RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 TRIM47Q96LD4 638 aa14.07□□□□□ -0.16
SHF-204ENST00000558685 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.07□□□□□ -0.16
SHF-204ENST00000558685 KIAA1683Q9H0B3 1180 aa14.07□□□□□ -0.16
SHF-204ENST00000558685 CABP5Q9NP86 173 aa14.07□□□□□ -0.16
SHF-204ENST00000558685 MINDY4BA8MYZ0 360 aa14.06□□□□□ -0.16
SHF-204ENST00000558685 MPHOSPH10O00566 681 aaKnown RBP14.06□□□□□ -0.16
SHF-204ENST00000558685 PEX10O60683 326 aa14.06□□□□□ -0.16
SHF-204ENST00000558685 RASA1P20936 1047 aa14.06□□□□□ -0.16
SHF-204ENST00000558685 NMIQ13287 307 aaPredicted RBP14.06□□□□□ -0.16
SHF-204ENST00000558685 ZYXQ15942 572 aaKnown RBP14.06□□□□□ -0.16
SHF-204ENST00000558685 KIAA1755Q5JYT7 1200 aa14.06□□□□□ -0.16
SHF-204ENST00000558685 USP17L2Q6R6M4 530 aa14.06□□□□□ -0.16
SHF-204ENST00000558685 TMEM179Q6ZVK1 233 aa14.06□□□□□ -0.16
SHF-204ENST00000558685 C12orf42Q96LP6 360 aa14.06□□□□□ -0.16
SHF-204ENST00000558685 P2RX7Q99572 595 aaKnown RBP14.06□□□□□ -0.16
SHF-204ENST00000558685 TMOD4Q9NZQ9 345 aa14.06□□□□□ -0.16
SHF-204ENST00000558685 ROBO3Q96MS0 1386 aa14.06□□□□□ -0.16
SHF-204ENST00000558685 TRIM6-TRIM34B2RNG4 842 aa14.05□□□□□ -0.16
SHF-204ENST00000558685 APPP05067 770 aa14.05□□□□□ -0.16
SHF-204ENST00000558685 PSMC4P43686 418 aa14.05□□□□□ -0.16
SHF-204ENST00000558685 TDO2P48775 406 aa14.05□□□□□ -0.16
SHF-204ENST00000558685 ZNF589Q86UQ0 364 aaPredicted RBP14.05□□□□□ -0.16
SHF-204ENST00000558685 TICAM2Q86XR7 235 aa14.05□□□□□ -0.16
SHF-204ENST00000558685 STK11IPQ8N1F8 1099 aa14.05□□□□□ -0.16
SHF-204ENST00000558685 ANKRD13CQ8N6S4 541 aa14.05□□□□□ -0.16
SHF-204ENST00000558685 SMCR8Q8TEV9 937 aaPredicted RBP14.05□□□□□ -0.16
SHF-204ENST00000558685 RILPL2Q969X0 211 aa14.05□□□□□ -0.16
SHF-204ENST00000558685 CCDC17Q96LX7 622 aa14.05□□□□□ -0.16
SHF-204ENST00000558685 HELLSQ9NRZ9 838 aa14.05□□□□□ -0.16
SHF-204ENST00000558685 TACC3Q9Y6A5 838 aa14.05□□□□□ -0.16
SHF-204ENST00000558685 GSPT1P15170 499 aaKnown RBP14.04□□□□□ -0.16
SHF-204ENST00000558685 VCAM1P19320 739 aa14.04□□□□□ -0.16
SHF-204ENST00000558685 SDSP20132 328 aa14.04□□□□□ -0.16
SHF-204ENST00000558685 AMOTL1Q8IY63 956 aa14.04□□□□□ -0.16
SHF-204ENST00000558685 FEZ1Q99689 392 aa14.04□□□□□ -0.16
SHF-204ENST00000558685 TXNRD2Q9NNW7 524 aa14.04□□□□□ -0.16
SHF-204ENST00000558685 PNMA3Q9UL41 463 aa14.04□□□□□ -0.16
SHF-204ENST00000558685 PTCH2Q9Y6C5 1203 aa14.04□□□□□ -0.16
SHF-204ENST00000558685 PRDM1O75626 825 aa14.03□□□□□ -0.16
SHF-204ENST00000558685 OSBPP22059 807 aa14.03□□□□□ -0.16
SHF-204ENST00000558685 PABPC4Q13310 644 aaKnown RBP eCLIP14.03□□□□□ -0.16
SHF-204ENST00000558685 MCMDC2Q4G0Z9 681 aa14.03□□□□□ -0.16
SHF-204ENST00000558685 NACAP1Q9BZK3 213 aa14.03□□□□□ -0.16
SHF-204ENST00000558685 INCENPQ9NQS7 918 aa14.03□□□□□ -0.16
SHF-204ENST00000558685 RBPJLQ9UBG7 517 aa14.03□□□□□ -0.16
SHF-204ENST00000558685 TMX2Q9Y320 296 aa14.03□□□□□ -0.16
SHF-204ENST00000558685 IGKV6D-41A0A0C4DH26 115 aa14.02□□□□□ -0.17
SHF-204ENST00000558685 FMNL1O95466 1100 aaPredicted RBP14.02□□□□□ -0.17
SHF-204ENST00000558685 EEF2P13639 858 aaKnown RBP14.02□□□□□ -0.17
SHF-204ENST00000558685 GCLCP48506 637 aaPredicted RBP14.02□□□□□ -0.17
SHF-204ENST00000558685 USP14P54578 494 aa14.02□□□□□ -0.17
SHF-204ENST00000558685 HERVK_113P62684 666 aa14.02□□□□□ -0.17
SHF-204ENST00000558685 IRX3P78415 501 aaPredicted RBP14.02□□□□□ -0.17
SHF-204ENST00000558685 ICA1Q05084 483 aa14.02□□□□□ -0.17
SHF-204ENST00000558685 PPARAQ07869 468 aa14.02□□□□□ -0.17
SHF-204ENST00000558685 KIF22Q14807 665 aa14.02□□□□□ -0.17
SHF-204ENST00000558685 ALX1Q15699 326 aa14.02□□□□□ -0.17
SHF-204ENST00000558685 FAM110CQ1W6H9 321 aa14.02□□□□□ -0.17
SHF-204ENST00000558685 TTC22Q5TAA0 569 aa14.02□□□□□ -0.17
SHF-204ENST00000558685 CATSPERGQ6ZRH7 1159 aa14.02□□□□□ -0.17
SHF-204ENST00000558685 NAPBQ9H115 298 aa14.02□□□□□ -0.17
SHF-204ENST00000558685 MORF4L1Q9UBU8 362 aa14.02□□□□□ -0.17
SHF-204ENST00000558685 SRRDQ9UH36 339 aa14.02□□□□□ -0.17
SHF-204ENST00000558685 GREB1LQ9C091 1923 aaPredicted RBP14.02□□□□□ -0.17
SHF-204ENST00000558685 USP17L15C9J2P7 530 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 USP17L13C9JLJ4 530 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 USP17L11C9JVI0 530 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 USP17L18D6R9N7 530 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 USP17L22D6RA61 530 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 USP17L17D6RBQ6 530 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 USP17L19D6RCP7 530 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 USP17L20D6RJB6 530 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 CNMDO75829 334 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 GNRH1P01148 92 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 FGAP02671 866 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 HSPD1P10809 573 aaKnown RBP14.01□□□□□ -0.17
SHF-204ENST00000558685 CTDSPL2Q05D32 466 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 USP17L24Q0WX57 530 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 ARHGEF6Q15052 776 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 Q3C1V9 767 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 ARMC5Q96C12 935 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 IL25Q9H293 177 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 RPAP3Q9H6T3 665 aaPredicted RBP14.01□□□□□ -0.17
SHF-204ENST00000558685 KANSL2Q9H9L4 492 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 MKNK2Q9HBH9 465 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 GABRQQ9UN88 632 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.01□□□□□ -0.17
SHF-204ENST00000558685 DOCK3Q8IZD9 2030 aa14.01□□□□□ -0.17
SHF-204ENST00000558685 MYH8P13535 1937 aa14□□□□□ -0.17
SHF-204ENST00000558685 CCDC171Q6TFL3 1326 aa14□□□□□ -0.17
SHF-204ENST00000558685 RGS19P49795 217 aa14□□□□□ -0.17
SHF-204ENST00000558685 FCGRTP55899 365 aa14□□□□□ -0.17
SHF-204ENST00000558685 SOX10P56693 466 aa14□□□□□ -0.17
SHF-204ENST00000558685 PRKCZQ05513 592 aa14□□□□□ -0.17
SHF-204ENST00000558685 CWC27Q6UX04 472 aaKnown RBP14□□□□□ -0.17
SHF-204ENST00000558685 SKAP1Q86WV1 359 aa14□□□□□ -0.17
SHF-204ENST00000558685 SPICE1Q8N0Z3 855 aa14□□□□□ -0.17
SHF-204ENST00000558685 ANAPC4Q9UJX5 808 aa14□□□□□ -0.17
SHF-204ENST00000558685 KIAA0100Q14667 2235 aaKnown RBP14□□□□□ -0.17
SHF-204ENST00000558685 CENPFP49454 3210 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms