RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 AOX1Q06278 1338 aa7□□□□□ -1.29
LRRC28-208ENST00000558771 LAMA3Q16787 3333 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 A0A1W2PRU2 124 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 ELL2O00472 640 aaPredicted RBP6.99□□□□□ -1.29
LRRC28-208ENST00000558771 MYO1BO43795 1136 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 IGKV5-2P06315 115 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 IGHMBP2P38935 993 aaKnown RBP6.99□□□□□ -1.29
LRRC28-208ENST00000558771 USP4Q13107 963 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 ARHGEF6Q15052 776 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 TAF1CQ15572 869 aaPredicted RBP6.99□□□□□ -1.29
LRRC28-208ENST00000558771 CFAP100Q494V2 611 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 CYP2U1Q7Z449 544 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 SLC17A8Q8NDX2 589 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 SH3TC2Q8TF17 1288 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 CLUAP1Q96AJ1 413 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 OPTNQ96CV9 577 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 PRMT6Q96LA8 375 aaPredicted RBP6.99□□□□□ -1.29
LRRC28-208ENST00000558771 ELP3Q9H9T3 547 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 VEZTQ9HBM0 779 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 CD209Q9NNX6 404 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 DOLKQ9UPQ8 538 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 MAP3K2Q9Y2U5 619 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 ZSWIM8A7E2V4 1837 aa6.99□□□□□ -1.29
LRRC28-208ENST00000558771 CCL15-CCL14A0A0B4J2E2 113 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 F8W031 263 aaPredicted RBP6.98□□□□□ -1.29
LRRC28-208ENST00000558771 H3BM21 787 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 SNAP23O00161 211 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 MEN1O00255 615 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 DDX58O95786 925 aaKnown RBP6.98□□□□□ -1.29
LRRC28-208ENST00000558771 ZNF853P0CG23 659 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 RNF144AP50876 292 aaPredicted RBP6.98□□□□□ -1.29
LRRC28-208ENST00000558771 RASA3Q14644 834 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 CCL15Q16663 113 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 FOXD4L5Q5VV16 416 aaPredicted RBP6.98□□□□□ -1.29
LRRC28-208ENST00000558771 ERICH6Q7L0X2 663 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 RNF217Q8TC41 542 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 BRI3BPQ8WY22 251 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 RUNDC1Q96C34 613 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 ARHGAP39Q9C0H5 1083 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 ANKRD2Q9GZV1 360 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 ZFYVE28Q9HCC9 887 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 IRS2Q9Y4H2 1338 aa6.98□□□□□ -1.29
LRRC28-208ENST00000558771 PI4KAP2A4QPH2 592 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 POM121CA8CG34 1229 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 PPFIA3O75145 1194 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 ITGA6P23229 1130 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 KCNJ4P48050 445 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 RBM5P52756 815 aaKnown RBP eCLIP6.97□□□□□ -1.29
LRRC28-208ENST00000558771 PTSQ03393 145 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 CHRNDQ07001 517 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 MTFR1Q15390 333 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 CWF19L2Q2TBE0 894 aaKnown RBP6.97□□□□□ -1.29
LRRC28-208ENST00000558771 MAP7D1Q3KQU3 841 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 LCE2CQ5TA81 110 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 KSR2Q6VAB6 950 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.97□□□□□ -1.29
LRRC28-208ENST00000558771 FAM43AQ8N2R8 423 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 PI4KAP1Q8N8J0 262 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 DPF3Q92784 378 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 SHISA4Q96DD7 197 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 MPHOSPH8Q99549 860 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 PRO3102Q9H379 93 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 JAG2Q9Y219 1238 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 CUL9Q8IWT3 2517 aa6.97□□□□□ -1.29
LRRC28-208ENST00000558771 NEURL1BA8MQ27 555 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 H7C1W4 665 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 TLR2O60603 784 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 TAF5LO75529 589 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 GNRH1P01148 92 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 IL1R1P14778 569 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 GTF2A2P52657 109 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 FKBP1AP62942 108 aaKnown RBP6.96□□□□□ -1.3
LRRC28-208ENST00000558771 LACTBP83111 547 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-208ENST00000558771 TNFAIP1Q13829 316 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 VGLL4Q14135 290 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 KIF22Q14807 665 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 OXLD1Q5BKU9 147 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 C15orf52Q6ZUT6 534 aaKnown RBP6.96□□□□□ -1.3
LRRC28-208ENST00000558771 LYSMD3Q7Z3D4 306 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 UBE3BQ7Z3V4 1068 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 C8orf58Q8NAV2 365 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 PLPP7Q8NBV4 271 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 TEPSINQ96N21 525 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 PLA2G12BQ9BX93 195 aa6.96□□□□□ -1.3
LRRC28-208ENST00000558771 ZNF70Q9UC06 446 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-208ENST00000558771 A0A1B0GUL6 1792 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 SLC35F4A4IF30 521 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 BTBD19C9JJ37 291 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 PIK3CDO00329 1044 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 CSF1RP07333 972 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 GPC1P35052 558 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 CASP7P55210 303 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 PRMT2P55345 433 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 GNAI1P63096 354 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 NEXNQ0ZGT2 675 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 CLN3Q13286 438 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 RALBP1Q15311 655 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 CCDC30Q5VVM6 783 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 PRICKLE2Q7Z3G6 844 aa6.95□□□□□ -1.3
LRRC28-208ENST00000558771 ZNF804AQ7Z570 1209 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms