RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 LDLRAD1Q5T700 205 aa8.3□□□□□ -1.08
COPS2-204ENST00000558545 FBXL19Q6PCT2 694 aa8.3□□□□□ -1.08
COPS2-204ENST00000558545 FAM13CQ8NE31 585 aa8.3□□□□□ -1.08
COPS2-204ENST00000558545 PIWIL2Q8TC59 973 aaKnown RBP8.3□□□□□ -1.08
COPS2-204ENST00000558545 REV1Q9UBZ9 1251 aa8.3□□□□□ -1.08
COPS2-204ENST00000558545 SUPT16HQ9Y5B9 1047 aaKnown RBP8.3□□□□□ -1.08
COPS2-204ENST00000558545 HTR3BO95264 441 aa8.29□□□□□ -1.08
COPS2-204ENST00000558545 CBX7O95931 251 aa8.29□□□□□ -1.08
COPS2-204ENST00000558545 EIF4A3P38919 411 aaKnown RBP8.29□□□□□ -1.08
COPS2-204ENST00000558545 MFAP1P55081 439 aaKnown RBP8.29□□□□□ -1.08
COPS2-204ENST00000558545 ZP2Q05996 745 aa8.29□□□□□ -1.08
COPS2-204ENST00000558545 LRRN4CLQ8ND94 238 aa8.29□□□□□ -1.08
COPS2-204ENST00000558545 UPK3BL1B0FP48 263 aa8.28□□□□□ -1.08
COPS2-204ENST00000558545 UPK3BL2E5RIL1 263 aa8.28□□□□□ -1.08
COPS2-204ENST00000558545 TNK2Q07912 1038 aa8.28□□□□□ -1.08
COPS2-204ENST00000558545 CWF19L2Q2TBE0 894 aaKnown RBP8.28□□□□□ -1.08
COPS2-204ENST00000558545 CDKAL1Q5VV42 579 aa8.28□□□□□ -1.08
COPS2-204ENST00000558545 FLAD1Q8NFF5 587 aa8.28□□□□□ -1.08
COPS2-204ENST00000558545 FBXO27Q8NI29 283 aa8.28□□□□□ -1.08
COPS2-204ENST00000558545 ATP13A1Q9HD20 1204 aa8.28□□□□□ -1.08
COPS2-204ENST00000558545 GGT7Q9UJ14 662 aa8.28□□□□□ -1.08
COPS2-204ENST00000558545 H3BS24 57 aa8.27□□□□□ -1.09
COPS2-204ENST00000558545 Q96M66 194 aa8.27□□□□□ -1.09
COPS2-204ENST00000558545 RBM47A0AV96 593 aaKnown RBP8.26□□□□□ -1.09
COPS2-204ENST00000558545 GRIN3BO60391 1043 aa8.26□□□□□ -1.09
COPS2-204ENST00000558545 ATE1O95260 518 aa8.26□□□□□ -1.09
COPS2-204ENST00000558545 ZNF296Q8WUU4 475 aaPredicted RBP8.26□□□□□ -1.09
COPS2-204ENST00000558545 GOLGA2P5Q9HBQ8 144 aa8.26□□□□□ -1.09
COPS2-204ENST00000558545 RNF141Q8WVD5 230 aa8.25□□□□□ -1.09
COPS2-204ENST00000558545 CCDC74BQ96LY2 380 aa8.25□□□□□ -1.09
COPS2-204ENST00000558545 PRDM7Q9NQW5 492 aa8.25□□□□□ -1.09
COPS2-204ENST00000558545 ADAMTS1Q9UHI8 967 aa8.25□□□□□ -1.09
COPS2-204ENST00000558545 CARMIL2Q6F5E8 1435 aa8.24□□□□□ -1.09
COPS2-204ENST00000558545 CHURC1-FNTBB4DL54 471 aa8.24□□□□□ -1.09
COPS2-204ENST00000558545 DNAJA2O60884 412 aa8.24□□□□□ -1.09
COPS2-204ENST00000558545 SRFP11831 508 aa8.24□□□□□ -1.09
COPS2-204ENST00000558545 TMPRSS7Q7RTY8 843 aa8.24□□□□□ -1.09
COPS2-204ENST00000558545 TMEM87AQ8NBN3 555 aa8.24□□□□□ -1.09
COPS2-204ENST00000558545 GPR62Q9BZJ7 368 aa8.24□□□□□ -1.09
COPS2-204ENST00000558545 EHMT1Q9H9B1 1298 aa8.24□□□□□ -1.09
COPS2-204ENST00000558545 CARS2Q9HA77 564 aaKnown RBP8.24□□□□□ -1.09
COPS2-204ENST00000558545 CTNND2Q9UQB3 1225 aa8.24□□□□□ -1.09
COPS2-204ENST00000558545 TLR3O15455 904 aaKnown RBP8.23□□□□□ -1.09
COPS2-204ENST00000558545 MLECQ14165 292 aa8.23□□□□□ -1.09
COPS2-204ENST00000558545 KRTAP19-1Q8IUB9 90 aa8.23□□□□□ -1.09
COPS2-204ENST00000558545 REXO1Q8N1G1 1221 aaKnown RBP8.23□□□□□ -1.09
COPS2-204ENST00000558545 DTWD2Q8NBA8 298 aa8.23□□□□□ -1.09
COPS2-204ENST00000558545 UBE2FQ969M7 185 aa8.23□□□□□ -1.09
COPS2-204ENST00000558545 NT5C1AQ9BXI3 368 aa8.23□□□□□ -1.09
COPS2-204ENST00000558545 DUSP15Q9H1R2 295 aaPredicted RBP8.23□□□□□ -1.09
COPS2-204ENST00000558545 BRMS1Q9HCU9 246 aa8.23□□□□□ -1.09
COPS2-204ENST00000558545 METTL5Q9NRN9 209 aaKnown RBP8.23□□□□□ -1.09
COPS2-204ENST00000558545 KLHL3Q9UH77 587 aa8.23□□□□□ -1.09
COPS2-204ENST00000558545 KCNH3Q9ULD8 1083 aa8.23□□□□□ -1.09
COPS2-204ENST00000558545 VAMP1P23763 118 aa8.22□□□□□ -1.09
COPS2-204ENST00000558545 CRKP46108 304 aa8.22□□□□□ -1.09
COPS2-204ENST00000558545 GAB4Q2WGN9 574 aa8.22□□□□□ -1.09
COPS2-204ENST00000558545 CCDC120Q96HB5 630 aa8.22□□□□□ -1.09
COPS2-204ENST00000558545 ASPNQ9BXN1 380 aa8.22□□□□□ -1.09
COPS2-204ENST00000558545 BACH2Q9BYV9 841 aa8.22□□□□□ -1.09
COPS2-204ENST00000558545 TRIT1Q9H3H1 467 aaKnown RBP8.22□□□□□ -1.09
COPS2-204ENST00000558545 GMIPQ9P107 970 aa8.22□□□□□ -1.09
COPS2-204ENST00000558545 ZSWIM5Q9P217 1185 aa8.22□□□□□ -1.09
COPS2-204ENST00000558545 PCDHB14Q9Y5E9 798 aa8.22□□□□□ -1.09
COPS2-204ENST00000558545 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.22□□□□□ -1.09
COPS2-204ENST00000558545 SLC22A31A6NKX4 558 aa8.21□□□□□ -1.1
COPS2-204ENST00000558545 RGS13O14921 159 aa8.21□□□□□ -1.1
COPS2-204ENST00000558545 ZNF76P36508 570 aa8.21□□□□□ -1.1
COPS2-204ENST00000558545 FANCCQ00597 558 aa8.21□□□□□ -1.1
COPS2-204ENST00000558545 POU5F2Q8N7G0 328 aa8.21□□□□□ -1.1
COPS2-204ENST00000558545 BAHD1Q8TBE0 780 aaPredicted RBP8.21□□□□□ -1.1
COPS2-204ENST00000558545 TMEM40Q8WWA1 233 aa8.21□□□□□ -1.1
COPS2-204ENST00000558545 FAM168AQ92567 244 aa8.21□□□□□ -1.1
COPS2-204ENST00000558545 VWCEQ96DN2 955 aa8.21□□□□□ -1.1
COPS2-204ENST00000558545 KREMEN1Q96MU8 473 aa8.21□□□□□ -1.1
COPS2-204ENST00000558545 RBAK-RBAKDNI3L0D1 243 aa8.2□□□□□ -1.1
COPS2-204ENST00000558545 ESR1P03372 595 aa8.2□□□□□ -1.1
COPS2-204ENST00000558545 GDNFP39905 211 aa8.2□□□□□ -1.1
COPS2-204ENST00000558545 CDCP2Q5VXM1 449 aa8.2□□□□□ -1.1
COPS2-204ENST00000558545 OGFOD2Q6N063 350 aa8.2□□□□□ -1.1
COPS2-204ENST00000558545 SLITRK4Q8IW52 837 aa8.2□□□□□ -1.1
COPS2-204ENST00000558545 PHACTR4Q8IZ21 702 aa8.2□□□□□ -1.1
COPS2-204ENST00000558545 C19orf73Q9NVV2 129 aa8.2□□□□□ -1.1
COPS2-204ENST00000558545 GPATCH2Q9NW75 528 aa8.2□□□□□ -1.1
COPS2-204ENST00000558545 UBP1Q9NZI7 540 aa8.2□□□□□ -1.1
COPS2-204ENST00000558545 TNNI2P48788 182 aa8.19□□□□□ -1.1
COPS2-204ENST00000558545 APOBRQ0VD83 1088 aa8.19□□□□□ -1.1
COPS2-204ENST00000558545 TSPYL5Q86VY4 417 aaPredicted RBP8.19□□□□□ -1.1
COPS2-204ENST00000558545 ALPK1Q96QP1 1244 aa8.19□□□□□ -1.1
COPS2-204ENST00000558545 KIF2CQ99661 725 aa8.19□□□□□ -1.1
COPS2-204ENST00000558545 TPP2P29144 1249 aaPredicted RBP8.18□□□□□ -1.1
COPS2-204ENST00000558545 AFMP43652 599 aa8.18□□□□□ -1.1
COPS2-204ENST00000558545 ZNF165P49910 485 aa8.18□□□□□ -1.1
COPS2-204ENST00000558545 SEZ6Q53EL9 994 aa8.18□□□□□ -1.1
COPS2-204ENST00000558545 ZSWIM9Q86XI8 627 aa8.18□□□□□ -1.1
COPS2-204ENST00000558545 KIAA0825Q8IV33 1275 aa8.18□□□□□ -1.1
COPS2-204ENST00000558545 CNNM2Q9H8M5 875 aa8.18□□□□□ -1.1
COPS2-204ENST00000558545 MEIS3P2A8K0S8 358 aa8.17□□□□□ -1.1
COPS2-204ENST00000558545 UBOX5O94941 541 aa8.17□□□□□ -1.1
COPS2-204ENST00000558545 GBP1P32455 592 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms