RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 HERVK_113Q902F9 699 aa12.04□□□□□ -0.48
SMAD3-211ENST00000559460 UIMC1Q96RL1 719 aa12.04□□□□□ -0.48
SMAD3-211ENST00000559460 FEZ1Q99689 392 aa12.04□□□□□ -0.48
SMAD3-211ENST00000559460 XPNPEP3Q9NQH7 507 aa12.04□□□□□ -0.48
SMAD3-211ENST00000559460 ATAD5Q96QE3 1844 aa12.04□□□□□ -0.48
SMAD3-211ENST00000559460 SMIM22K7EJ46 135 aa12.03□□□□□ -0.48
SMAD3-211ENST00000559460 ERC2O15083 957 aa12.03□□□□□ -0.48
SMAD3-211ENST00000559460 NPM3O75607 178 aaKnown RBP12.03□□□□□ -0.48
SMAD3-211ENST00000559460 RARBP10826 455 aa12.03□□□□□ -0.48
SMAD3-211ENST00000559460 ATP2B3Q16720 1220 aa12.03□□□□□ -0.48
SMAD3-211ENST00000559460 CSPP1Q1MSJ5 1256 aa12.03□□□□□ -0.48
SMAD3-211ENST00000559460 FAM47AQ5JRC9 791 aa12.03□□□□□ -0.48
SMAD3-211ENST00000559460 OLFML2BQ68BL8 750 aa12.03□□□□□ -0.48
SMAD3-211ENST00000559460 USP17L2Q6R6M4 530 aa12.03□□□□□ -0.48
SMAD3-211ENST00000559460 TMEM199Q8N511 208 aa12.03□□□□□ -0.48
SMAD3-211ENST00000559460 KLHDC4Q8TBB5 520 aa12.03□□□□□ -0.48
SMAD3-211ENST00000559460 NOL10Q9BSC4 688 aaKnown RBP12.03□□□□□ -0.48
SMAD3-211ENST00000559460 NKX2-4Q9H2Z4 354 aa12.03□□□□□ -0.48
SMAD3-211ENST00000559460 PHF24Q9UPV7 400 aa12.03□□□□□ -0.48
SMAD3-211ENST00000559460 USP17L15C9J2P7 530 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 USP17L13C9JLJ4 530 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 USP17L11C9JVI0 530 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 USP17L18D6R9N7 530 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 USP17L22D6RA61 530 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 USP17L17D6RBQ6 530 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 USP17L19D6RCP7 530 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 USP17L20D6RJB6 530 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 MAP4K4O95819 1239 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-211ENST00000559460 TIMP1P01033 207 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 GSTO1P78417 241 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 USP17L24Q0WX57 530 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 PPP2R2DQ66LE6 453 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 MFSD5Q6N075 450 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 NUP133Q8WUM0 1156 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 FAM163AQ96GL9 167 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-211ENST00000559460 GINM1Q9NU53 330 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 COG5Q9UP83 839 aa12.02□□□□□ -0.49
SMAD3-211ENST00000559460 MYH2Q9UKX2 1941 aa12.01□□□□□ -0.49
SMAD3-211ENST00000559460 TCF20Q9UGU0 1960 aaKnown RBP12.01□□□□□ -0.49
SMAD3-211ENST00000559460 A0A1W2PQ45 241 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-211ENST00000559460 A0A1W2PQY0 241 aa12.01□□□□□ -0.49
SMAD3-211ENST00000559460 PRR33A8MZF0 331 aa12.01□□□□□ -0.49
SMAD3-211ENST00000559460 LDHCP07864 332 aa12.01□□□□□ -0.49
SMAD3-211ENST00000559460 NBPF7P0C2Y1 421 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-211ENST00000559460 ADORA2AP29274 412 aa12.01□□□□□ -0.49
SMAD3-211ENST00000559460 ZYXQ15942 572 aaKnown RBP12.01□□□□□ -0.49
SMAD3-211ENST00000559460 RABL6Q3YEC7 729 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-211ENST00000559460 TMEM240Q5SV17 173 aa12.01□□□□□ -0.49
SMAD3-211ENST00000559460 ERICH6Q7L0X2 663 aa12.01□□□□□ -0.49
SMAD3-211ENST00000559460 DHX36Q9H2U1 1008 aaKnown RBP12.01□□□□□ -0.49
SMAD3-211ENST00000559460 STARD7Q9NQZ5 370 aa12.01□□□□□ -0.49
SMAD3-211ENST00000559460 PI4KBQ9UBF8 816 aa12.01□□□□□ -0.49
SMAD3-211ENST00000559460 MROH7Q68CQ1 1323 aa12.01□□□□□ -0.49
SMAD3-211ENST00000559460 GPR75-ASB3A0A0A6YYF3 556 aa12□□□□□ -0.49
SMAD3-211ENST00000559460 EYA2O00167 538 aa12□□□□□ -0.49
SMAD3-211ENST00000559460 STRNO43815 780 aa12□□□□□ -0.49
SMAD3-211ENST00000559460 GDF11O95390 407 aa12□□□□□ -0.49
SMAD3-211ENST00000559460 FAAP100Q0VG06 881 aa12□□□□□ -0.49
SMAD3-211ENST00000559460 TEX11Q8IYF3 940 aa12□□□□□ -0.49
SMAD3-211ENST00000559460 KAZALD1Q96I82 304 aa12□□□□□ -0.49
SMAD3-211ENST00000559460 TOX2Q96NM4 488 aa12□□□□□ -0.49
SMAD3-211ENST00000559460 CEP126Q9P2H0 1117 aa12□□□□□ -0.49
SMAD3-211ENST00000559460 CSF2RAP15509 400 aa11.99□□□□□ -0.49
SMAD3-211ENST00000559460 PHKA1P46020 1223 aa11.99□□□□□ -0.49
SMAD3-211ENST00000559460 USP14P54578 494 aa11.99□□□□□ -0.49
SMAD3-211ENST00000559460 RHBDL3P58872 404 aa11.99□□□□□ -0.49
SMAD3-211ENST00000559460 RRP1BQ14684 758 aaKnown RBP11.99□□□□□ -0.49
SMAD3-211ENST00000559460 ZNF365Q70YC5 407 aa11.99□□□□□ -0.49
SMAD3-211ENST00000559460 ANKRD33Q7Z3H0 272 aa11.99□□□□□ -0.49
SMAD3-211ENST00000559460 ZBTB21Q9ULJ3 1066 aa11.99□□□□□ -0.49
SMAD3-211ENST00000559460 ZNF521Q96K83 1311 aa11.99□□□□□ -0.49
SMAD3-211ENST00000559460 PLXNA1Q9UIW2 1896 aa11.99□□□□□ -0.49
SMAD3-211ENST00000559460 DNAH12Q6ZR08 3092 aa11.99□□□□□ -0.49
SMAD3-211ENST00000559460 BDP1A6H8Y1 2624 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 PIEZO1Q92508 2521 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 CACNA1FO60840 1977 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 PI4K2BG5E9Z4 385 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 TLR3O15455 904 aaKnown RBP11.98□□□□□ -0.49
SMAD3-211ENST00000559460 CNMDO75829 334 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 PGK1P00558 417 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 ACRP10323 421 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 NHLH1Q02575 133 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 MECOMQ03112 1051 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 PRAMEF19Q5SWL8 479 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 ATF7IPQ6VMQ6 1270 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 ANKRD44Q8N8A2 993 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 HLA-CQ95604 372 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 C11orf16Q9NQ32 467 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 EMILIN3Q9NT22 766 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 NCOR1O75376 2440 aa11.98□□□□□ -0.49
SMAD3-211ENST00000559460 VAMP4O75379 141 aa11.97□□□□□ -0.49
SMAD3-211ENST00000559460 FGBP02675 491 aa11.97□□□□□ -0.49
SMAD3-211ENST00000559460 HLA-DOAP06340 250 aa11.97□□□□□ -0.49
SMAD3-211ENST00000559460 RASIP1Q5U651 963 aa11.97□□□□□ -0.49
SMAD3-211ENST00000559460 CCDC102BQ68D86 513 aa11.97□□□□□ -0.49
SMAD3-211ENST00000559460 CATSPERGQ6ZRH7 1159 aa11.97□□□□□ -0.49
SMAD3-211ENST00000559460 VTI1AQ96AJ9 217 aa11.97□□□□□ -0.49
SMAD3-211ENST00000559460 C12orf42Q96LP6 360 aa11.97□□□□□ -0.49
SMAD3-211ENST00000559460 PPP1R12CQ9BZL4 782 aa11.97□□□□□ -0.49
SMAD3-211ENST00000559460 SIL1Q9H173 461 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms