RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.24□□□□□ -0.45
TPM1-221ENST00000559831 DAXXQ9UER7 740 aaPredicted RBP12.24□□□□□ -0.45
TPM1-221ENST00000559831 TPCN1Q9ULQ1 816 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 STX8Q9UNK0 236 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 LIMCH1Q9UPQ0 1083 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 GOLGA8BA8MQT2 603 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 PHF20L1A8MW92 1017 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 TRAF5O00463 557 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 LARGE1O95461 756 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 YY1P25490 414 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 INPP5BP32019 993 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 CAP2P40123 477 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 LIFRP42702 1097 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 SLC4A3P48751 1232 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 JAG1P78504 1218 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 SYNE3Q6ZMZ3 975 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 FBXL16Q8N461 479 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 TMX3Q96JJ7 454 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 ZSCAN31Q96LW9 406 aaPredicted RBP12.23□□□□□ -0.45
TPM1-221ENST00000559831 MYL10Q9BUA6 226 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 KAT14Q9H8E8 782 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 ZNF408Q9H9D4 720 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.23□□□□□ -0.45
TPM1-221ENST00000559831 BRPF3Q9ULD4 1205 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 ZBTB21Q9ULJ3 1066 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 MTMR7Q9Y216 660 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 SLC12A7Q9Y666 1083 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 PAPPA2Q9BXP8 1791 aa12.23□□□□□ -0.45
TPM1-221ENST00000559831 MYH6P13533 1939 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 IGKV6D-41A0A0C4DH26 115 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 PPP1R12BO60237 982 aaPredicted RBP12.22□□□□□ -0.45
TPM1-221ENST00000559831 CTNND1O60716 968 aaKnown RBP12.22□□□□□ -0.45
TPM1-221ENST00000559831 GUCY1A2P33402 732 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 CCT2P78371 535 aaKnown RBP12.22□□□□□ -0.45
TPM1-221ENST00000559831 ICA1Q05084 483 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 FMR1Q06787 632 aaKnown RBP eCLIP12.22□□□□□ -0.45
TPM1-221ENST00000559831 ME3Q16798 604 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 RCSD1Q6JBY9 416 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 CHADLQ6NUI6 762 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 CATIPQ7Z7H3 387 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 SGMS1Q86VZ5 419 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 MICU3Q86XE3 530 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 DGKHQ86XP1 1220 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 CCDC144CPQ8IYA2 1237 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 ZNF654Q8IZM8 581 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 TMTC2Q8N394 836 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 NECAB1Q8N987 351 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 SPRYD3Q8NCJ5 442 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 NUP133Q8WUM0 1156 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 CHMP4CQ96CF2 233 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 SLKQ9H2G2 1235 aaPredicted RBP12.22□□□□□ -0.45
TPM1-221ENST00000559831 FOXD4L1Q9NU39 408 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 MTMR4Q9NYA4 1195 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 CLIP2Q9UDT6 1046 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 PHIPQ8WWQ0 1821 aa12.22□□□□□ -0.45
TPM1-221ENST00000559831 GOLGA8AA7E2F4 631 aa12.21□□□□□ -0.45
TPM1-221ENST00000559831 ZBTB43O43298 467 aa12.21□□□□□ -0.45
TPM1-221ENST00000559831 USP2O75604 605 aaPredicted RBP12.21□□□□□ -0.45
TPM1-221ENST00000559831 TTLL1O95922 423 aa12.21□□□□□ -0.45
TPM1-221ENST00000559831 HSP90AA1P07900 732 aaKnown RBP12.21□□□□□ -0.45
TPM1-221ENST00000559831 TOP1P11387 765 aaKnown RBP12.21□□□□□ -0.45
TPM1-221ENST00000559831 EEF2P13639 858 aaKnown RBP12.21□□□□□ -0.45
TPM1-221ENST00000559831 RXRAP19793 462 aa12.21□□□□□ -0.45
TPM1-221ENST00000559831 IREB2P48200 963 aaKnown RBP12.21□□□□□ -0.45
TPM1-221ENST00000559831 PPP4R3BQ5MIZ7 849 aa12.21□□□□□ -0.45
TPM1-221ENST00000559831 APOA5Q6Q788 366 aa12.21□□□□□ -0.45
TPM1-221ENST00000559831 CCDC84Q86UT8 332 aaPredicted RBP12.21□□□□□ -0.45
TPM1-221ENST00000559831 CCDC83Q8IWF9 413 aa12.21□□□□□ -0.45
TPM1-221ENST00000559831 LRRC47Q8N1G4 583 aaKnown RBP12.21□□□□□ -0.45
TPM1-221ENST00000559831 ZKSCAN4Q969J2 545 aaPredicted RBP12.21□□□□□ -0.45
TPM1-221ENST00000559831 KLRG1Q96E93 195 aa12.21□□□□□ -0.45
TPM1-221ENST00000559831 ZNF274Q96GC6 653 aaPredicted RBP12.21□□□□□ -0.45
TPM1-221ENST00000559831 TMEM47Q9BQJ4 181 aa12.21□□□□□ -0.45
TPM1-221ENST00000559831 KANSL2Q9H9L4 492 aa12.21□□□□□ -0.45
TPM1-221ENST00000559831 PICK1Q9NRD5 415 aa12.21□□□□□ -0.45
TPM1-221ENST00000559831 SH2B1Q9NRF2 756 aaPredicted RBP12.21□□□□□ -0.45
TPM1-221ENST00000559831 ZNF112Q9UJU3 913 aa12.21□□□□□ -0.45
TPM1-221ENST00000559831 RAD21O60216 631 aa12.2□□□□□ -0.46
TPM1-221ENST00000559831 PFKFB2O60825 505 aa12.2□□□□□ -0.46
TPM1-221ENST00000559831 ASNSP08243 561 aa12.2□□□□□ -0.46
TPM1-221ENST00000559831 PDIA3P30101 505 aaKnown RBP12.2□□□□□ -0.46
TPM1-221ENST00000559831 METAP2P50579 478 aaKnown RBP eCLIP12.2□□□□□ -0.46
TPM1-221ENST00000559831 MOB2Q70IA6 237 aa12.2□□□□□ -0.46
TPM1-221ENST00000559831 ARMC9Q7Z3E5 817 aa12.2□□□□□ -0.46
TPM1-221ENST00000559831 SCYL3Q8IZE3 742 aa12.2□□□□□ -0.46
TPM1-221ENST00000559831 PNMA1Q8ND90 353 aa12.2□□□□□ -0.46
TPM1-221ENST00000559831 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.2□□□□□ -0.46
TPM1-221ENST00000559831 ANKS1AQ92625 1134 aa12.2□□□□□ -0.46
TPM1-221ENST00000559831 IPO9Q96P70 1041 aaKnown RBP12.2□□□□□ -0.46
TPM1-221ENST00000559831 ARHGEF10LQ9HCE6 1279 aa12.2□□□□□ -0.46
TPM1-221ENST00000559831 DDAH1O94760 285 aa12.19□□□□□ -0.46
TPM1-221ENST00000559831 CELF2O95319 508 aaKnown RBP12.19□□□□□ -0.46
TPM1-221ENST00000559831 EVCP57679 992 aa12.19□□□□□ -0.46
TPM1-221ENST00000559831 MAP3K9P80192 1104 aa12.19□□□□□ -0.46
TPM1-221ENST00000559831 SCRN1Q12765 414 aa12.19□□□□□ -0.46
TPM1-221ENST00000559831 NCOA5Q9HCD5 579 aaKnown RBP12.19□□□□□ -0.46
TPM1-221ENST00000559831 GINM1Q9NU53 330 aa12.19□□□□□ -0.46
TPM1-221ENST00000559831 NYAP2Q9P242 653 aa12.19□□□□□ -0.46
TPM1-221ENST00000559831 HPS5Q9UPZ3 1129 aa12.19□□□□□ -0.46
TPM1-221ENST00000559831 CSADQ9Y600 493 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms