RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 CNTROBQ8N137 903 aa8.81□□□□□ -1
TRAF3-206ENST00000558880 ZBED3Q96IU2 234 aaPredicted RBP8.81□□□□□ -1
TRAF3-206ENST00000558880 CAPNS2Q96L46 248 aa8.81□□□□□ -1
TRAF3-206ENST00000558880 TMX4Q9H1E5 349 aaPredicted RBP8.81□□□□□ -1
TRAF3-206ENST00000558880 DENND2AQ9ULE3 1009 aa8.81□□□□□ -1
TRAF3-206ENST00000558880 USP17L3A6NCW0 530 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 USP17L4A6NCW7 530 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 FOXP2O15409 715 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 EGFRP00533 1210 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 EPHX2P34913 555 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 ECE1P42892 770 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 CHAF1AQ13111 956 aaPredicted RBP8.8□□□□□ -1
TRAF3-206ENST00000558880 USP17L1Q7RTZ2 530 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 SH3RF1Q7Z6J0 888 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 NIM1KQ8IY84 436 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 KBTBD3Q8NAB2 608 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 MTMR14Q8NCE2 650 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 NSUN4Q96CB9 384 aaKnown RBP8.8□□□□□ -1
TRAF3-206ENST00000558880 DNAJC2Q99543 621 aaKnown RBP8.8□□□□□ -1
TRAF3-206ENST00000558880 ARHGAP9Q9BRR9 750 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 PAG1Q9NWQ8 432 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 HACL1Q9UJ83 578 aa8.8□□□□□ -1
TRAF3-206ENST00000558880 AOC2O75106 756 aa8.79□□□□□ -1
TRAF3-206ENST00000558880 ADD2P35612 726 aa8.79□□□□□ -1
TRAF3-206ENST00000558880 MECOMQ03112 1051 aa8.79□□□□□ -1
TRAF3-206ENST00000558880 FMR1Q06787 632 aaKnown RBP eCLIP8.79□□□□□ -1
TRAF3-206ENST00000558880 MFSD14BQ5SR56 506 aa8.79□□□□□ -1
TRAF3-206ENST00000558880 GORABQ5T7V8 394 aa8.79□□□□□ -1
TRAF3-206ENST00000558880 CIAPIN1Q6FI81 312 aa8.79□□□□□ -1
TRAF3-206ENST00000558880 PDXDC2PQ6P474 469 aa8.79□□□□□ -1
TRAF3-206ENST00000558880 BANK1Q8NDB2 785 aa8.79□□□□□ -1
TRAF3-206ENST00000558880 GPKOWQ92917 476 aaPredicted RBP eCLIP8.79□□□□□ -1
TRAF3-206ENST00000558880 SEC62Q99442 399 aaKnown RBP8.79□□□□□ -1
TRAF3-206ENST00000558880 AAASQ9NRG9 546 aa8.79□□□□□ -1
TRAF3-206ENST00000558880 GNL3LQ9NVN8 582 aaKnown RBP8.79□□□□□ -1
TRAF3-206ENST00000558880 SCN4AP35499 1836 aa8.79□□□□□ -1
TRAF3-206ENST00000558880 GAKO14976 1311 aa8.79□□□□□ -1
TRAF3-206ENST00000558880 ERC2O15083 957 aa8.78□□□□□ -1
TRAF3-206ENST00000558880 GMPSP49915 693 aaPredicted RBP8.78□□□□□ -1
TRAF3-206ENST00000558880 HIRAP54198 1017 aaPredicted RBP8.78□□□□□ -1
TRAF3-206ENST00000558880 ZNF280AP59817 542 aaPredicted RBP8.78□□□□□ -1
TRAF3-206ENST00000558880 APOBEC3HQ6NTF7 200 aaKnown RBP8.78□□□□□ -1
TRAF3-206ENST00000558880 VPS37DQ86XT2 251 aa8.78□□□□□ -1
TRAF3-206ENST00000558880 WDR66Q8TBY9 1149 aa8.78□□□□□ -1
TRAF3-206ENST00000558880 JDP2Q8WYK2 163 aa8.78□□□□□ -1
TRAF3-206ENST00000558880 OSBP2Q969R2 916 aa8.78□□□□□ -1
TRAF3-206ENST00000558880 EVI5LQ96CN4 794 aa8.78□□□□□ -1
TRAF3-206ENST00000558880 OCSTAMPQ9BR26 566 aa8.78□□□□□ -1
TRAF3-206ENST00000558880 RIOK1Q9BRS2 568 aaKnown RBP8.78□□□□□ -1
TRAF3-206ENST00000558880 C1QTNF2Q9BXJ5 285 aa8.78□□□□□ -1
TRAF3-206ENST00000558880 DACH1Q9UI36 760 aa8.78□□□□□ -1
TRAF3-206ENST00000558880 THSD7BQ9C0I4 1608 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 A0A0D9SFI3 127 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 AXIN1O15169 862 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 AVPP01185 164 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 PDE6AP16499 860 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 CHMLP26374 656 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 RHBDL3P58872 404 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 C8orf34Q49A92 452 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 ZMYM1Q5SVZ6 1142 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 ZBTB33Q86T24 672 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 PNMA8AQ86V59 439 aaPredicted RBP8.77□□□□□ -1.01
TRAF3-206ENST00000558880 KIAA0825Q8IV33 1275 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 GPC2Q8N158 579 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 PNMA1Q8ND90 353 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 AGBL3Q8NEM8 1001 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 DPF2Q92785 391 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 FAM227BQ96M60 508 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 MRIQ9BWK5 157 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 PUS7LQ9H0K6 701 aaKnown RBP8.77□□□□□ -1.01
TRAF3-206ENST00000558880 ABCF2Q9UG63 623 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 SUGT1Q9Y2Z0 365 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 DAGLAQ9Y4D2 1042 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 ASTN2O75129 1339 aaPredicted RBP8.77□□□□□ -1.01
TRAF3-206ENST00000558880 ZNF532Q9HCE3 1301 aa8.77□□□□□ -1.01
TRAF3-206ENST00000558880 RFX7Q2KHR2 1363 aa8.76□□□□□ -1.01
TRAF3-206ENST00000558880 M0R2C6 588 aa8.76□□□□□ -1.01
TRAF3-206ENST00000558880 EPS15P42566 896 aa8.76□□□□□ -1.01
TRAF3-206ENST00000558880 PTK2Q05397 1052 aa8.76□□□□□ -1.01
TRAF3-206ENST00000558880 NNTQ13423 1086 aa8.76□□□□□ -1.01
TRAF3-206ENST00000558880 UBE3CQ15386 1083 aa8.76□□□□□ -1.01
TRAF3-206ENST00000558880 ZNF589Q86UQ0 364 aaPredicted RBP8.76□□□□□ -1.01
TRAF3-206ENST00000558880 MAGEB6Q8N7X4 407 aa8.76□□□□□ -1.01
TRAF3-206ENST00000558880 TRPM4Q8TD43 1214 aa8.76□□□□□ -1.01
TRAF3-206ENST00000558880 TBC1D22AQ8WUA7 517 aa8.76□□□□□ -1.01
TRAF3-206ENST00000558880 GPATCH3Q96I76 525 aa8.76□□□□□ -1.01
TRAF3-206ENST00000558880 PRMT6Q96LA8 375 aaPredicted RBP8.76□□□□□ -1.01
TRAF3-206ENST00000558880 TTF2Q9UNY4 1162 aaKnown RBP8.76□□□□□ -1.01
TRAF3-206ENST00000558880 ADAMTSL1Q8N6G6 1762 aa8.76□□□□□ -1.01
TRAF3-206ENST00000558880 PSME4Q14997 1843 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 GPR75-ASB3A0A0A6YYF3 556 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 F8W031 263 aaPredicted RBP8.75□□□□□ -1.01
TRAF3-206ENST00000558880 SMIM22K7EJ46 135 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 TRAF5O00463 557 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 RNF113AO15541 343 aaKnown RBP8.75□□□□□ -1.01
TRAF3-206ENST00000558880 IDH1O75874 414 aaKnown RBP8.75□□□□□ -1.01
TRAF3-206ENST00000558880 ADH1CP00326 375 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 CRKP46108 304 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 EIF6P56537 245 aaKnown RBP8.75□□□□□ -1.01
TRAF3-206ENST00000558880 DYNLL1P63167 89 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms