RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 PI16Q6UXB8 463 aa20.21■□□□□ 0.83
PSEN1-224ENST00000559361 USP6NLQ92738 828 aa20.21■□□□□ 0.83
PSEN1-224ENST00000559361 NSUN4Q96CB9 384 aaKnown RBP20.21■□□□□ 0.83
PSEN1-224ENST00000559361 EVI5LQ96CN4 794 aa20.21■□□□□ 0.83
PSEN1-224ENST00000559361 UBE2OQ9C0C9 1292 aaKnown RBP20.21■□□□□ 0.83
PSEN1-224ENST00000559361 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.21■□□□□ 0.83
PSEN1-224ENST00000559361 SNRKQ9NRH2 765 aa20.21■□□□□ 0.83
PSEN1-224ENST00000559361 HERC5Q9UII4 1024 aaKnown RBP20.21■□□□□ 0.83
PSEN1-224ENST00000559361 VCANP13611 3396 aa20.2■□□□□ 0.82
PSEN1-224ENST00000559361 GOLIM4O00461 696 aa20.2■□□□□ 0.82
PSEN1-224ENST00000559361 PRKAR2AP13861 404 aaKnown RBP20.2■□□□□ 0.82
PSEN1-224ENST00000559361 CYP2B6P20813 491 aa20.2■□□□□ 0.82
PSEN1-224ENST00000559361 BMP2KLQ5H9B9 411 aa20.2■□□□□ 0.82
PSEN1-224ENST00000559361 LHX8Q68G74 356 aa20.2■□□□□ 0.82
PSEN1-224ENST00000559361 P2RX7Q99572 595 aaKnown RBP20.2■□□□□ 0.82
PSEN1-224ENST00000559361 NUDT12Q9BQG2 462 aa20.2■□□□□ 0.82
PSEN1-224ENST00000559361 TXNRD2Q9NNW7 524 aa20.2■□□□□ 0.82
PSEN1-224ENST00000559361 LRP2BPQ9P2M1 347 aa20.2■□□□□ 0.82
PSEN1-224ENST00000559361 SIPA1L1O43166 1804 aa20.2■□□□□ 0.82
PSEN1-224ENST00000559361 LDHCP07864 332 aa20.19■□□□□ 0.82
PSEN1-224ENST00000559361 BACE1P56817 501 aa20.19■□□□□ 0.82
PSEN1-224ENST00000559361 ZSCAN25Q6NSZ9 544 aa20.19■□□□□ 0.82
PSEN1-224ENST00000559361 TRMT44Q8IYL2 757 aaKnown RBP20.19■□□□□ 0.82
PSEN1-224ENST00000559361 KBTBD3Q8NAB2 608 aa20.19■□□□□ 0.82
PSEN1-224ENST00000559361 SOCS4Q8WXH5 440 aa20.19■□□□□ 0.82
PSEN1-224ENST00000559361 AS3MTQ9HBK9 375 aa20.19■□□□□ 0.82
PSEN1-224ENST00000559361 POTEB2H3BUK9 544 aa20.18■□□□□ 0.82
PSEN1-224ENST00000559361 GSTO1P78417 241 aa20.18■□□□□ 0.82
PSEN1-224ENST00000559361 CACNB2Q08289 660 aaPredicted RBP20.18■□□□□ 0.82
PSEN1-224ENST00000559361 GPRC5AQ8NFJ5 357 aa20.18■□□□□ 0.82
PSEN1-224ENST00000559361 RBPJLQ9UBG7 517 aa20.18■□□□□ 0.82
PSEN1-224ENST00000559361 PEX10O60683 326 aa20.17■□□□□ 0.82
PSEN1-224ENST00000559361 ZFYP08048 801 aaPredicted RBP20.17■□□□□ 0.82
PSEN1-224ENST00000559361 HERVK_113P62684 666 aa20.17■□□□□ 0.82
PSEN1-224ENST00000559361 IRX3P78415 501 aaPredicted RBP20.17■□□□□ 0.82
PSEN1-224ENST00000559361 LRRC26Q2I0M4 334 aa20.17■□□□□ 0.82
PSEN1-224ENST00000559361 FAM109BQ6ICB4 259 aaPredicted RBP20.17■□□□□ 0.82
PSEN1-224ENST00000559361 METTL16Q86W50 562 aaKnown RBP20.17■□□□□ 0.82
PSEN1-224ENST00000559361 COL25A1Q9BXS0 654 aaPredicted RBP20.17■□□□□ 0.82
PSEN1-224ENST00000559361 PI4KBQ9UBF8 816 aa20.17■□□□□ 0.82
PSEN1-224ENST00000559361 TRIM6-TRIM34B2RNG4 842 aa20.16■□□□□ 0.82
PSEN1-224ENST00000559361 C19orf81C9J6K1 198 aa20.16■□□□□ 0.82
PSEN1-224ENST00000559361 IDH1O75874 414 aaKnown RBP20.16■□□□□ 0.82
PSEN1-224ENST00000559361 MAPK4P31152 587 aa20.16■□□□□ 0.82
PSEN1-224ENST00000559361 JAG1P78504 1218 aa20.16■□□□□ 0.82
PSEN1-224ENST00000559361 MTMR2Q13614 643 aa20.16■□□□□ 0.82
PSEN1-224ENST00000559361 Q3C1V9 767 aa20.16■□□□□ 0.82
PSEN1-224ENST00000559361 MORN1Q5T089 497 aa20.16■□□□□ 0.82
PSEN1-224ENST00000559361 POTEEQ6S8J3 1075 aa20.16■□□□□ 0.82
PSEN1-224ENST00000559361 TBC1D9Q6ZT07 1266 aa20.16■□□□□ 0.82
PSEN1-224ENST00000559361 CERS3Q8IU89 383 aa20.16■□□□□ 0.82
PSEN1-224ENST00000559361 PIH1D3Q9NQM4 214 aaKnown RBP20.16■□□□□ 0.82
PSEN1-224ENST00000559361 RAI14Q9P0K7 980 aa20.16■□□□□ 0.82
PSEN1-224ENST00000559361 TTC28Q96AY4 2481 aa20.16■□□□□ 0.82
PSEN1-224ENST00000559361 HIP1O00291 1037 aa20.15■□□□□ 0.82
PSEN1-224ENST00000559361 ASNSP08243 561 aa20.15■□□□□ 0.82
PSEN1-224ENST00000559361 GSPT1P15170 499 aaKnown RBP20.15■□□□□ 0.82
PSEN1-224ENST00000559361 CCND3P30281 292 aaPredicted RBP20.15■□□□□ 0.82
PSEN1-224ENST00000559361 TEX11Q8IYF3 940 aa20.15■□□□□ 0.82
PSEN1-224ENST00000559361 FSD1Q9BTV5 496 aa20.15■□□□□ 0.82
PSEN1-224ENST00000559361 DHX36Q9H2U1 1008 aaKnown RBP20.15■□□□□ 0.82
PSEN1-224ENST00000559361 ANTXR1Q9H6X2 564 aa20.15■□□□□ 0.82
PSEN1-224ENST00000559361 TMOD4Q9NZQ9 345 aa20.15■□□□□ 0.82
PSEN1-224ENST00000559361 NDUFB9Q9Y6M9 179 aa20.15■□□□□ 0.82
PSEN1-224ENST00000559361 FRMPD3Q5JV73 1810 aa20.15■□□□□ 0.82
PSEN1-224ENST00000559361 CDK5RAP2Q96SN8 1893 aa20.15■□□□□ 0.82
PSEN1-224ENST00000559361 ZKSCAN1P17029 563 aaPredicted RBP20.14■□□□□ 0.81
PSEN1-224ENST00000559361 ERVK-9P63128 1117 aa20.14■□□□□ 0.81
PSEN1-224ENST00000559361 ERVK-24P63145 666 aa20.14■□□□□ 0.81
PSEN1-224ENST00000559361 CCL14Q16627 93 aa20.14■□□□□ 0.81
PSEN1-224ENST00000559361 PORCNQ9H237 461 aa20.14■□□□□ 0.81
PSEN1-224ENST00000559361 DNAJC18Q9H819 358 aa20.14■□□□□ 0.81
PSEN1-224ENST00000559361 GINM1Q9NU53 330 aa20.14■□□□□ 0.81
PSEN1-224ENST00000559361 SPTBN5Q9NRC6 3674 aaKnown RBP20.13■□□□□ 0.81
PSEN1-224ENST00000559361 RGS2P41220 211 aa20.13■□□□□ 0.81
PSEN1-224ENST00000559361 UBE3CQ15386 1083 aa20.13■□□□□ 0.81
PSEN1-224ENST00000559361 SLC9C2Q5TAH2 1124 aa20.13■□□□□ 0.81
PSEN1-224ENST00000559361 NAA16Q6N069 864 aaPredicted RBP20.13■□□□□ 0.81
PSEN1-224ENST00000559361 GPR142Q7Z601 462 aa20.13■□□□□ 0.81
PSEN1-224ENST00000559361 SH3RF3Q8TEJ3 882 aaPredicted RBP20.13■□□□□ 0.81
PSEN1-224ENST00000559361 RILPL2Q969X0 211 aa20.13■□□□□ 0.81
PSEN1-224ENST00000559361 EDC3Q96F86 508 aaKnown RBP20.13■□□□□ 0.81
PSEN1-224ENST00000559361 GUCD1Q96NT3 240 aa20.13■□□□□ 0.81
PSEN1-224ENST00000559361 FOCADQ5VW36 1801 aa20.12■□□□□ 0.81
PSEN1-224ENST00000559361 USP17L10C9JJH3 530 aa20.12■□□□□ 0.81
PSEN1-224ENST00000559361 SDSP20132 328 aa20.12■□□□□ 0.81
PSEN1-224ENST00000559361 PPP4CP60510 307 aa20.12■□□□□ 0.81
PSEN1-224ENST00000559361 MDM2Q00987 491 aaPredicted RBP20.12■□□□□ 0.81
PSEN1-224ENST00000559361 FOXP4Q8IVH2 680 aaPredicted RBP20.12■□□□□ 0.81
PSEN1-224ENST00000559361 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.12■□□□□ 0.81
PSEN1-224ENST00000559361 GTF3C2Q8WUA4 911 aaPredicted RBP20.12■□□□□ 0.81
PSEN1-224ENST00000559361 EYSQ5T1H1 3165 aa20.11■□□□□ 0.81
PSEN1-224ENST00000559361 PDE6AP16499 860 aa20.11■□□□□ 0.81
PSEN1-224ENST00000559361 ADD2P35612 726 aa20.11■□□□□ 0.81
PSEN1-224ENST00000559361 SHROOM1Q2M3G4 852 aaPredicted RBP20.11■□□□□ 0.81
PSEN1-224ENST00000559361 PLEKHH3Q7Z736 793 aa20.11■□□□□ 0.81
PSEN1-224ENST00000559361 APBA2Q99767 749 aa20.11■□□□□ 0.81
PSEN1-224ENST00000559361 PRUNE2Q8WUY3 3088 aa20.11■□□□□ 0.81
PSEN1-224ENST00000559361 MAST2Q6P0Q8 1798 aa20.11■□□□□ 0.81
PSEN1-224ENST00000559361 RNF113AO15541 343 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms