RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 PRPF3O43395 683 aaKnown RBP11.49□□□□□ -0.57
LRRC28-216ENST00000559819 VEGFAP15692 232 aaPredicted RBP11.49□□□□□ -0.57
LRRC28-216ENST00000559819 PRDX5P30044 214 aa11.49□□□□□ -0.57
LRRC28-216ENST00000559819 FAM98CQ17RN3 349 aaKnown RBP11.49□□□□□ -0.57
LRRC28-216ENST00000559819 HOOK1Q9UJC3 728 aaKnown RBP11.49□□□□□ -0.57
LRRC28-216ENST00000559819 CEP131Q9UPN4 1083 aa11.49□□□□□ -0.57
LRRC28-216ENST00000559819 MYH2Q9UKX2 1941 aa11.48□□□□□ -0.57
LRRC28-216ENST00000559819 ELF2Q15723 593 aa11.48□□□□□ -0.57
LRRC28-216ENST00000559819 NT5DC1Q5TFE4 455 aa11.48□□□□□ -0.57
LRRC28-216ENST00000559819 FBXO33Q7Z6M2 555 aa11.48□□□□□ -0.57
LRRC28-216ENST00000559819 SRBD1Q8N5C6 995 aaKnown RBP11.48□□□□□ -0.57
LRRC28-216ENST00000559819 ZNF579Q8NAF0 562 aaKnown RBP11.48□□□□□ -0.57
LRRC28-216ENST00000559819 SCN7AQ01118 1682 aa11.48□□□□□ -0.57
LRRC28-216ENST00000559819 CDK11BP21127 795 aaKnown RBP11.48□□□□□ -0.57
LRRC28-216ENST00000559819 NPY5RQ15761 445 aa11.48□□□□□ -0.57
LRRC28-216ENST00000559819 TMTC3Q6ZXV5 915 aa11.48□□□□□ -0.57
LRRC28-216ENST00000559819 TXNRD3Q86VQ6 643 aa11.48□□□□□ -0.57
LRRC28-216ENST00000559819 IQCA1Q86XH1 822 aa11.48□□□□□ -0.57
LRRC28-216ENST00000559819 ELOA2Q8IYF1 753 aaPredicted RBP11.48□□□□□ -0.57
LRRC28-216ENST00000559819 SYMPKQ92797 1274 aaKnown RBP11.48□□□□□ -0.57
LRRC28-216ENST00000559819 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.48□□□□□ -0.57
LRRC28-216ENST00000559819 CNTNAP5Q8WYK1 1306 aa11.48□□□□□ -0.57
LRRC28-216ENST00000559819 SLU7O95391 586 aaKnown RBP11.47□□□□□ -0.57
LRRC28-216ENST00000559819 XBP1P17861 261 aa11.47□□□□□ -0.57
LRRC28-216ENST00000559819 STX17P56962 302 aa11.47□□□□□ -0.57
LRRC28-216ENST00000559819 HOMER1Q86YM7 354 aa11.47□□□□□ -0.57
LRRC28-216ENST00000559819 SMYD4Q8IYR2 804 aaPredicted RBP11.47□□□□□ -0.57
LRRC28-216ENST00000559819 STAMQ92783 540 aa11.47□□□□□ -0.57
LRRC28-216ENST00000559819 TMX1Q9H3N1 280 aa11.47□□□□□ -0.57
LRRC28-216ENST00000559819 DCP1AQ9NPI6 582 aaPredicted RBP11.47□□□□□ -0.57
LRRC28-216ENST00000559819 FANCGO15287 622 aa11.47□□□□□ -0.57
LRRC28-216ENST00000559819 NRDCO43847 1150 aa11.47□□□□□ -0.57
LRRC28-216ENST00000559819 COBLO75128 1261 aa11.47□□□□□ -0.57
LRRC28-216ENST00000559819 FGRP09769 529 aa11.47□□□□□ -0.57
LRRC28-216ENST00000559819 CD44P16070 742 aaKnown RBP11.47□□□□□ -0.57
LRRC28-216ENST00000559819 ZNF18P17022 549 aa11.47□□□□□ -0.57
LRRC28-216ENST00000559819 ADKP55263 362 aaKnown RBP11.47□□□□□ -0.57
LRRC28-216ENST00000559819 RPS8P62241 208 aaKnown RBP11.47□□□□□ -0.57
LRRC28-216ENST00000559819 KLHL10Q6JEL2 608 aa11.47□□□□□ -0.57
LRRC28-216ENST00000559819 TMEM139Q8IV31 216 aa11.47□□□□□ -0.57
LRRC28-216ENST00000559819 RBM28Q9NW13 759 aaKnown RBP11.47□□□□□ -0.57
LRRC28-216ENST00000559819 COL5A3P25940 1745 aaPredicted RBP11.47□□□□□ -0.57
LRRC28-216ENST00000559819 KIF2AO00139 706 aaPredicted RBP11.46□□□□□ -0.57
LRRC28-216ENST00000559819 KCNJ6P48051 423 aa11.46□□□□□ -0.57
LRRC28-216ENST00000559819 BARGINQ6ZT62 677 aa11.46□□□□□ -0.57
LRRC28-216ENST00000559819 AMIGO3Q86WK7 504 aa11.46□□□□□ -0.57
LRRC28-216ENST00000559819 MLKLQ8NB16 471 aa11.46□□□□□ -0.57
LRRC28-216ENST00000559819 TNFRSF25Q93038 417 aa11.46□□□□□ -0.57
LRRC28-216ENST00000559819 ERO1AQ96HE7 468 aa11.46□□□□□ -0.57
LRRC28-216ENST00000559819 CGNQ9P2M7 1197 aaKnown RBP11.46□□□□□ -0.57
LRRC28-216ENST00000559819 DNAI1Q9UI46 699 aa11.46□□□□□ -0.57
LRRC28-216ENST00000559819 CASZ1Q86V15 1759 aa11.46□□□□□ -0.57
LRRC28-216ENST00000559819 MYH6P13533 1939 aa11.46□□□□□ -0.57
LRRC28-216ENST00000559819 VWA3AA6NCI4 1184 aa11.46□□□□□ -0.58
LRRC28-216ENST00000559819 HIBADHP31937 336 aaKnown RBP11.46□□□□□ -0.58
LRRC28-216ENST00000559819 PLCD1P51178 756 aa11.46□□□□□ -0.58
LRRC28-216ENST00000559819 TBX2Q13207 712 aaPredicted RBP11.46□□□□□ -0.58
LRRC28-216ENST00000559819 KMT5BQ4FZB7 885 aa11.46□□□□□ -0.58
LRRC28-216ENST00000559819 TTC38Q5R3I4 469 aa11.46□□□□□ -0.58
LRRC28-216ENST00000559819 REXO1L1PQ8IX06 675 aa11.46□□□□□ -0.58
LRRC28-216ENST00000559819 SMAP1Q8IYB5 467 aaPredicted RBP11.46□□□□□ -0.58
LRRC28-216ENST00000559819 FAM177A1Q8N128 213 aaPredicted RBP11.46□□□□□ -0.58
LRRC28-216ENST00000559819 ENOX1Q8TC92 643 aaKnown RBP11.46□□□□□ -0.58
LRRC28-216ENST00000559819 PAGE5Q96GU1 130 aa11.46□□□□□ -0.58
LRRC28-216ENST00000559819 DDAH1O94760 285 aa11.45□□□□□ -0.58
LRRC28-216ENST00000559819 PPP2R5BQ15173 497 aa11.45□□□□□ -0.58
LRRC28-216ENST00000559819 SLC10A5Q5PT55 438 aa11.45□□□□□ -0.58
LRRC28-216ENST00000559819 NBPF5PQ86XG9 351 aaPredicted RBP11.45□□□□□ -0.58
LRRC28-216ENST00000559819 SPATA20Q8TB22 786 aa11.45□□□□□ -0.58
LRRC28-216ENST00000559819 CRNKL1Q9BZJ0 848 aaKnown RBP11.45□□□□□ -0.58
LRRC28-216ENST00000559819 USP17L8P0C7I0 530 aa11.45□□□□□ -0.58
LRRC28-216ENST00000559819 PTGDRQ13258 359 aa11.45□□□□□ -0.58
LRRC28-216ENST00000559819 TRIM65Q6PJ69 517 aa11.45□□□□□ -0.58
LRRC28-216ENST00000559819 PIK3AP1Q6ZUJ8 805 aa11.45□□□□□ -0.58
LRRC28-216ENST00000559819 CTCFLQ8NI51 663 aaPredicted RBP11.45□□□□□ -0.58
LRRC28-216ENST00000559819 NLRP3Q96P20 1036 aa11.45□□□□□ -0.58
LRRC28-216ENST00000559819 BLZF1Q9H2G9 400 aa11.45□□□□□ -0.58
LRRC28-216ENST00000559819 L2HGDHQ9H9P8 463 aa11.45□□□□□ -0.58
LRRC28-216ENST00000559819 DACH1Q9UI36 760 aa11.45□□□□□ -0.58
LRRC28-216ENST00000559819 TEX33O43247 280 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 MYO1BO43795 1136 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 ORC4O43929 436 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 CALM1P0DP23 149 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 CALM2P0DP24 149 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 CALM3P0DP25 149 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 NLRP5P59047 1200 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 CCDC93Q567U6 631 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 FAM182BQ5T319 152 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 KANK3Q6NY19 840 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 FBXO38Q6PIJ6 1188 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 TOGARAM2Q6ZUX3 1019 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 SH3RF1Q7Z6J0 888 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 TC2NQ8N9U0 490 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 TRIML1Q8N9V2 468 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 SETDB2Q96T68 719 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 BRMS1Q9HCU9 246 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 MYH13Q9UKX3 1938 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 TSPY2A6NKD2 308 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 GNPATO15228 680 aa11.44□□□□□ -0.58
LRRC28-216ENST00000559819 SLFN14P0C7P3 912 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms