RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 SH3D19Q5HYK7 790 aa13.62□□□□□ -0.23
SNX1-204ENST00000559061 POTEEQ6S8J3 1075 aa13.62□□□□□ -0.23
SNX1-204ENST00000559061 STOX1Q6ZVD7 989 aa13.62□□□□□ -0.23
SNX1-204ENST00000559061 MAP4K1Q92918 833 aa13.62□□□□□ -0.23
SNX1-204ENST00000559061 EMILIN3Q9NT22 766 aa13.62□□□□□ -0.23
SNX1-204ENST00000559061 A0A0G2JMZ2 1700 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 ORC4O43929 436 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 NMT2O60551 498 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 CETPP11597 493 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 NOVP48745 357 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 HMGCS2P54868 508 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 MFAP1P55081 439 aaKnown RBP13.61□□□□□ -0.23
SNX1-204ENST00000559061 BACE1P56817 501 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 SREBF2Q12772 1141 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 RAB3GAP1Q15042 981 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 FAM47AQ5JRC9 791 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 TMEM179Q6ZVK1 233 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 AMOTL1Q8IY63 956 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 STAG1Q8WVM7 1258 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 CFHR5Q9BXR6 569 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 IL17RBQ9NRM6 502 aa13.61□□□□□ -0.23
SNX1-204ENST00000559061 CASP8AP2Q9UKL3 1982 aa13.6□□□□□ -0.23
SNX1-204ENST00000559061 MPHOSPH10O00566 681 aaKnown RBP13.6□□□□□ -0.23
SNX1-204ENST00000559061 TRPA1O75762 1119 aa13.6□□□□□ -0.23
SNX1-204ENST00000559061 TBC1D8O95759 1140 aa13.6□□□□□ -0.23
SNX1-204ENST00000559061 CYP21A2P08686 494 aa13.6□□□□□ -0.23
SNX1-204ENST00000559061 CRHR2Q13324 411 aa13.6□□□□□ -0.23
SNX1-204ENST00000559061 ANKRD23Q86SG2 305 aa13.6□□□□□ -0.23
SNX1-204ENST00000559061 REM2Q8IYK8 340 aaPredicted RBP13.6□□□□□ -0.23
SNX1-204ENST00000559061 NEDD1Q8NHV4 660 aa13.6□□□□□ -0.23
SNX1-204ENST00000559061 RUFY2Q8WXA3 655 aa13.6□□□□□ -0.23
SNX1-204ENST00000559061 C12orf42Q96LP6 360 aa13.6□□□□□ -0.23
SNX1-204ENST00000559061 CCDC17Q96LX7 622 aa13.6□□□□□ -0.23
SNX1-204ENST00000559061 SAGE1Q9NXZ1 904 aa13.6□□□□□ -0.23
SNX1-204ENST00000559061 EEF2P13639 858 aaKnown RBP13.59□□□□□ -0.23
SNX1-204ENST00000559061 INHBEP58166 350 aa13.59□□□□□ -0.23
SNX1-204ENST00000559061 ICA1Q05084 483 aa13.59□□□□□ -0.23
SNX1-204ENST00000559061 AKNAD1Q5T1N1 836 aa13.59□□□□□ -0.23
SNX1-204ENST00000559061 RASGRP2Q7LDG7 609 aa13.59□□□□□ -0.23
SNX1-204ENST00000559061 CEP95Q96GE4 821 aa13.59□□□□□ -0.23
SNX1-204ENST00000559061 TBC1D2Q9BYX2 928 aa13.59□□□□□ -0.23
SNX1-204ENST00000559061 KIAA1683Q9H0B3 1180 aa13.59□□□□□ -0.23
SNX1-204ENST00000559061 RBM8AQ9Y5S9 174 aaKnown RBP13.59□□□□□ -0.23
SNX1-204ENST00000559061 USP17L10C9JJH3 530 aa13.58□□□□□ -0.24
SNX1-204ENST00000559061 PDHXO00330 501 aa13.58□□□□□ -0.24
SNX1-204ENST00000559061 TFAP4Q01664 338 aa13.58□□□□□ -0.24
SNX1-204ENST00000559061 NECTIN1Q15223 517 aa13.58□□□□□ -0.24
SNX1-204ENST00000559061 ZYXQ15942 572 aaKnown RBP13.58□□□□□ -0.24
SNX1-204ENST00000559061 GADL1Q6ZQY3 521 aa13.58□□□□□ -0.24
SNX1-204ENST00000559061 PROCA1Q8NCQ7 364 aaPredicted RBP13.58□□□□□ -0.24
SNX1-204ENST00000559061 MKNK2Q9HBH9 465 aa13.58□□□□□ -0.24
SNX1-204ENST00000559061 AS3MTQ9HBK9 375 aa13.58□□□□□ -0.24
SNX1-204ENST00000559061 CABP5Q9NP86 173 aa13.58□□□□□ -0.24
SNX1-204ENST00000559061 MTMR4Q9NYA4 1195 aa13.58□□□□□ -0.24
SNX1-204ENST00000559061 AGTPBP1Q9UPW5 1226 aa13.58□□□□□ -0.24
SNX1-204ENST00000559061 CA12O43570 354 aa13.57□□□□□ -0.24
SNX1-204ENST00000559061 PEX10O60683 326 aa13.57□□□□□ -0.24
SNX1-204ENST00000559061 CYP2C8P10632 490 aa13.57□□□□□ -0.24
SNX1-204ENST00000559061 VCAM1P19320 739 aa13.57□□□□□ -0.24
SNX1-204ENST00000559061 LBX1P52954 281 aa13.57□□□□□ -0.24
SNX1-204ENST00000559061 PDE4BQ07343 736 aa13.57□□□□□ -0.24
SNX1-204ENST00000559061 RCSD1Q6JBY9 416 aa13.57□□□□□ -0.24
SNX1-204ENST00000559061 ZCCHC17Q9NP64 241 aaKnown RBP13.57□□□□□ -0.24
SNX1-204ENST00000559061 TMX2Q9Y320 296 aa13.57□□□□□ -0.24
SNX1-204ENST00000559061 GTF3C3Q9Y5Q9 886 aa13.57□□□□□ -0.24
SNX1-204ENST00000559061 COL11A1P12107 1806 aaPredicted RBP13.57□□□□□ -0.24
SNX1-204ENST00000559061 MGAMO43451 1857 aa13.57□□□□□ -0.24
SNX1-204ENST00000559061 HTTP42858 3142 aa13.57□□□□□ -0.24
SNX1-204ENST00000559061 B4E1Z4 1266 aa13.56□□□□□ -0.24
SNX1-204ENST00000559061 C19orf81C9J6K1 198 aa13.56□□□□□ -0.24
SNX1-204ENST00000559061 ZNF213O14771 459 aa13.56□□□□□ -0.24
SNX1-204ENST00000559061 SLC27A2O14975 620 aa13.56□□□□□ -0.24
SNX1-204ENST00000559061 CTGFP29279 349 aa13.56□□□□□ -0.24
SNX1-204ENST00000559061 USP17L2Q6R6M4 530 aa13.56□□□□□ -0.24
SNX1-204ENST00000559061 CYB5R4Q7L1T6 521 aa13.56□□□□□ -0.24
SNX1-204ENST00000559061 KANSL2Q9H9L4 492 aa13.56□□□□□ -0.24
SNX1-204ENST00000559061 ANO2Q9NQ90 1003 aa13.56□□□□□ -0.24
SNX1-204ENST00000559061 NYAP2Q9P242 653 aa13.56□□□□□ -0.24
SNX1-204ENST00000559061 SLC45A1Q9Y2W3 748 aa13.56□□□□□ -0.24
SNX1-204ENST00000559061 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
SNX1-204ENST00000559061 RANBP6O60518 1105 aaKnown RBP13.55□□□□□ -0.24
SNX1-204ENST00000559061 SLC3A2P08195 630 aaKnown RBP13.55□□□□□ -0.24
SNX1-204ENST00000559061 HOXA7P31268 230 aaPredicted RBP13.55□□□□□ -0.24
SNX1-204ENST00000559061 ANTXR2P58335 489 aa13.55□□□□□ -0.24
SNX1-204ENST00000559061 TAF1CQ15572 869 aaPredicted RBP13.55□□□□□ -0.24
SNX1-204ENST00000559061 IMMTQ16891 758 aaKnown RBP13.55□□□□□ -0.24
SNX1-204ENST00000559061 RRP12Q5JTH9 1297 aaKnown RBP13.55□□□□□ -0.24
SNX1-204ENST00000559061 CREB3L3Q68CJ9 461 aa13.55□□□□□ -0.24
SNX1-204ENST00000559061 MFSD6Q6ZSS7 791 aa13.55□□□□□ -0.24
SNX1-204ENST00000559061 FASTKD5Q7L8L6 764 aaKnown RBP13.55□□□□□ -0.24
SNX1-204ENST00000559061 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
SNX1-204ENST00000559061 ZNF444Q8N0Y2 327 aaPredicted RBP13.55□□□□□ -0.24
SNX1-204ENST00000559061 LRRC47Q8N1G4 583 aaKnown RBP13.55□□□□□ -0.24
SNX1-204ENST00000559061 MKL1Q969V6 931 aa13.55□□□□□ -0.24
SNX1-204ENST00000559061 VCPKMTQ9H867 229 aa13.55□□□□□ -0.24
SNX1-204ENST00000559061 CTNNA3Q9UI47 895 aa13.55□□□□□ -0.24
SNX1-204ENST00000559061 PLXNB2O15031 1838 aa13.55□□□□□ -0.24
SNX1-204ENST00000559061 E7EWF7 191 aa13.54□□□□□ -0.24
SNX1-204ENST00000559061 GPR25O00155 361 aa13.54□□□□□ -0.24
SNX1-204ENST00000559061 KDM4AO75164 1064 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms