RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 SLAIN1Q8ND83 568 aa18.59■□□□□ 0.57
LINC01220-201ENST00000558575 HOOK2Q96ED9 719 aa18.59■□□□□ 0.57
LINC01220-201ENST00000558575 ZNF341Q9BYN7 854 aa18.59■□□□□ 0.57
LINC01220-201ENST00000558575 IL25Q9H293 177 aa18.59■□□□□ 0.57
LINC01220-201ENST00000558575 DNAJC18Q9H819 358 aa18.59■□□□□ 0.57
LINC01220-201ENST00000558575 EPB41L4AQ9HCS5 686 aaPredicted RBP18.59■□□□□ 0.57
LINC01220-201ENST00000558575 CDK5RAP2Q96SN8 1893 aa18.58■□□□□ 0.57
LINC01220-201ENST00000558575 CYP2D7A0A087X1C5 515 aa18.58■□□□□ 0.56
LINC01220-201ENST00000558575 PATL2C9JE40 543 aaKnown RBP18.58■□□□□ 0.56
LINC01220-201ENST00000558575 PDHXO00330 501 aa18.58■□□□□ 0.56
LINC01220-201ENST00000558575 INPP5BP32019 993 aa18.58■□□□□ 0.56
LINC01220-201ENST00000558575 VPS53Q5VIR6 699 aa18.58■□□□□ 0.56
LINC01220-201ENST00000558575 DCAF15Q66K64 600 aa18.58■□□□□ 0.56
LINC01220-201ENST00000558575 ANKRD23Q86SG2 305 aa18.58■□□□□ 0.56
LINC01220-201ENST00000558575 FOXP4Q8IVH2 680 aaPredicted RBP18.58■□□□□ 0.56
LINC01220-201ENST00000558575 DIS3LQ8TF46 1054 aaKnown RBP18.58■□□□□ 0.56
LINC01220-201ENST00000558575 PAWRQ96IZ0 340 aaKnown RBP18.58■□□□□ 0.56
LINC01220-201ENST00000558575 MCM9Q9NXL9 1143 aa18.58■□□□□ 0.56
LINC01220-201ENST00000558575 ZMYND8Q9ULU4 1186 aaPredicted RBP18.58■□□□□ 0.56
LINC01220-201ENST00000558575 EYSQ5T1H1 3165 aa18.57■□□□□ 0.56
LINC01220-201ENST00000558575 USP17L12C9JPN9 530 aa18.57■□□□□ 0.56
LINC01220-201ENST00000558575 USP17L21D6R901 530 aa18.57■□□□□ 0.56
LINC01220-201ENST00000558575 ELNP15502 786 aa18.57■□□□□ 0.56
LINC01220-201ENST00000558575 CHMLP26374 656 aa18.57■□□□□ 0.56
LINC01220-201ENST00000558575 MOGSQ13724 837 aa18.57■□□□□ 0.56
LINC01220-201ENST00000558575 BMP2KLQ5H9B9 411 aa18.57■□□□□ 0.56
LINC01220-201ENST00000558575 CTR9Q6PD62 1173 aa18.57■□□□□ 0.56
LINC01220-201ENST00000558575 CWC27Q6UX04 472 aaKnown RBP18.57■□□□□ 0.56
LINC01220-201ENST00000558575 C7orf61Q8IZ16 206 aa18.57■□□□□ 0.56
LINC01220-201ENST00000558575 DEFB118Q96PH6 123 aa18.57■□□□□ 0.56
LINC01220-201ENST00000558575 PHIPQ8WWQ0 1821 aa18.57■□□□□ 0.56
LINC01220-201ENST00000558575 TFRCP02786 760 aaKnown RBP18.56■□□□□ 0.56
LINC01220-201ENST00000558575 INHAP05111 366 aa18.56■□□□□ 0.56
LINC01220-201ENST00000558575 BCRP11274 1271 aa18.56■□□□□ 0.56
LINC01220-201ENST00000558575 GNAT2P19087 354 aa18.56■□□□□ 0.56
LINC01220-201ENST00000558575 GABPAQ06546 454 aa18.56■□□□□ 0.56
LINC01220-201ENST00000558575 C12orf60Q5U649 245 aa18.56■□□□□ 0.56
LINC01220-201ENST00000558575 GIMAP6Q6P9H5 292 aa18.56■□□□□ 0.56
LINC01220-201ENST00000558575 TTC6Q86TZ1 520 aa18.56■□□□□ 0.56
LINC01220-201ENST00000558575 IFNL3Q8IZI9 196 aa18.56■□□□□ 0.56
LINC01220-201ENST00000558575 CRISPLD2Q9H0B8 497 aa18.56■□□□□ 0.56
LINC01220-201ENST00000558575 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.56■□□□□ 0.56
LINC01220-201ENST00000558575 FOCADQ5VW36 1801 aa18.56■□□□□ 0.56
LINC01220-201ENST00000558575 HIP1O00291 1037 aa18.55■□□□□ 0.56
LINC01220-201ENST00000558575 ADCY3O60266 1144 aa18.55■□□□□ 0.56
LINC01220-201ENST00000558575 POLR3DP05423 398 aaPredicted RBP18.55■□□□□ 0.56
LINC01220-201ENST00000558575 FCGRTP55899 365 aa18.55■□□□□ 0.56
LINC01220-201ENST00000558575 JAG1P78504 1218 aa18.55■□□□□ 0.56
LINC01220-201ENST00000558575 EHD4Q9H223 541 aa18.55■□□□□ 0.56
LINC01220-201ENST00000558575 PAK6Q9NQU5 681 aaPredicted RBP18.55■□□□□ 0.56
LINC01220-201ENST00000558575 DIAPH3Q9NSV4 1193 aa18.55■□□□□ 0.56
LINC01220-201ENST00000558575 HERC5Q9UII4 1024 aaKnown RBP18.55■□□□□ 0.56
LINC01220-201ENST00000558575 LAMA2P24043 3122 aaKnown RBP18.55■□□□□ 0.56
LINC01220-201ENST00000558575 PLXNB2O15031 1838 aa18.54■□□□□ 0.56
LINC01220-201ENST00000558575 SIPA1L1O43166 1804 aa18.54■□□□□ 0.56
LINC01220-201ENST00000558575 PPATQ06203 517 aa18.54■□□□□ 0.56
LINC01220-201ENST00000558575 SBK1Q52WX2 424 aa18.54■□□□□ 0.56
LINC01220-201ENST00000558575 TDHQ8IZJ6 230 aa18.54■□□□□ 0.56
LINC01220-201ENST00000558575 DYNLL2Q96FJ2 89 aa18.54■□□□□ 0.56
LINC01220-201ENST00000558575 CCDC171Q6TFL3 1326 aa18.53■□□□□ 0.56
LINC01220-201ENST00000558575 APPP05067 770 aa18.53■□□□□ 0.56
LINC01220-201ENST00000558575 HLA-DOAP06340 250 aa18.53■□□□□ 0.56
LINC01220-201ENST00000558575 HSPD1P10809 573 aaKnown RBP18.53■□□□□ 0.56
LINC01220-201ENST00000558575 SYN1P17600 705 aa18.53■□□□□ 0.56
LINC01220-201ENST00000558575 MAGEA10P43363 369 aaPredicted RBP18.53■□□□□ 0.56
LINC01220-201ENST00000558575 SHROOM1Q2M3G4 852 aaPredicted RBP18.53■□□□□ 0.56
LINC01220-201ENST00000558575 NOL9Q5SY16 702 aaKnown RBP18.53■□□□□ 0.56
LINC01220-201ENST00000558575 TATDN1Q6P1N9 297 aa18.53■□□□□ 0.56
LINC01220-201ENST00000558575 SERPINB13Q9UIV8 391 aa18.53■□□□□ 0.56
LINC01220-201ENST00000558575 KCNH4Q9UQ05 1017 aa18.53■□□□□ 0.56
LINC01220-201ENST00000558575 CTNND1O60716 968 aaKnown RBP18.52■□□□□ 0.56
LINC01220-201ENST00000558575 CYP2C8P10632 490 aa18.52■□□□□ 0.56
LINC01220-201ENST00000558575 SHMT1P34896 483 aa18.52■□□□□ 0.56
LINC01220-201ENST00000558575 FLT3LGP49771 235 aa18.52■□□□□ 0.56
LINC01220-201ENST00000558575 ALX1Q15699 326 aa18.52■□□□□ 0.56
LINC01220-201ENST00000558575 NECAB2Q7Z6G3 386 aa18.52■□□□□ 0.56
LINC01220-201ENST00000558575 SLC44A5Q8NCS7 719 aa18.52■□□□□ 0.56
LINC01220-201ENST00000558575 GUCD1Q96NT3 240 aa18.52■□□□□ 0.56
LINC01220-201ENST00000558575 RPTORQ8N122 1335 aa18.51■□□□□ 0.55
LINC01220-201ENST00000558575 MYH1P12882 1939 aa18.51■□□□□ 0.55
LINC01220-201ENST00000558575 FGAP02671 866 aa18.51■□□□□ 0.55
LINC01220-201ENST00000558575 CAP2P40123 477 aa18.51■□□□□ 0.55
LINC01220-201ENST00000558575 GPAT2Q6NUI2 795 aa18.51■□□□□ 0.55
LINC01220-201ENST00000558575 CRACR2BQ8N4Y2 399 aaPredicted RBP18.51■□□□□ 0.55
LINC01220-201ENST00000558575 PRDM6Q9NQX0 595 aa18.51■□□□□ 0.55
LINC01220-201ENST00000558575 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.51■□□□□ 0.55
LINC01220-201ENST00000558575 PRUNE2Q8WUY3 3088 aa18.51■□□□□ 0.55
LINC01220-201ENST00000558575 FRMPD3Q5JV73 1810 aa18.51■□□□□ 0.55
LINC01220-201ENST00000558575 MINDY4BA8MYZ0 360 aa18.5■□□□□ 0.55
LINC01220-201ENST00000558575 CCDC84Q86UT8 332 aaPredicted RBP18.5■□□□□ 0.55
LINC01220-201ENST00000558575 SCYL3Q8IZE3 742 aa18.5■□□□□ 0.55
LINC01220-201ENST00000558575 PXYLP1Q8TE99 480 aa18.5■□□□□ 0.55
LINC01220-201ENST00000558575 DDRGK1Q96HY6 314 aa18.5■□□□□ 0.55
LINC01220-201ENST00000558575 PARK7Q99497 189 aaKnown RBP18.5■□□□□ 0.55
LINC01220-201ENST00000558575 ARPP21Q9UBL0 812 aaPredicted RBP18.5■□□□□ 0.55
LINC01220-201ENST00000558575 TACC3Q9Y6A5 838 aa18.5■□□□□ 0.55
LINC01220-201ENST00000558575 DOCK1Q14185 1865 aa18.5■□□□□ 0.55
LINC01220-201ENST00000558575 BAZ2AQ9UIF9 1905 aaKnown RBP18.49■□□□□ 0.55
LINC01220-201ENST00000558575 SGSM2O43147 1006 aa18.49■□□□□ 0.55
LINC01220-201ENST00000558575 CAPN2P17655 700 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms