RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 ZAP70P43403 619 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 LYPD8Q6UX82 237 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 FAM151AQ8WW52 585 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 KIF1BPQ96EK5 621 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 PRDM10Q9NQV6 1147 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 USP40Q9NVE5 1235 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 AK9Q5TCS8 1911 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 CASP8AP2Q9UKL3 1982 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 GPR75-ASB3A0A0A6YYF3 556 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 UNCXA6NJT0 531 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 CA12O43570 354 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 WDHD1O75717 1129 aaPredicted RBP7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 IREB2P48200 963 aaKnown RBP7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 TCP10Q12799 353 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 SPRYD7Q5W111 196 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 ZFPM1Q8IX07 1006 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 THAP11Q96EK4 314 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 IDI2Q9BXS1 227 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 RAI14Q9P0K7 980 aa7.36□□□□□ -1.23
CTDSPL2-204ENST00000558966 ATRNL1Q5VV63 1379 aa7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 CDK5RAP2Q96SN8 1893 aa7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 RAB11FIP3O75154 756 aa7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 NR1I2O75469 434 aa7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 FMNL1O95466 1100 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 RGS3P49796 1198 aa7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 RHBDL3P58872 404 aa7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 VGLL4Q14135 290 aa7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 ANKRD13AQ8IZ07 590 aa7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 CLASRPQ8N2M8 674 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 SLC10A4Q96EP9 437 aa7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 WNK4Q96J92 1243 aa7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 DDX4Q9NQI0 724 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 PIH1D3Q9NQM4 214 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 RNF186Q9NXI6 227 aa7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 SAGE1Q9NXZ1 904 aa7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 LRP2BPQ9P2M1 347 aa7.35□□□□□ -1.23
CTDSPL2-204ENST00000558966 FOCADQ5VW36 1801 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 ENTPD3O75355 529 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 ZBTB48P10074 688 aaPredicted RBP7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 RFX1P22670 979 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 GSTO1P78417 241 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 SH3BP5LQ7L8J4 393 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 ADGRA1Q86SQ6 560 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 CRBNQ96SW2 442 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 ANTXR1Q9H6X2 564 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 ELP3Q9H9T3 547 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 SMARCA5O60264 1052 aaPredicted RBP7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 TRPA1O75762 1119 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 LDHCP07864 332 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 TM4SF4P48230 202 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 COPS2P61201 443 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 NAA16Q6N069 864 aaPredicted RBP7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 MIGA2Q7L4E1 593 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 HOOK2Q96ED9 719 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 WRNIP1Q96S55 665 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 MAP10Q9P2G4 905 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 SNCAIPQ9Y6H5 919 aa7.34□□□□□ -1.23
CTDSPL2-204ENST00000558966 SIPA1L1O43166 1804 aa7.34□□□□□ -1.24
CTDSPL2-204ENST00000558966 DDTLA6NHG4 134 aaPredicted RBP7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 IFIT2P09913 472 aaKnown RBP7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 SLURP2P0DP57 97 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 INPP5BP32019 993 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 SREBF2Q12772 1141 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 PICALMQ13492 652 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 DCAF15Q66K64 600 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 TNS4Q8IZW8 715 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 SH3RF3Q8TEJ3 882 aaPredicted RBP7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 ZKSCAN4Q969J2 545 aaPredicted RBP7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 OPTNQ96CV9 577 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 ZNF341Q9BYN7 854 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 LRRCC1Q9C099 1032 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 BCL11AQ9H165 835 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 ALG2Q9H553 416 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 ZNF112Q9UJU3 913 aa7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 COL2A1P02458 1487 aaPredicted RBP7.33□□□□□ -1.24
CTDSPL2-204ENST00000558966 MANSC4A6NHS7 340 aaPredicted RBP7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 IGF2BP3O00425 579 aaKnown RBP eCLIP7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 IGSF3O75054 1194 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 IDH1O75874 414 aaKnown RBP7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 MAP4K4O95819 1239 aaPredicted RBP7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 JUNDP17535 347 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 TEX11Q8IYF3 940 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 RETREG2Q8NC44 543 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 KCTD12Q96CX2 325 aaKnown RBP7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 EDC3Q96F86 508 aaKnown RBP7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 OSBPL5Q9H0X9 879 aaPredicted RBP7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 DCTPP1Q9H773 170 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 AATFQ9NY61 560 aaKnown RBP eCLIP7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 CSADQ9Y600 493 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 CYP7A1P22680 504 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 DYNLL1P63167 89 aaKnown RBP7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 MAP3K10Q02779 954 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 IFFO2Q5TF58 517 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 THSD4Q6ZMP0 1018 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 MAGEB6Q8N7X4 407 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms