYP4F22Q6NT55 531 aa16.86■□□□□ 0.29
SMAD6-204ENST00000559931 RUFY3Q7L099 469 aa16.86■□□□□ 0.29
SMAD6-204ENST00000559931 DNAJC5GQ8N7S2 189 aa16.86■□□□□ 0.29
SMAD6-204ENST00000559931 ZNF280CQ8ND82 737 aa16.86■□□□□ 0.29
SMAD6-204ENST00000559931 CNKSR2Q8WXI2 1034 aa16.86■□□□□ 0.29
SMAD6-204ENST00000559931 TCEANC2Q96MN5 208 aa16.86■□□□□ 0.29
SMAD6-204ENST00000559931 LRRC2Q9BYS8 371 aa16.86■□□□□ 0.29
SMAD6-204ENST00000559931 ZSWIM6Q9HCJ5 1215 aa16.86■□□□□ 0.29
SMAD6-204ENST00000559931 SPDYE5A6NIY4 337 aa16.85■□□□□ 0.29
SMAD6-204ENST00000559931 TRIM75PA6NK02 468 aa16.85■□□□□ 0.29
SMAD6-204ENST00000559931 VEGFBP49765 207 aa16.85■□□□□ 0.29
SMAD6-204ENST00000559931 ANTXR2P58335 489 aa16.85■□□□□ 0.29
SMAD6-204ENST00000559931 WTAPQ15007 396 aa16.85■□□□□ 0.29
SMAD6-204ENST00000559931 NFXL1Q6ZNB6 911 aa16.85■□□□□ 0.29
SMAD6-204ENST00000559931 TMEM87BQ96K49 555 aa16.85■□□□□ 0.29
SMAD6-204ENST00000559931 TTC14Q96N46 770 aa16.85■□□□□ 0.29
SMAD6-204ENST00000559931 TBC1D2Q9BYX2 928 aa16.85■□□□□ 0.29
SMAD6-204ENST00000559931 SH2D4AQ9H788 454 aa16.85■□□□□ 0.29
SMAD6-204ENST00000559931 PDRG1Q9NUG6 133 aa16.85■□□□□ 0.29
SMAD6-204ENST00000559931 NYAP2Q9P242 653 aa16.85■□□□□ 0.29
SMAD6-204ENST00000559931 TNKSO95271 1327 aa16.85■□□□□ 0.29
SMAD6-204ENST00000559931 MYH4Q9Y623 1939 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 IGKV6D-41A0A0C4DH26 115 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 USP17L10C9JJH3 530 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 NEK4P51957 841 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 EXOSC10Q01780 885 aaKnown RBP16.84■□□□□ 0.29
SMAD6-204ENST00000559931 PPIL2Q13356 520 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 COL9A3Q14050 684 aaPredicted RBP16.84■□□□□ 0.29
SMAD6-204ENST00000559931 ZYXQ15942 572 aaKnown RBP16.84■□□□□ 0.29
SMAD6-204ENST00000559931 IFIT1BQ5T764 474 aaKnown RBP16.84■□□□□ 0.29
SMAD6-204ENST00000559931 DGKHQ86XP1 1220 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 ENAHQ8N8S7 591 aaPredicted RBP16.84■□□□□ 0.29
SMAD6-204ENST00000559931 ACER1Q8TDN7 264 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 CCDC102AQ96A19 550 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 WNK4Q96J92 1243 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 WDR18Q9BV38 432 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 KAT14Q9H8E8 782 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 MTMR7Q9Y216 660 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 AFG3L2Q9Y4W6 797 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 PLIN4Q96Q06 1357 aa16.84■□□□□ 0.29
SMAD6-204ENST00000559931 IRF6O14896 467 aa16.83■□□□□ 0.28
SMAD6-204ENST00000559931 TOP1P11387 765 aaKnown RBP16.83■□□□□ 0.28
SMAD6-204ENST00000559931 ECE1P42892 770 aa16.83■□□□□ 0.28
SMAD6-204ENST00000559931 SPRYD7Q5W111 196 aa16.83■□□□□ 0.28
SMAD6-204ENST00000559931 Q6ZUG5 572 aa16.83■□□□□ 0.28
SMAD6-204ENST00000559931 SIAH1Q8IUQ4 282 aa16.83■□□□□ 0.28
SMAD6-204ENST00000559931 TMTC2Q8N394 836 aa16.83■□□□□ 0.28
SMAD6-204ENST00000559931 WDR19Q8NEZ3 1342 aa16.83■□□□□ 0.28
SMAD6-204ENST00000559931 IGDCC4Q8TDY8 1250 aa16.83■□□□□ 0.28
SMAD6-204ENST00000559931 CHMP4CQ96CF2 233 aa16.83■□□□□ 0.28
SMAD6-204ENST00000559931 HHIPL1Q96JK4 782 aa16.83■□□□□ 0.28
SMAD6-204ENST00000559931 CAPNS2Q96L46 248 aa16.83■□□□□ 0.28
SMAD6-204ENST00000559931 NAP1L2Q9ULW6 460 aaPredicted RBP16.83■□□□□ 0.28
SMAD6-204ENST00000559931 WDR33Q9C0J8 1336 aaKnown RBP16.82■□□□□ 0.28
SMAD6-204ENST00000559931 CCDC69A6NI79 296 aa16.82■□□□□ 0.28
SMAD6-204ENST00000559931 AOC2O75106 756 aa16.82■□□□□ 0.28
SMAD6-204ENST00000559931 MTMR2Q13614 643 aa16.82■□□□□ 0.28
SMAD6-204ENST00000559931 RABEP1Q15276 862 aa16.82■□□□□ 0.28
SMAD6-204ENST00000559931 LRRC47Q8N1G4 583 aaKnown RBP16.82■□□□□ 0.28
SMAD6-204ENST00000559931 TMEM47Q9BQJ4 181 aa16.82■□□□□ 0.28
SMAD6-204ENST00000559931 MTA3Q9BTC8 594 aa16.82■□□□□ 0.28
SMAD6-204ENST00000559931 GOPCQ9HD26 462 aa16.82■□□□□ 0.28
SMAD6-204ENST00000559931 GPHNQ9NQX3 736 aaPredicted RBP16.82■□□□□ 0.28
SMAD6-204ENST00000559931 TMOD4Q9NZQ9 345 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms