RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 USP17L13C9JLJ4 530 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 USP17L11C9JVI0 530 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 USP17L18D6R9N7 530 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 USP17L22D6RA61 530 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 USP17L17D6RBQ6 530 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 USP17L19D6RCP7 530 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 USP17L20D6RJB6 530 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 SRGAP3O43295 1099 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 GH2P01242 217 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 HLA-DOAP06340 250 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 COL9A1P20849 921 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 SMAD3P84022 425 aaKnown RBP13.26□□□□□ -0.29
TRAF3-207ENST00000559734 USP17L24Q0WX57 530 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 SLC39A5Q6ZMH5 540 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 FOXP4Q8IVH2 680 aaPredicted RBP13.26□□□□□ -0.29
TRAF3-207ENST00000559734 TRPV1Q8NER1 839 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 SNRKQ9NRH2 765 aa13.26□□□□□ -0.29
TRAF3-207ENST00000559734 PLCG2P16885 1265 aa13.25□□□□□ -0.29
TRAF3-207ENST00000559734 ARID4AP29374 1257 aaPredicted RBP13.25□□□□□ -0.29
TRAF3-207ENST00000559734 MCAMP43121 646 aa13.25□□□□□ -0.29
TRAF3-207ENST00000559734 ARRDC4Q8NCT1 418 aa13.25□□□□□ -0.29
TRAF3-207ENST00000559734 RNPC3Q96LT9 517 aaKnown RBP13.25□□□□□ -0.29
TRAF3-207ENST00000559734 GINM1Q9NU53 330 aa13.25□□□□□ -0.29
TRAF3-207ENST00000559734 ZNF521Q96K83 1311 aa13.24□□□□□ -0.29
TRAF3-207ENST00000559734 E9PSI1 815 aa13.24□□□□□ -0.29
TRAF3-207ENST00000559734 CYBAP13498 195 aa13.24□□□□□ -0.29
TRAF3-207ENST00000559734 GRB14Q14449 540 aa13.24□□□□□ -0.29
TRAF3-207ENST00000559734 RAB3GAP1Q15042 981 aa13.24□□□□□ -0.29
TRAF3-207ENST00000559734 ALDH1L2Q3SY69 923 aa13.24□□□□□ -0.29
TRAF3-207ENST00000559734 ATF7IPQ6VMQ6 1270 aa13.24□□□□□ -0.29
TRAF3-207ENST00000559734 SH3RF1Q7Z6J0 888 aa13.24□□□□□ -0.29
TRAF3-207ENST00000559734 DPP9Q86TI2 863 aa13.24□□□□□ -0.29
TRAF3-207ENST00000559734 FERMT2Q96AC1 680 aa13.24□□□□□ -0.29
TRAF3-207ENST00000559734 PDLIM7Q9NR12 457 aa13.24□□□□□ -0.29
TRAF3-207ENST00000559734 BTBD7Q9P203 1132 aa13.24□□□□□ -0.29
TRAF3-207ENST00000559734 NOB1Q9ULX3 412 aaKnown RBP13.24□□□□□ -0.29
TRAF3-207ENST00000559734 UQCRFS1P1P0C7P4 283 aa13.23□□□□□ -0.29
TRAF3-207ENST00000559734 VCAM1P19320 739 aa13.23□□□□□ -0.29
TRAF3-207ENST00000559734 ADCYAP1R1P41586 468 aa13.23□□□□□ -0.29
TRAF3-207ENST00000559734 TJAP1Q5JTD0 557 aa13.23□□□□□ -0.29
TRAF3-207ENST00000559734 TTC39AQ5SRH9 613 aa13.23□□□□□ -0.29
TRAF3-207ENST00000559734 CATSPERGQ6ZRH7 1159 aa13.23□□□□□ -0.29
TRAF3-207ENST00000559734 ADGRA1Q86SQ6 560 aa13.23□□□□□ -0.29
TRAF3-207ENST00000559734 C12orf42Q96LP6 360 aa13.23□□□□□ -0.29
TRAF3-207ENST00000559734 API5Q9BZZ5 524 aaKnown RBP13.23□□□□□ -0.29
TRAF3-207ENST00000559734 RAPGEFL1Q9UHV5 662 aa13.23□□□□□ -0.29
TRAF3-207ENST00000559734 TRIM43BA6NCK2 446 aa13.22□□□□□ -0.29
TRAF3-207ENST00000559734 TNFRSF10AO00220 468 aa13.22□□□□□ -0.29
TRAF3-207ENST00000559734 HOXC6P09630 235 aa13.22□□□□□ -0.29
TRAF3-207ENST00000559734 ADORA2AP29274 412 aa13.22□□□□□ -0.29
TRAF3-207ENST00000559734 USP14P54578 494 aa13.22□□□□□ -0.29
TRAF3-207ENST00000559734 DYNLL1P63167 89 aaKnown RBP13.22□□□□□ -0.29
TRAF3-207ENST00000559734 METTL16Q86W50 562 aaKnown RBP13.22□□□□□ -0.29
TRAF3-207ENST00000559734 USP38Q8NB14 1042 aa13.22□□□□□ -0.29
TRAF3-207ENST00000559734 TRIM43Q96BQ3 446 aaPredicted RBP13.22□□□□□ -0.29
TRAF3-207ENST00000559734 RPAP3Q9H6T3 665 aaPredicted RBP13.22□□□□□ -0.29
TRAF3-207ENST00000559734 VCANP13611 3396 aa13.21□□□□□ -0.29
TRAF3-207ENST00000559734 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.29
TRAF3-207ENST00000559734 USP5P45974 858 aa13.21□□□□□ -0.29
TRAF3-207ENST00000559734 PPP4CP60510 307 aa13.21□□□□□ -0.29
TRAF3-207ENST00000559734 PRAMEF19Q5SWL8 479 aa13.21□□□□□ -0.29
TRAF3-207ENST00000559734 ACER1Q8TDN7 264 aa13.21□□□□□ -0.29
TRAF3-207ENST00000559734 PPM1EQ8WY54 764 aa13.21□□□□□ -0.29
TRAF3-207ENST00000559734 SEPT4O43236 478 aa13.2□□□□□ -0.3
TRAF3-207ENST00000559734 TLE2Q04725 743 aa13.2□□□□□ -0.3
TRAF3-207ENST00000559734 G3BP1Q13283 466 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRAF3-207ENST00000559734 GRIN2CQ14957 1233 aa13.2□□□□□ -0.3
TRAF3-207ENST00000559734 SNX17Q15036 470 aa13.2□□□□□ -0.3
TRAF3-207ENST00000559734 LRRC41Q15345 812 aa13.2□□□□□ -0.3
TRAF3-207ENST00000559734 ABCB5Q2M3G0 1257 aa13.2□□□□□ -0.3
TRAF3-207ENST00000559734 FAM47AQ5JRC9 791 aa13.2□□□□□ -0.3
TRAF3-207ENST00000559734 KIAA1683Q9H0B3 1180 aa13.2□□□□□ -0.3
TRAF3-207ENST00000559734 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
TRAF3-207ENST00000559734 RLFQ13129 1914 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 TMEM265A0A087WTH1 108 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 PQBP1O60828 265 aaKnown RBP13.19□□□□□ -0.3
TRAF3-207ENST00000559734 GNAI3P08754 354 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 CLTBP09497 229 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 RAG1P15918 1043 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 CYP7A1P22680 504 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 ITGB8P26012 769 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 EPHB4P54760 987 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 SLFN5Q08AF3 891 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 PLS1Q14651 629 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 CERKLQ49MI3 558 aaPredicted RBP13.19□□□□□ -0.3
TRAF3-207ENST00000559734 CCDC158Q5M9N0 1113 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 OLFML2BQ68BL8 750 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
TRAF3-207ENST00000559734 LBX2Q6XYB7 198 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 MIGA1Q8NAN2 632 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 MOV10L1Q9BXT6 1211 aaKnown RBP13.19□□□□□ -0.3
TRAF3-207ENST00000559734 TANGO6Q9C0B7 1094 aa13.19□□□□□ -0.3
TRAF3-207ENST00000559734 EYSQ5T1H1 3165 aa13.18□□□□□ -0.3
TRAF3-207ENST00000559734 CYP2E1P05181 493 aaPredicted RBP13.18□□□□□ -0.3
TRAF3-207ENST00000559734 ERCC3P19447 782 aa13.18□□□□□ -0.3
TRAF3-207ENST00000559734 DNAJB2P25686 324 aa13.18□□□□□ -0.3
TRAF3-207ENST00000559734 OS9Q13438 667 aaPredicted RBP13.18□□□□□ -0.3
TRAF3-207ENST00000559734 TATDN1Q6P1N9 297 aa13.18□□□□□ -0.3
TRAF3-207ENST00000559734 NCAPG2Q86XI2 1143 aa13.18□□□□□ -0.3
TRAF3-207ENST00000559734 CDCA7LQ96GN5 454 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms