RNA–Protein interactions for RNA: ENST00000559243.1

CCDC33-207, Transcript of coiled-coil domain containing 33, humanhuman

TSL 4

Gene CCDC33, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-207ENST00000559243 USP17L17D6RBQ6 530 aa12.98□□□□□ -0.33
CCDC33-207ENST00000559243 USP17L19D6RCP7 530 aa12.98□□□□□ -0.33
CCDC33-207ENST00000559243 USP17L20D6RJB6 530 aa12.98□□□□□ -0.33
CCDC33-207ENST00000559243 HMMRO75330 724 aa12.98□□□□□ -0.33
CCDC33-207ENST00000559243 POLR3DP05423 398 aaPredicted RBP12.98□□□□□ -0.33
CCDC33-207ENST00000559243 XRCC5P13010 732 aaKnown RBP12.98□□□□□ -0.33
CCDC33-207ENST00000559243 PLCD1P51178 756 aa12.98□□□□□ -0.33
CCDC33-207ENST00000559243 USP14P54578 494 aa12.98□□□□□ -0.33
CCDC33-207ENST00000559243 USP17L24Q0WX57 530 aa12.98□□□□□ -0.33
CCDC33-207ENST00000559243 SLC9C2Q5TAH2 1124 aa12.98□□□□□ -0.33
CCDC33-207ENST00000559243 ANKLE1Q8NAG6 615 aa12.98□□□□□ -0.33
CCDC33-207ENST00000559243 KIF1BPQ96EK5 621 aa12.98□□□□□ -0.33
CCDC33-207ENST00000559243 C12orf42Q96LP6 360 aa12.98□□□□□ -0.33
CCDC33-207ENST00000559243 CRNKL1Q9BZJ0 848 aaKnown RBP12.98□□□□□ -0.33
CCDC33-207ENST00000559243 DDX19BQ9UMR2 479 aa12.98□□□□□ -0.33
CCDC33-207ENST00000559243 IFIT2P09913 472 aaKnown RBP12.97□□□□□ -0.33
CCDC33-207ENST00000559243 PDE6AP16499 860 aa12.97□□□□□ -0.33
CCDC33-207ENST00000559243 GPR142Q7Z601 462 aa12.97□□□□□ -0.33
CCDC33-207ENST00000559243 PLEKHH3Q7Z736 793 aa12.97□□□□□ -0.33
CCDC33-207ENST00000559243 TRMT44Q8IYL2 757 aaKnown RBP12.97□□□□□ -0.33
CCDC33-207ENST00000559243 DIS3LQ8TF46 1054 aaKnown RBP12.97□□□□□ -0.33
CCDC33-207ENST00000559243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC33-207ENST00000559243 DNAJC2Q99543 621 aaKnown RBP12.97□□□□□ -0.33
CCDC33-207ENST00000559243 KIAA1683Q9H0B3 1180 aa12.97□□□□□ -0.33
CCDC33-207ENST00000559243 BCL11AQ9H165 835 aa12.97□□□□□ -0.33
CCDC33-207ENST00000559243 PORCNQ9H237 461 aa12.97□□□□□ -0.33
CCDC33-207ENST00000559243 CWC22Q9HCG8 908 aaKnown RBP12.97□□□□□ -0.33
CCDC33-207ENST00000559243 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
CCDC33-207ENST00000559243 RABGAP1Q9Y3P9 1069 aa12.97□□□□□ -0.33
CCDC33-207ENST00000559243 ZNF532Q9HCE3 1301 aa12.96□□□□□ -0.33
CCDC33-207ENST00000559243 GOLIM4O00461 696 aa12.96□□□□□ -0.33
CCDC33-207ENST00000559243 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
CCDC33-207ENST00000559243 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.33
CCDC33-207ENST00000559243 SHMT1P34896 483 aa12.96□□□□□ -0.33
CCDC33-207ENST00000559243 RGS2P41220 211 aa12.96□□□□□ -0.33
CCDC33-207ENST00000559243 MAP3K21Q5TCX8 1036 aa12.96□□□□□ -0.33
CCDC33-207ENST00000559243 POTEEQ6S8J3 1075 aa12.96□□□□□ -0.33
CCDC33-207ENST00000559243 CATSPERGQ6ZRH7 1159 aa12.96□□□□□ -0.33
CCDC33-207ENST00000559243 ACER1Q8TDN7 264 aa12.96□□□□□ -0.33
CCDC33-207ENST00000559243 USP6NLQ92738 828 aa12.96□□□□□ -0.33
CCDC33-207ENST00000559243 NBPF3Q9H094 633 aa12.96□□□□□ -0.33
CCDC33-207ENST00000559243 PRO3102Q9H379 93 aa12.96□□□□□ -0.33
CCDC33-207ENST00000559243 MCM9Q9NXL9 1143 aa12.96□□□□□ -0.33
CCDC33-207ENST00000559243 RAB11FIP3O75154 756 aa12.95□□□□□ -0.34
CCDC33-207ENST00000559243 GLRX3O76003 335 aaKnown RBP12.95□□□□□ -0.34
CCDC33-207ENST00000559243 VCAM1P19320 739 aa12.95□□□□□ -0.34
CCDC33-207ENST00000559243 CCNA1P78396 465 aa12.95□□□□□ -0.34
CCDC33-207ENST00000559243 MORN1Q5T089 497 aa12.95□□□□□ -0.34
CCDC33-207ENST00000559243 SIRT2Q8IXJ6 389 aa12.95□□□□□ -0.34
CCDC33-207ENST00000559243 CHMP4BQ9H444 224 aaKnown RBP12.95□□□□□ -0.34
CCDC33-207ENST00000559243 ZBTB40Q9NUA8 1239 aa12.95□□□□□ -0.34
CCDC33-207ENST00000559243 OGDHLQ9ULD0 1010 aa12.95□□□□□ -0.34
CCDC33-207ENST00000559243 ALPK3Q96L96 1907 aa12.95□□□□□ -0.34
CCDC33-207ENST00000559243 NAV1Q8NEY1 1877 aa12.95□□□□□ -0.34
CCDC33-207ENST00000559243 DDX60LQ5H9U9 1706 aaKnown RBP12.94□□□□□ -0.34
CCDC33-207ENST00000559243 TCRBV5S4A2TA0A5A2 114 aa12.94□□□□□ -0.34
CCDC33-207ENST00000559243 MPHOSPH10O00566 681 aaKnown RBP12.94□□□□□ -0.34
CCDC33-207ENST00000559243 CNMDO75829 334 aa12.94□□□□□ -0.34
CCDC33-207ENST00000559243 GUCY1A2P33402 732 aa12.94□□□□□ -0.34
CCDC33-207ENST00000559243 GABPAQ06546 454 aa12.94□□□□□ -0.34
CCDC33-207ENST00000559243 CACNB2Q08289 660 aaPredicted RBP12.94□□□□□ -0.34
CCDC33-207ENST00000559243 MAP2K5Q13163 448 aa12.94□□□□□ -0.34
CCDC33-207ENST00000559243 SEPT2Q15019 361 aa12.94□□□□□ -0.34
CCDC33-207ENST00000559243 CCL14Q16627 93 aa12.94□□□□□ -0.34
CCDC33-207ENST00000559243 WDR78Q5VTH9 848 aa12.94□□□□□ -0.34
CCDC33-207ENST00000559243 LCORLQ8N3X6 602 aa12.94□□□□□ -0.34
CCDC33-207ENST00000559243 SDR42E1Q8WUS8 393 aa12.94□□□□□ -0.34
CCDC33-207ENST00000559243 EDC3Q96F86 508 aaKnown RBP12.94□□□□□ -0.34
CCDC33-207ENST00000559243 APBA2Q99767 749 aa12.94□□□□□ -0.34
CCDC33-207ENST00000559243 C11orf49Q9H6J7 331 aa12.94□□□□□ -0.34
CCDC33-207ENST00000559243 DCP1AQ9NPI6 582 aaPredicted RBP12.94□□□□□ -0.34
CCDC33-207ENST00000559243 A0A1W2PPC1 479 aa12.93□□□□□ -0.34
CCDC33-207ENST00000559243 MNX1P50219 401 aaPredicted RBP12.93□□□□□ -0.34
CCDC33-207ENST00000559243 EVX2Q03828 476 aa12.93□□□□□ -0.34
CCDC33-207ENST00000559243 LBX2Q6XYB7 198 aa12.93□□□□□ -0.34
CCDC33-207ENST00000559243 C7orf61Q8IZ16 206 aa12.93□□□□□ -0.34
CCDC33-207ENST00000559243 BOLA2Q9H3K6 86 aa12.93□□□□□ -0.34
CCDC33-207ENST00000559243 RPAP3Q9H6T3 665 aaPredicted RBP12.93□□□□□ -0.34
CCDC33-207ENST00000559243 ARMT1Q9H993 441 aa12.93□□□□□ -0.34
CCDC33-207ENST00000559243 PAG1Q9NWQ8 432 aa12.93□□□□□ -0.34
CCDC33-207ENST00000559243 STAP2Q9UGK3 403 aa12.93□□□□□ -0.34
CCDC33-207ENST00000559243 LAMA3Q16787 3333 aa12.92□□□□□ -0.34
CCDC33-207ENST00000559243 SLC15A5A6NIM6 579 aa12.92□□□□□ -0.34
CCDC33-207ENST00000559243 SPDYE16A6NNV3 312 aaPredicted RBP12.92□□□□□ -0.34
CCDC33-207ENST00000559243 CYP2D6P10635 497 aa12.92□□□□□ -0.34
CCDC33-207ENST00000559243 ATP5JP18859 108 aa12.92□□□□□ -0.34
CCDC33-207ENST00000559243 CCND3P30281 292 aaPredicted RBP12.92□□□□□ -0.34
CCDC33-207ENST00000559243 MFSD14CQ5VZR4 134 aa12.92□□□□□ -0.34
CCDC33-207ENST00000559243 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCDC33-207ENST00000559243 BTBD7Q9P203 1132 aa12.92□□□□□ -0.34
CCDC33-207ENST00000559243 SWAP70Q9UH65 585 aa12.92□□□□□ -0.34
CCDC33-207ENST00000559243 ZMYND8Q9ULU4 1186 aaPredicted RBP12.92□□□□□ -0.34
CCDC33-207ENST00000559243 IVNS1ABPQ9Y6Y0 642 aa12.92□□□□□ -0.34
CCDC33-207ENST00000559243 A0A1W2PRG0 241 aa12.91□□□□□ -0.34
CCDC33-207ENST00000559243 PRKAB2O43741 272 aa12.91□□□□□ -0.34
CCDC33-207ENST00000559243 MBD4O95243 580 aa12.91□□□□□ -0.34
CCDC33-207ENST00000559243 PTPREP23469 700 aa12.91□□□□□ -0.34
CCDC33-207ENST00000559243 ADD2P35612 726 aa12.91□□□□□ -0.34
CCDC33-207ENST00000559243 COG2Q14746 738 aa12.91□□□□□ -0.34
CCDC33-207ENST00000559243 TMEM179Q6ZVK1 233 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms