RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 NCOA7Q8NI08 942 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 ESR2Q92731 530 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 CAPNS2Q96L46 248 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 CCDC17Q96LX7 622 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 FEZ1Q99689 392 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 KRT23Q9C075 422 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 CNNM2Q9H8M5 875 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 MTMR7Q9Y216 660 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 LOC285556D6RIA3 1793 aa14.68□□□□□ -0.06
GABPB1-208ENST00000558970 SPDYE5A6NIY4 337 aa14.67□□□□□ -0.06
GABPB1-208ENST00000558970 USP17L5A8MUK1 530 aa14.67□□□□□ -0.06
GABPB1-208ENST00000558970 IRF6O14896 467 aa14.67□□□□□ -0.06
GABPB1-208ENST00000558970 ECE1P42892 770 aa14.67□□□□□ -0.06
GABPB1-208ENST00000558970 MTMR2Q13614 643 aa14.67□□□□□ -0.06
GABPB1-208ENST00000558970 CYB5R4Q7L1T6 521 aa14.67□□□□□ -0.06
GABPB1-208ENST00000558970 ACER1Q8TDN7 264 aa14.67□□□□□ -0.06
GABPB1-208ENST00000558970 CEP95Q96GE4 821 aa14.67□□□□□ -0.06
GABPB1-208ENST00000558970 TCEANC2Q96MN5 208 aa14.67□□□□□ -0.06
GABPB1-208ENST00000558970 JAKMIP1Q96N16 626 aaKnown RBP14.67□□□□□ -0.06
GABPB1-208ENST00000558970 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.67□□□□□ -0.06
GABPB1-208ENST00000558970 LRRC2Q9BYS8 371 aa14.67□□□□□ -0.06
GABPB1-208ENST00000558970 ZSWIM5Q9P217 1185 aa14.67□□□□□ -0.06
GABPB1-208ENST00000558970 SLC10A3P09131 477 aa14.66□□□□□ -0.06
GABPB1-208ENST00000558970 FGRP09769 529 aa14.66□□□□□ -0.06
GABPB1-208ENST00000558970 EEF2P13639 858 aaKnown RBP14.66□□□□□ -0.06
GABPB1-208ENST00000558970 MAP2K1Q02750 393 aaPredicted RBP14.66□□□□□ -0.06
GABPB1-208ENST00000558970 SPP2Q13103 211 aa14.66□□□□□ -0.06
GABPB1-208ENST00000558970 SPRYD7Q5W111 196 aa14.66□□□□□ -0.06
GABPB1-208ENST00000558970 NEDD1Q8NHV4 660 aa14.66□□□□□ -0.06
GABPB1-208ENST00000558970 ZIC5Q96T25 663 aa14.66□□□□□ -0.06
GABPB1-208ENST00000558970 BACH2Q9BYV9 841 aa14.66□□□□□ -0.06
GABPB1-208ENST00000558970 AS3MTQ9HBK9 375 aa14.66□□□□□ -0.06
GABPB1-208ENST00000558970 IL17RBQ9NRM6 502 aa14.66□□□□□ -0.06
GABPB1-208ENST00000558970 STX8Q9UNK0 236 aa14.66□□□□□ -0.06
GABPB1-208ENST00000558970 PLIN4Q96Q06 1357 aa14.65□□□□□ -0.06
GABPB1-208ENST00000558970 FAM155AB1AL88 458 aaPredicted RBP14.65□□□□□ -0.06
GABPB1-208ENST00000558970 EIF5BO60841 1220 aaKnown RBP14.65□□□□□ -0.06
GABPB1-208ENST00000558970 PCP11498 1178 aaKnown RBP14.65□□□□□ -0.06
GABPB1-208ENST00000558970 PPATQ06203 517 aa14.65□□□□□ -0.06
GABPB1-208ENST00000558970 PPIL2Q13356 520 aa14.65□□□□□ -0.06
GABPB1-208ENST00000558970 GADL1Q6ZQY3 521 aa14.65□□□□□ -0.06
GABPB1-208ENST00000558970 MB21D2Q8IYB1 491 aaPredicted RBP14.65□□□□□ -0.06
GABPB1-208ENST00000558970 LRRC47Q8N1G4 583 aaKnown RBP14.65□□□□□ -0.06
GABPB1-208ENST00000558970 NEK1Q96PY6 1258 aa14.65□□□□□ -0.06
GABPB1-208ENST00000558970 UBAC1Q9BSL1 405 aa14.65□□□□□ -0.06
GABPB1-208ENST00000558970 UPF2Q9HAU5 1272 aaKnown RBP14.65□□□□□ -0.06
GABPB1-208ENST00000558970 CLIP2Q9UDT6 1046 aa14.65□□□□□ -0.06
GABPB1-208ENST00000558970 AFG3L2Q9Y4W6 797 aa14.65□□□□□ -0.06
GABPB1-208ENST00000558970 TNKSO95271 1327 aa14.65□□□□□ -0.06
GABPB1-208ENST00000558970 WDR33Q9C0J8 1336 aaKnown RBP14.65□□□□□ -0.06
GABPB1-208ENST00000558970 A0A1W2PRG0 241 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 PRC1O43663 620 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 CASTP20810 708 aaKnown RBP14.64□□□□□ -0.07
GABPB1-208ENST00000558970 HMGCS2P54868 508 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 ANTXR2P58335 489 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 KRT32Q14532 448 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 IQCA1Q86XH1 822 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 ZNF280CQ8ND82 737 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 CCDC102AQ96A19 550 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 HHIPL1Q96JK4 782 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 C22orf23Q9BZE7 217 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 KANSL2Q9H9L4 492 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 ARHGEF10LQ9HCE6 1279 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 MTMR4Q9NYA4 1195 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 TAOK2Q9UL54 1235 aa14.64□□□□□ -0.07
GABPB1-208ENST00000558970 ISY1Q9ULR0 285 aaKnown RBP14.64□□□□□ -0.07
GABPB1-208ENST00000558970 THSD7BQ9C0I4 1608 aa14.63□□□□□ -0.07
GABPB1-208ENST00000558970 CCL15-CCL14A0A0B4J2E2 113 aa14.63□□□□□ -0.07
GABPB1-208ENST00000558970 IGKV6D-41A0A0C4DH26 115 aa14.63□□□□□ -0.07
GABPB1-208ENST00000558970 UNCXA6NJT0 531 aa14.63□□□□□ -0.07
GABPB1-208ENST00000558970 IFIT3O14879 490 aaKnown RBP14.63□□□□□ -0.07
GABPB1-208ENST00000558970 LBX1P52954 281 aa14.63□□□□□ -0.07
GABPB1-208ENST00000558970 CCL15Q16663 113 aa14.63□□□□□ -0.07
GABPB1-208ENST00000558970 RASGRP2Q7LDG7 609 aa14.63□□□□□ -0.07
GABPB1-208ENST00000558970 SIAH1Q8IUQ4 282 aa14.63□□□□□ -0.07
GABPB1-208ENST00000558970 SPICE1Q8N0Z3 855 aa14.63□□□□□ -0.07
GABPB1-208ENST00000558970 ZSCAN10Q96SZ4 725 aaPredicted RBP14.63□□□□□ -0.07
GABPB1-208ENST00000558970 UPF3BQ9BZI7 483 aaKnown RBP14.63□□□□□ -0.07
GABPB1-208ENST00000558970 GPHNQ9NQX3 736 aaPredicted RBP14.63□□□□□ -0.07
GABPB1-208ENST00000558970 GINM1Q9NU53 330 aa14.63□□□□□ -0.07
GABPB1-208ENST00000558970 PARP14Q460N5 1801 aa14.62□□□□□ -0.07
GABPB1-208ENST00000558970 USP17L10C9JJH3 530 aa14.62□□□□□ -0.07
GABPB1-208ENST00000558970 EPB41L2O43491 1005 aaKnown RBP14.62□□□□□ -0.07
GABPB1-208ENST00000558970 TTLL1O95922 423 aa14.62□□□□□ -0.07
GABPB1-208ENST00000558970 ZBTB48P10074 688 aaPredicted RBP14.62□□□□□ -0.07
GABPB1-208ENST00000558970 HSPA8P11142 646 aaKnown RBP14.62□□□□□ -0.07
GABPB1-208ENST00000558970 MCM5P33992 734 aa14.62□□□□□ -0.07
GABPB1-208ENST00000558970 KIF23Q02241 960 aaPredicted RBP14.62□□□□□ -0.07
GABPB1-208ENST00000558970 SNAPC2Q13487 334 aa14.62□□□□□ -0.07
GABPB1-208ENST00000558970 BLOC1S2Q6QNY1 142 aa14.62□□□□□ -0.07
GABPB1-208ENST00000558970 SAMD1Q6SPF0 538 aaPredicted RBP14.62□□□□□ -0.07
GABPB1-208ENST00000558970 ENAHQ8N8S7 591 aaPredicted RBP14.62□□□□□ -0.07
GABPB1-208ENST00000558970 KCNB2Q92953 911 aa14.62□□□□□ -0.07
GABPB1-208ENST00000558970 SENP2Q9HC62 589 aa14.62□□□□□ -0.07
GABPB1-208ENST00000558970 ERICH2A1L162 156 aa14.61□□□□□ -0.07
GABPB1-208ENST00000558970 GTF2A2P52657 109 aa14.61□□□□□ -0.07
GABPB1-208ENST00000558970 BACE1P56817 501 aa14.61□□□□□ -0.07
GABPB1-208ENST00000558970 FGD1P98174 961 aa14.61□□□□□ -0.07
GABPB1-208ENST00000558970 TSGA10IPQ3SY00 556 aa14.61□□□□□ -0.07
GABPB1-208ENST00000558970 TMEM67Q5HYA8 995 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms