RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ABI1Q8IZP0 508 aa5.65□□□□□ -1.5
SPG11-206ENST00000558093 ASB11Q8WXH4 323 aa5.65□□□□□ -1.5
SPG11-206ENST00000558093 NT5C1AQ9BXI3 368 aa5.65□□□□□ -1.5
SPG11-206ENST00000558093 PAK6Q9NQU5 681 aaPredicted RBP5.65□□□□□ -1.5
SPG11-206ENST00000558093 KIAA1522Q9P206 1035 aaPredicted RBP5.65□□□□□ -1.5
SPG11-206ENST00000558093 SNX11Q9Y5W9 270 aa5.65□□□□□ -1.5
SPG11-206ENST00000558093 CHURC1-FNTBB4DL54 471 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 H3BS24 57 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 ZNF865P0CJ78 1059 aaPredicted RBP5.64□□□□□ -1.51
SPG11-206ENST00000558093 GBP1P32455 592 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 CD96P40200 585 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 KIR3DL1P43629 444 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 NKPD1Q17RQ9 610 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 ARSHQ5FYA8 562 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 C22orf34Q6ZV56 151 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 ZNF654Q8IZM8 581 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 EAF1Q96JC9 268 aaPredicted RBP5.64□□□□□ -1.51
SPG11-206ENST00000558093 CCDC74BQ96LY2 380 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 TNKS2Q9H2K2 1166 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 GMIPQ9P107 970 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 CEP131Q9UPN4 1083 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 CAPN6Q9Y6Q1 641 aa5.64□□□□□ -1.51
SPG11-206ENST00000558093 CD8BP10966 210 aa5.63□□□□□ -1.51
SPG11-206ENST00000558093 HDLBPQ00341 1268 aaKnown RBP5.63□□□□□ -1.51
SPG11-206ENST00000558093 C9orf131Q5VYM1 1079 aa5.63□□□□□ -1.51
SPG11-206ENST00000558093 OVOS1Q6IE37 1185 aa5.63□□□□□ -1.51
SPG11-206ENST00000558093 SPRED2Q7Z698 418 aa5.63□□□□□ -1.51
SPG11-206ENST00000558093 NT5DC4Q86YG4 428 aa5.63□□□□□ -1.51
SPG11-206ENST00000558093 DNAJB8Q8NHS0 232 aa5.63□□□□□ -1.51
SPG11-206ENST00000558093 BAHD1Q8TBE0 780 aaPredicted RBP5.63□□□□□ -1.51
SPG11-206ENST00000558093 HSPA12BQ96MM6 686 aa5.63□□□□□ -1.51
SPG11-206ENST00000558093 FERD3LQ96RJ6 166 aa5.63□□□□□ -1.51
SPG11-206ENST00000558093 KIF2CQ99661 725 aa5.63□□□□□ -1.51
SPG11-206ENST00000558093 DDX41Q9UJV9 622 aaKnown RBP5.63□□□□□ -1.51
SPG11-206ENST00000558093 DNAJA2O60884 412 aa5.62□□□□□ -1.51
SPG11-206ENST00000558093 RBM25P49756 843 aaKnown RBP5.62□□□□□ -1.51
SPG11-206ENST00000558093 RACK1P63244 317 aaKnown RBP5.62□□□□□ -1.51
SPG11-206ENST00000558093 CLCQ05315 142 aa5.62□□□□□ -1.51
SPG11-206ENST00000558093 FBXW10Q5XX13 1052 aa5.62□□□□□ -1.51
SPG11-206ENST00000558093 NFXL1Q6ZNB6 911 aa5.62□□□□□ -1.51
SPG11-206ENST00000558093 SLITRK4Q8IW52 837 aa5.62□□□□□ -1.51
SPG11-206ENST00000558093 REXO1Q8N1G1 1221 aaKnown RBP5.62□□□□□ -1.51
SPG11-206ENST00000558093 KCNH3Q9ULD8 1083 aa5.62□□□□□ -1.51
SPG11-206ENST00000558093 PITPNM2Q9BZ72 1349 aa5.62□□□□□ -1.51
SPG11-206ENST00000558093 CNTNAP4Q9C0A0 1308 aa5.62□□□□□ -1.51
SPG11-206ENST00000558093 SLC22A31A6NKX4 558 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 ATE1O95260 518 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 FUT4P22083 530 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 ZP2Q05996 745 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 TNK2Q07912 1038 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 PAK2Q13177 524 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 LRRFIP1Q32MZ4 808 aaKnown RBP5.61□□□□□ -1.51
SPG11-206ENST00000558093 NLRC3Q7RTR2 1065 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 METTL16Q86W50 562 aaKnown RBP5.61□□□□□ -1.51
SPG11-206ENST00000558093 PIWIL2Q8TC59 973 aaKnown RBP5.61□□□□□ -1.51
SPG11-206ENST00000558093 PI4K2BQ8TCG2 481 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 PPP1R13LQ8WUF5 828 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 RNF141Q8WVD5 230 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 TMEM40Q8WWA1 233 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 KREMEN1Q96MU8 473 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 CCSER2Q9H7U1 834 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 EHMT1Q9H9B1 1298 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 ZSWIM5Q9P217 1185 aa5.61□□□□□ -1.51
SPG11-206ENST00000558093 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.61□□□□□ -1.51
SPG11-206ENST00000558093 IMPDH2P12268 514 aa5.6□□□□□ -1.51
SPG11-206ENST00000558093 RNF4P78317 190 aa5.6□□□□□ -1.51
SPG11-206ENST00000558093 ZNF792Q3KQV3 632 aa5.6□□□□□ -1.51
SPG11-206ENST00000558093 THAP5Q7Z6K1 395 aa5.6□□□□□ -1.51
SPG11-206ENST00000558093 UBE2FQ969M7 185 aa5.6□□□□□ -1.51
SPG11-206ENST00000558093 ASPNQ9BXN1 380 aa5.6□□□□□ -1.51
SPG11-206ENST00000558093 TRIT1Q9H3H1 467 aaKnown RBP5.6□□□□□ -1.51
SPG11-206ENST00000558093 RC3H2Q9HBD1 1191 aaKnown RBP5.6□□□□□ -1.51
SPG11-206ENST00000558093 ATP13A1Q9HD20 1204 aa5.6□□□□□ -1.51
SPG11-206ENST00000558093 GPATCH2Q9NW75 528 aa5.6□□□□□ -1.51
SPG11-206ENST00000558093 RGS13O14921 159 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 POLR2BP30876 1174 aaKnown RBP5.59□□□□□ -1.51
SPG11-206ENST00000558093 MCTP1Q6DN14 999 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 WFDC3Q8IUB2 231 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 DTWD2Q8NBA8 298 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 ZNF428Q96B54 188 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 GPRASP2Q96D09 838 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 ATG4CQ96DT6 458 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 SPATA32Q96LK8 384 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 Q96M66 194 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.59□□□□□ -1.51
SPG11-206ENST00000558093 ASCC2Q9H1I8 757 aaPredicted RBP5.59□□□□□ -1.51
SPG11-206ENST00000558093 ANTXR1Q9H6X2 564 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 CARS2Q9HA77 564 aaKnown RBP5.59□□□□□ -1.51
SPG11-206ENST00000558093 SEMA3GQ9NS98 782 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 ADGRE2Q9UHX3 823 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 ZNRF3Q9ULT6 936 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 ST14Q9Y5Y6 855 aa5.59□□□□□ -1.51
SPG11-206ENST00000558093 FAM86C2PA6NEL3 165 aa5.58□□□□□ -1.52
SPG11-206ENST00000558093 MEIS3P2A8K0S8 358 aa5.58□□□□□ -1.52
SPG11-206ENST00000558093 CLEC3AO75596 197 aa5.58□□□□□ -1.52
SPG11-206ENST00000558093 CLEC16AQ2KHT3 1053 aa5.58□□□□□ -1.52
SPG11-206ENST00000558093 CDCP2Q5VXM1 449 aa5.58□□□□□ -1.52
SPG11-206ENST00000558093 CRBNQ96SW2 442 aa5.58□□□□□ -1.52
SPG11-206ENST00000558093 CNNM2Q9H8M5 875 aa5.58□□□□□ -1.52
SPG11-206ENST00000558093 PRDM7Q9NQW5 492 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms