RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 WDR18Q9BV38 432 aa20.64■□□□□ 0.89
TPM1-214ENST00000558544 CCL15-CCL14A0A0B4J2E2 113 aa20.63■□□□□ 0.89
TPM1-214ENST00000558544 MANSC4A6NHS7 340 aaPredicted RBP20.63■□□□□ 0.89
TPM1-214ENST00000558544 B4E1Z4 1266 aa20.63■□□□□ 0.89
TPM1-214ENST00000558544 CXCL11O14625 94 aa20.63■□□□□ 0.89
TPM1-214ENST00000558544 CCL15Q16663 113 aa20.63■□□□□ 0.89
TPM1-214ENST00000558544 C8orf34Q49A92 452 aa20.63■□□□□ 0.89
TPM1-214ENST00000558544 STOX1Q6ZVD7 989 aa20.63■□□□□ 0.89
TPM1-214ENST00000558544 NEDD1Q8NHV4 660 aa20.63■□□□□ 0.89
TPM1-214ENST00000558544 ACER1Q8TDN7 264 aa20.63■□□□□ 0.89
TPM1-214ENST00000558544 IGKV6D-41A0A0C4DH26 115 aa20.62■□□□□ 0.89
TPM1-214ENST00000558544 A0A0G2JLL6 359 aaPredicted RBP20.62■□□□□ 0.89
TPM1-214ENST00000558544 E7EWF7 191 aa20.62■□□□□ 0.89
TPM1-214ENST00000558544 ATP2B2Q01814 1243 aa20.62■□□□□ 0.89
TPM1-214ENST00000558544 SREBF2Q12772 1141 aa20.62■□□□□ 0.89
TPM1-214ENST00000558544 DGKZQ13574 1117 aa20.62■□□□□ 0.89
TPM1-214ENST00000558544 MTMR2Q13614 643 aa20.62■□□□□ 0.89
TPM1-214ENST00000558544 PRRT2Q7Z6L0 340 aaPredicted RBP20.62■□□□□ 0.89
TPM1-214ENST00000558544 ESR2Q92731 530 aa20.62■□□□□ 0.89
TPM1-214ENST00000558544 CNNM2Q9H8M5 875 aa20.62■□□□□ 0.89
TPM1-214ENST00000558544 KANSL2Q9H9L4 492 aa20.62■□□□□ 0.89
TPM1-214ENST00000558544 KDM4AO75164 1064 aa20.61■□□□□ 0.89
TPM1-214ENST00000558544 CETPP11597 493 aa20.61■□□□□ 0.89
TPM1-214ENST00000558544 ZYXQ15942 572 aaKnown RBP20.61■□□□□ 0.89
TPM1-214ENST00000558544 RNF20Q5VTR2 975 aa20.61■□□□□ 0.89
TPM1-214ENST00000558544 BRI3BPQ8WY22 251 aa20.61■□□□□ 0.89
TPM1-214ENST00000558544 CEP95Q96GE4 821 aa20.61■□□□□ 0.89
TPM1-214ENST00000558544 FEZ1Q99689 392 aa20.61■□□□□ 0.89
TPM1-214ENST00000558544 KRT23Q9C075 422 aa20.61■□□□□ 0.89
TPM1-214ENST00000558544 A0A1W2PRG0 241 aa20.6■□□□□ 0.89
TPM1-214ENST00000558544 USP17L10C9JJH3 530 aa20.6■□□□□ 0.89
TPM1-214ENST00000558544 NMT2O60551 498 aa20.6■□□□□ 0.89
TPM1-214ENST00000558544 EEF2P13639 858 aaKnown RBP20.6■□□□□ 0.89
TPM1-214ENST00000558544 HMGCS2P54868 508 aa20.6■□□□□ 0.89
TPM1-214ENST00000558544 BACE1P56817 501 aa20.6■□□□□ 0.89
TPM1-214ENST00000558544 TRDNQ13061 729 aa20.6■□□□□ 0.89
TPM1-214ENST00000558544 GADL1Q6ZQY3 521 aa20.6■□□□□ 0.89
TPM1-214ENST00000558544 SIAH1Q8IUQ4 282 aa20.6■□□□□ 0.89
TPM1-214ENST00000558544 ARHGEF10LQ9HCE6 1279 aa20.6■□□□□ 0.89
TPM1-214ENST00000558544 TESPA1A2RU30 521 aaPredicted RBP20.59■□□□□ 0.89
TPM1-214ENST00000558544 MOGSQ13724 837 aa20.59■□□□□ 0.89
TPM1-214ENST00000558544 RALYLQ86SE5 291 aaKnown RBP20.59■□□□□ 0.89
TPM1-214ENST00000558544 USP26Q9BXU7 913 aa20.59■□□□□ 0.89
TPM1-214ENST00000558544 IL17RBQ9NRM6 502 aa20.59■□□□□ 0.89
TPM1-214ENST00000558544 MTMR4Q9NYA4 1195 aa20.59■□□□□ 0.89
TPM1-214ENST00000558544 IGF2BP3O00425 579 aaKnown RBP eCLIP20.59■□□□□ 0.89
TPM1-214ENST00000558544 EPB41L2O43491 1005 aaKnown RBP20.59■□□□□ 0.89
TPM1-214ENST00000558544 SEC24BO95487 1268 aa20.59■□□□□ 0.89
TPM1-214ENST00000558544 HSPA4P34932 840 aa20.59■□□□□ 0.89
TPM1-214ENST00000558544 TM4SF4P48230 202 aa20.59■□□□□ 0.89
TPM1-214ENST00000558544 SH3D19Q5HYK7 790 aa20.59■□□□□ 0.89
TPM1-214ENST00000558544 REM2Q8IYK8 340 aaPredicted RBP20.59■□□□□ 0.89
TPM1-214ENST00000558544 RASEFQ8IZ41 740 aa20.59■□□□□ 0.89
TPM1-214ENST00000558544 NCOA7Q8NI08 942 aa20.59■□□□□ 0.89
TPM1-214ENST00000558544 PTPN18Q99952 460 aa20.59■□□□□ 0.89
TPM1-214ENST00000558544 ZKSCAN3Q9BRR0 538 aa20.59■□□□□ 0.89
TPM1-214ENST00000558544 PARP14Q460N5 1801 aa20.58■□□□□ 0.89
TPM1-214ENST00000558544 C19orf81C9J6K1 198 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 TTLL1O95922 423 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 NT5C2P49902 561 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 INHBEP58166 350 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 USP17L2Q6R6M4 530 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 CYB5R4Q7L1T6 521 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 IFNL1Q8IU54 200 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 KIAA1683Q9H0B3 1180 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 SH2D4AQ9H788 454 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 TMOD4Q9NZQ9 345 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 ZSWIM5Q9P217 1185 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 NYAP2Q9P242 653 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 CLIP2Q9UDT6 1046 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 STX8Q9UNK0 236 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 TMX2Q9Y320 296 aa20.58■□□□□ 0.88
TPM1-214ENST00000558544 BTBD19C9JJ37 291 aa20.57■□□□□ 0.88
TPM1-214ENST00000558544 ZKSCAN1P17029 563 aaPredicted RBP20.57■□□□□ 0.88
TPM1-214ENST00000558544 USP14P54578 494 aa20.57■□□□□ 0.88
TPM1-214ENST00000558544 FASTKD5Q7L8L6 764 aaKnown RBP20.57■□□□□ 0.88
TPM1-214ENST00000558544 FAM43AQ8N2R8 423 aa20.57■□□□□ 0.88
TPM1-214ENST00000558544 JMYQ8N9B5 988 aa20.57■□□□□ 0.88
TPM1-214ENST00000558544 PROCA1Q8NCQ7 364 aaPredicted RBP20.57■□□□□ 0.88
TPM1-214ENST00000558544 EMILIN3Q9NT22 766 aa20.57■□□□□ 0.88
TPM1-214ENST00000558544 TCP11L1Q9NUJ3 509 aa20.57■□□□□ 0.88
TPM1-214ENST00000558544 EIF5BO60841 1220 aaKnown RBP20.56■□□□□ 0.88
TPM1-214ENST00000558544 MAP2K1Q02750 393 aaPredicted RBP20.56■□□□□ 0.88
TPM1-214ENST00000558544 TREML2Q5T2D2 321 aa20.56■□□□□ 0.88
TPM1-214ENST00000558544 GPAT2Q6NUI2 795 aa20.56■□□□□ 0.88
TPM1-214ENST00000558544 IQCA1Q86XH1 822 aa20.56■□□□□ 0.88
TPM1-214ENST00000558544 MB21D2Q8IYB1 491 aaPredicted RBP20.56■□□□□ 0.88
TPM1-214ENST00000558544 LRRC47Q8N1G4 583 aaKnown RBP20.56■□□□□ 0.88
TPM1-214ENST00000558544 SNX14Q9Y5W7 946 aa20.56■□□□□ 0.88
TPM1-214ENST00000558544 RAD21O60216 631 aa20.55■□□□□ 0.88
TPM1-214ENST00000558544 MCCP23508 829 aa20.55■□□□□ 0.88
TPM1-214ENST00000558544 COL9A3Q14050 684 aaPredicted RBP20.55■□□□□ 0.88
TPM1-214ENST00000558544 ADCK5Q3MIX3 580 aa20.55■□□□□ 0.88
TPM1-214ENST00000558544 PPP4R3BQ5MIZ7 849 aa20.55■□□□□ 0.88
TPM1-214ENST00000558544 CHST3Q7LGC8 479 aa20.55■□□□□ 0.88
TPM1-214ENST00000558544 ANKRD23Q86SG2 305 aa20.55■□□□□ 0.88
TPM1-214ENST00000558544 KCNB2Q92953 911 aa20.55■□□□□ 0.88
TPM1-214ENST00000558544 C12orf42Q96LP6 360 aa20.55■□□□□ 0.88
TPM1-214ENST00000558544 VCPKMTQ9H867 229 aa20.55■□□□□ 0.88
TPM1-214ENST00000558544 TNKSO95271 1327 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms