RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 MAPKAPK5Q8IW41 473 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 FOXD4L4Q8WXT5 416 aaPredicted RBP9□□□□□ -0.97
LRRC28-211ENST00000558890 CCDC102AQ96A19 550 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 MS4A4AQ96JQ5 239 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 SEC62Q99442 399 aaKnown RBP9□□□□□ -0.97
LRRC28-211ENST00000558890 CNNM2Q9H8M5 875 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 EPB41L4AQ9HCS5 686 aaPredicted RBP9□□□□□ -0.97
LRRC28-211ENST00000558890 RTN4Q9NQC3 1192 aaKnown RBP9□□□□□ -0.97
LRRC28-211ENST00000558890 SNCAIPQ9Y6H5 919 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 WDR19Q8NEZ3 1342 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 TESPA1A2RU30 521 aaPredicted RBP8.99□□□□□ -0.97
LRRC28-211ENST00000558890 ORC4O43929 436 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 FGAP02671 866 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 HMGB1P09429 215 aaKnown RBP8.99□□□□□ -0.97
LRRC28-211ENST00000558890 ZSCAN22P10073 491 aaPredicted RBP8.99□□□□□ -0.97
LRRC28-211ENST00000558890 NF2P35240 595 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 IREB2P48200 963 aaKnown RBP8.99□□□□□ -0.97
LRRC28-211ENST00000558890 TM4SF4P48230 202 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 TDO2P48775 406 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 NASPP49321 788 aaPredicted RBP8.99□□□□□ -0.97
LRRC28-211ENST00000558890 PLCD1P51178 756 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 KIF23Q02241 960 aaPredicted RBP8.99□□□□□ -0.97
LRRC28-211ENST00000558890 CCDC173Q0VFZ6 552 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 PICALMQ13492 652 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 MOGSQ13724 837 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 VGLL4Q14135 290 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 ZSCAN23Q3MJ62 389 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 NOL9Q5SY16 702 aaKnown RBP8.99□□□□□ -0.97
LRRC28-211ENST00000558890 DCAF15Q66K64 600 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 CCDC83Q8IWF9 413 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 ANKRD13AQ8IZ07 590 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 SPDYE1Q8NFV5 336 aaPredicted RBP8.99□□□□□ -0.97
LRRC28-211ENST00000558890 STAG1Q8WVM7 1258 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 ZKSCAN4Q969J2 545 aaPredicted RBP8.99□□□□□ -0.97
LRRC28-211ENST00000558890 TRIM44Q96DX7 344 aaPredicted RBP8.99□□□□□ -0.97
LRRC28-211ENST00000558890 PANK2Q9BZ23 570 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 SERPINB13Q9UIV8 391 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 SYNPO2Q9UMS6 1093 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 DOCK1Q14185 1865 aa8.99□□□□□ -0.97
LRRC28-211ENST00000558890 ATAD5Q96QE3 1844 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 ZNF213O14771 459 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 STX6O43752 255 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 PDCP20941 246 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 RPS6KB1P23443 525 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 ECE1P42892 770 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 PDE4BQ07343 736 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 PPARAQ07869 468 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 NOGQ13253 232 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 TATDN1Q6P1N9 297 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 CTR9Q6PD62 1173 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 C16orf86Q6ZW13 317 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 FBXL16Q8N461 479 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 SDR42E1Q8WUS8 393 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 SLC10A4Q96EP9 437 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 WNK4Q96J92 1243 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 CCDC17Q96LX7 622 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 PTPN18Q99952 460 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 ZNF341Q9BYN7 854 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 MCM9Q9NXL9 1143 aa8.98□□□□□ -0.97
LRRC28-211ENST00000558890 SPDYE5A6NIY4 337 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 FAM196BA6NMK8 535 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 USP17L12C9JPN9 530 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 USP17L21D6R901 530 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 CTNND1O60716 968 aaKnown RBP8.97□□□□□ -0.97
LRRC28-211ENST00000558890 F13A1P00488 732 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 APPP05067 770 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 CYP21A2P08686 494 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 ZBTB48P10074 688 aaPredicted RBP8.97□□□□□ -0.97
LRRC28-211ENST00000558890 CYP2D6P10635 497 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 TTLL12Q14166 644 aaPredicted RBP8.97□□□□□ -0.97
LRRC28-211ENST00000558890 SHROOM1Q2M3G4 852 aaPredicted RBP8.97□□□□□ -0.97
LRRC28-211ENST00000558890 ADCK5Q3MIX3 580 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 CCDC178Q5BJE1 867 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 AKNAD1Q5T1N1 836 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 CCDC129Q6ZRS4 1044 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 GAS2L3Q86XJ1 694 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 TMEM87AQ8NBN3 555 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 GPT2Q8TD30 523 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 WRNIP1Q96S55 665 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 KRT23Q9C075 422 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 ALDH8A1Q9H2A2 487 aaPredicted RBP8.97□□□□□ -0.97
LRRC28-211ENST00000558890 ELP3Q9H9T3 547 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 KCNH4Q9UQ05 1017 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.97□□□□□ -0.97
LRRC28-211ENST00000558890 TACC3Q9Y6A5 838 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 THSD7BQ9C0I4 1608 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 OTOFQ9HC10 1997 aa8.97□□□□□ -0.97
LRRC28-211ENST00000558890 IRF6O14896 467 aa8.96□□□□□ -0.98
LRRC28-211ENST00000558890 POLR3DP05423 398 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-211ENST00000558890 CPA1P15085 419 aa8.96□□□□□ -0.98
LRRC28-211ENST00000558890 PTPRAP18433 802 aa8.96□□□□□ -0.98
LRRC28-211ENST00000558890 SYT1P21579 422 aa8.96□□□□□ -0.98
LRRC28-211ENST00000558890 GJB2P29033 226 aa8.96□□□□□ -0.98
LRRC28-211ENST00000558890 SHMT1P34896 483 aa8.96□□□□□ -0.98
LRRC28-211ENST00000558890 ERO1BQ86YB8 467 aa8.96□□□□□ -0.98
LRRC28-211ENST00000558890 R3HDMLQ9H3Y0 253 aa8.96□□□□□ -0.98
LRRC28-211ENST00000558890 TCP11L1Q9NUJ3 509 aa8.96□□□□□ -0.98
LRRC28-211ENST00000558890 SAP30BPQ9UHR5 308 aaKnown RBP8.96□□□□□ -0.98
LRRC28-211ENST00000558890 AFG3L2Q9Y4W6 797 aa8.96□□□□□ -0.98
LRRC28-211ENST00000558890 CYP2D7A0A087X1C5 515 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms