RNA–Protein interactions for RNA: ENST00000559212.1

PCAT29-203, prostate cancer associated transcript 29, humanhuman

TSL 3 BASIC

Gene PCAT29, Length 647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-203ENST00000559212 RIOK1Q9BRS2 568 aaKnown RBP12.85□□□□□ -0.35
PCAT29-203ENST00000559212 DDX60LQ5H9U9 1706 aaKnown RBP12.85□□□□□ -0.35
PCAT29-203ENST00000559212 ALPK3Q96L96 1907 aa12.84□□□□□ -0.35
PCAT29-203ENST00000559212 APBB1O00213 710 aa12.84□□□□□ -0.35
PCAT29-203ENST00000559212 HMMRO75330 724 aa12.84□□□□□ -0.35
PCAT29-203ENST00000559212 IFIT2P09913 472 aaKnown RBP12.84□□□□□ -0.35
PCAT29-203ENST00000559212 ZKSCAN1P17029 563 aaPredicted RBP12.84□□□□□ -0.35
PCAT29-203ENST00000559212 RGS2P41220 211 aa12.84□□□□□ -0.35
PCAT29-203ENST00000559212 PLCD1P51178 756 aa12.84□□□□□ -0.35
PCAT29-203ENST00000559212 SLC9C2Q5TAH2 1124 aa12.84□□□□□ -0.35
PCAT29-203ENST00000559212 GPR142Q7Z601 462 aa12.84□□□□□ -0.35
PCAT29-203ENST00000559212 PLEKHH3Q7Z736 793 aa12.84□□□□□ -0.35
PCAT29-203ENST00000559212 RPAP2Q8IXW5 612 aaPredicted RBP12.84□□□□□ -0.35
PCAT29-203ENST00000559212 KIF1BPQ96EK5 621 aa12.84□□□□□ -0.35
PCAT29-203ENST00000559212 CRNKL1Q9BZJ0 848 aaKnown RBP12.84□□□□□ -0.35
PCAT29-203ENST00000559212 NBPF3Q9H094 633 aa12.84□□□□□ -0.35
PCAT29-203ENST00000559212 KIAA1683Q9H0B3 1180 aa12.84□□□□□ -0.35
PCAT29-203ENST00000559212 PORCNQ9H237 461 aa12.84□□□□□ -0.35
PCAT29-203ENST00000559212 PRO3102Q9H379 93 aa12.84□□□□□ -0.35
PCAT29-203ENST00000559212 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
PCAT29-203ENST00000559212 PDE6AP16499 860 aa12.83□□□□□ -0.36
PCAT29-203ENST00000559212 SHMT1P34896 483 aa12.83□□□□□ -0.36
PCAT29-203ENST00000559212 CCNA1P78396 465 aa12.83□□□□□ -0.36
PCAT29-203ENST00000559212 MAP3K21Q5TCX8 1036 aa12.83□□□□□ -0.36
PCAT29-203ENST00000559212 CATSPERGQ6ZRH7 1159 aa12.83□□□□□ -0.36
PCAT29-203ENST00000559212 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.83□□□□□ -0.36
PCAT29-203ENST00000559212 USP6NLQ92738 828 aa12.83□□□□□ -0.36
PCAT29-203ENST00000559212 DNAJC2Q99543 621 aaKnown RBP12.83□□□□□ -0.36
PCAT29-203ENST00000559212 BCL11AQ9H165 835 aa12.83□□□□□ -0.36
PCAT29-203ENST00000559212 C11orf49Q9H6J7 331 aa12.83□□□□□ -0.36
PCAT29-203ENST00000559212 OGDHLQ9ULD0 1010 aa12.83□□□□□ -0.36
PCAT29-203ENST00000559212 DDX19BQ9UMR2 479 aa12.83□□□□□ -0.36
PCAT29-203ENST00000559212 RABGAP1Q9Y3P9 1069 aa12.83□□□□□ -0.36
PCAT29-203ENST00000559212 ZNF532Q9HCE3 1301 aa12.83□□□□□ -0.36
PCAT29-203ENST00000559212 A0A1W2PPC1 479 aa12.82□□□□□ -0.36
PCAT29-203ENST00000559212 GOLIM4O00461 696 aa12.82□□□□□ -0.36
PCAT29-203ENST00000559212 RAB11FIP3O75154 756 aa12.82□□□□□ -0.36
PCAT29-203ENST00000559212 CNMDO75829 334 aa12.82□□□□□ -0.36
PCAT29-203ENST00000559212 GLRX3O76003 335 aaKnown RBP12.82□□□□□ -0.36
PCAT29-203ENST00000559212 VCAM1P19320 739 aa12.82□□□□□ -0.36
PCAT29-203ENST00000559212 CACNB2Q08289 660 aaPredicted RBP12.82□□□□□ -0.36
PCAT29-203ENST00000559212 MORN1Q5T089 497 aa12.82□□□□□ -0.36
PCAT29-203ENST00000559212 WDR78Q5VTH9 848 aa12.82□□□□□ -0.36
PCAT29-203ENST00000559212 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
PCAT29-203ENST00000559212 C7orf61Q8IZ16 206 aa12.82□□□□□ -0.36
PCAT29-203ENST00000559212 ACER1Q8TDN7 264 aa12.82□□□□□ -0.36
PCAT29-203ENST00000559212 APBA2Q99767 749 aa12.82□□□□□ -0.36
PCAT29-203ENST00000559212 MCM9Q9NXL9 1143 aa12.82□□□□□ -0.36
PCAT29-203ENST00000559212 COG6Q9Y2V7 657 aa12.82□□□□□ -0.36
PCAT29-203ENST00000559212 MPHOSPH10O00566 681 aaKnown RBP12.81□□□□□ -0.36
PCAT29-203ENST00000559212 GABPAQ06546 454 aa12.81□□□□□ -0.36
PCAT29-203ENST00000559212 SEPT2Q15019 361 aa12.81□□□□□ -0.36
PCAT29-203ENST00000559212 CCL14Q16627 93 aa12.81□□□□□ -0.36
PCAT29-203ENST00000559212 EDC3Q96F86 508 aaKnown RBP12.81□□□□□ -0.36
PCAT29-203ENST00000559212 CHMP4BQ9H444 224 aaKnown RBP12.81□□□□□ -0.36
PCAT29-203ENST00000559212 RPAP3Q9H6T3 665 aaPredicted RBP12.81□□□□□ -0.36
PCAT29-203ENST00000559212 STAP2Q9UGK3 403 aa12.81□□□□□ -0.36
PCAT29-203ENST00000559212 TCRBV5S4A2TA0A5A2 114 aa12.8□□□□□ -0.36
PCAT29-203ENST00000559212 SLC15A5A6NIM6 579 aa12.8□□□□□ -0.36
PCAT29-203ENST00000559212 GUCY1A2P33402 732 aa12.8□□□□□ -0.36
PCAT29-203ENST00000559212 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
PCAT29-203ENST00000559212 MAP2K5Q13163 448 aa12.8□□□□□ -0.36
PCAT29-203ENST00000559212 LBX2Q6XYB7 198 aa12.8□□□□□ -0.36
PCAT29-203ENST00000559212 LCORLQ8N3X6 602 aa12.8□□□□□ -0.36
PCAT29-203ENST00000559212 SDR42E1Q8WUS8 393 aa12.8□□□□□ -0.36
PCAT29-203ENST00000559212 DCP1AQ9NPI6 582 aaPredicted RBP12.8□□□□□ -0.36
PCAT29-203ENST00000559212 ZBTB40Q9NUA8 1239 aa12.8□□□□□ -0.36
PCAT29-203ENST00000559212 IVNS1ABPQ9Y6Y0 642 aa12.8□□□□□ -0.36
PCAT29-203ENST00000559212 SPDYE16A6NNV3 312 aaPredicted RBP12.79□□□□□ -0.36
PCAT29-203ENST00000559212 PTPREP23469 700 aa12.79□□□□□ -0.36
PCAT29-203ENST00000559212 CCND3P30281 292 aaPredicted RBP12.79□□□□□ -0.36
PCAT29-203ENST00000559212 EVX2Q03828 476 aa12.79□□□□□ -0.36
PCAT29-203ENST00000559212 MFSD14CQ5VZR4 134 aa12.79□□□□□ -0.36
PCAT29-203ENST00000559212 SIRT2Q8IXJ6 389 aa12.79□□□□□ -0.36
PCAT29-203ENST00000559212 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
PCAT29-203ENST00000559212 ARMT1Q9H993 441 aa12.79□□□□□ -0.36
PCAT29-203ENST00000559212 PAG1Q9NWQ8 432 aa12.79□□□□□ -0.36
PCAT29-203ENST00000559212 BTBD7Q9P203 1132 aa12.79□□□□□ -0.36
PCAT29-203ENST00000559212 SWAP70Q9UH65 585 aa12.79□□□□□ -0.36
PCAT29-203ENST00000559212 ZMYND8Q9ULU4 1186 aaPredicted RBP12.79□□□□□ -0.36
PCAT29-203ENST00000559212 MYH8P13535 1937 aa12.79□□□□□ -0.36
PCAT29-203ENST00000559212 CYP2D6P10635 497 aa12.78□□□□□ -0.36
PCAT29-203ENST00000559212 ADD2P35612 726 aa12.78□□□□□ -0.36
PCAT29-203ENST00000559212 COG2Q14746 738 aa12.78□□□□□ -0.36
PCAT29-203ENST00000559212 LHX8Q68G74 356 aa12.78□□□□□ -0.36
PCAT29-203ENST00000559212 TMEM179Q6ZVK1 233 aa12.78□□□□□ -0.36
PCAT29-203ENST00000559212 GDF15Q99988 308 aa12.78□□□□□ -0.36
PCAT29-203ENST00000559212 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.78□□□□□ -0.36
PCAT29-203ENST00000559212 FRMPD3Q5JV73 1810 aa12.78□□□□□ -0.36
PCAT29-203ENST00000559212 A0A1W2PRG0 241 aa12.77□□□□□ -0.37
PCAT29-203ENST00000559212 MBD4O95243 580 aa12.77□□□□□ -0.37
PCAT29-203ENST00000559212 SYN1P17600 705 aa12.77□□□□□ -0.37
PCAT29-203ENST00000559212 ATP5JP18859 108 aa12.77□□□□□ -0.37
PCAT29-203ENST00000559212 BMP8BP34820 402 aa12.77□□□□□ -0.37
PCAT29-203ENST00000559212 ATP2B2Q01814 1243 aa12.77□□□□□ -0.37
PCAT29-203ENST00000559212 GRB14Q14449 540 aa12.77□□□□□ -0.37
PCAT29-203ENST00000559212 AMOTL1Q8IY63 956 aa12.77□□□□□ -0.37
PCAT29-203ENST00000559212 SLC44A5Q8NCS7 719 aa12.77□□□□□ -0.37
PCAT29-203ENST00000559212 DYNLL2Q96FJ2 89 aa12.77□□□□□ -0.37
PCAT29-203ENST00000559212 TANGO6Q9C0B7 1094 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms