RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 FKBP1CQ5VVH2 108 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 CTU1Q7Z7A3 348 aaKnown RBP9.3□□□□□ -0.92
SPG11-205ENST00000558080 FAM83AQ86UY5 434 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 OPTNQ96CV9 577 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 FAM217BQ9NTX9 383 aaPredicted RBP9.3□□□□□ -0.92
SPG11-205ENST00000558080 USP40Q9NVE5 1235 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 MYH1P12882 1939 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 PHIPQ8WWQ0 1821 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 SALL1Q9NSC2 1324 aa9.3□□□□□ -0.92
SPG11-205ENST00000558080 DOCK3Q8IZD9 2030 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 ZSWIM8A7E2V4 1837 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 FOCADQ5VW36 1801 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 ALDH1A1P00352 501 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 NEFLP07196 543 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 INSM1Q01101 510 aaPredicted RBP9.29□□□□□ -0.92
SPG11-205ENST00000558080 NFIAQ12857 509 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 OS9Q13438 667 aaPredicted RBP9.29□□□□□ -0.92
SPG11-205ENST00000558080 VGLL4Q14135 290 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 MVPQ14764 893 aaKnown RBP9.29□□□□□ -0.92
SPG11-205ENST00000558080 MIGA2Q7L4E1 593 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 DZIP1Q86YF9 867 aaKnown RBP9.29□□□□□ -0.92
SPG11-205ENST00000558080 ZGPATQ8N5A5 531 aaKnown RBP9.29□□□□□ -0.92
SPG11-205ENST00000558080 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.29□□□□□ -0.92
SPG11-205ENST00000558080 FAM151AQ8WW52 585 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 ZKSCAN4Q969J2 545 aaPredicted RBP9.29□□□□□ -0.92
SPG11-205ENST00000558080 HOOK2Q96ED9 719 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 WRNIP1Q96S55 665 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 CSADQ9Y600 493 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 MGAMO43451 1857 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 DOCK1Q14185 1865 aa9.29□□□□□ -0.92
SPG11-205ENST00000558080 MAST2Q6P0Q8 1798 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 ZBTB7BO15156 539 aaPredicted RBP9.28□□□□□ -0.92
SPG11-205ENST00000558080 FKTNO75072 461 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 SURF6O75683 361 aaKnown RBP9.28□□□□□ -0.92
SPG11-205ENST00000558080 DCAF15Q66K64 600 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 SPTY2D1Q68D10 685 aaPredicted RBP9.28□□□□□ -0.92
SPG11-205ENST00000558080 OTUD7BQ6GQQ9 843 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 PI16Q6UXB8 463 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 TBC1D9Q6ZT07 1266 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 ERICH6Q7L0X2 663 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 RETREG3Q86VR2 466 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 ZFPM1Q8IX07 1006 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 PANK1Q8TE04 598 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 SSH3Q8TE77 659 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 PTPN18Q99952 460 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 CFHR5Q9BXR6 569 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 ZNF341Q9BYN7 854 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 HMG20BQ9P0W2 317 aa9.28□□□□□ -0.92
SPG11-205ENST00000558080 RPAP1Q9BWH6 1393 aaPredicted RBP9.27□□□□□ -0.93
SPG11-205ENST00000558080 CCL15-CCL14A0A0B4J2E2 113 aa9.27□□□□□ -0.93
SPG11-205ENST00000558080 INPP5BP32019 993 aa9.27□□□□□ -0.93
SPG11-205ENST00000558080 RGS3P49796 1198 aa9.27□□□□□ -0.93
SPG11-205ENST00000558080 MECOMQ03112 1051 aa9.27□□□□□ -0.93
SPG11-205ENST00000558080 CRHR2Q13324 411 aa9.27□□□□□ -0.93
SPG11-205ENST00000558080 CCL15Q16663 113 aa9.27□□□□□ -0.93
SPG11-205ENST00000558080 ERO1BQ86YB8 467 aa9.27□□□□□ -0.93
SPG11-205ENST00000558080 SPATA5Q8NB90 893 aa9.27□□□□□ -0.93
SPG11-205ENST00000558080 BRI3BPQ8WY22 251 aa9.27□□□□□ -0.93
SPG11-205ENST00000558080 SYMPKQ92797 1274 aaKnown RBP9.27□□□□□ -0.93
SPG11-205ENST00000558080 SNRKQ9NRH2 765 aa9.27□□□□□ -0.93
SPG11-205ENST00000558080 SNCAIPQ9Y6H5 919 aa9.27□□□□□ -0.93
SPG11-205ENST00000558080 PDS5AQ29RF7 1337 aaKnown RBP9.27□□□□□ -0.93
SPG11-205ENST00000558080 MYH7P12883 1935 aa9.27□□□□□ -0.93
SPG11-205ENST00000558080 SPDYE5A6NIY4 337 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 SIAH2O43255 324 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 UQCRFS1P1P0C7P4 283 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 ARID4AP29374 1257 aaPredicted RBP9.26□□□□□ -0.93
SPG11-205ENST00000558080 MCAMP43121 646 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 BTDP43251 543 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 GTF2A2P52657 109 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 TNNI3KQ59H18 835 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 NOM1Q5C9Z4 860 aaKnown RBP9.26□□□□□ -0.93
SPG11-205ENST00000558080 TTC39AQ5SRH9 613 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 ZSCAN29Q8IWY8 852 aaPredicted RBP9.26□□□□□ -0.93
SPG11-205ENST00000558080 ZNF384Q8TF68 577 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 NUDT12Q9BQG2 462 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 DBNDD2Q9BQY9 259 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 RAI14Q9P0K7 980 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 FPGT-TNNI3KV9GXZ4 949 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 MROH7-TTC4A0A0A0MT08 1334 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 GAKO14976 1311 aa9.26□□□□□ -0.93
SPG11-205ENST00000558080 MYH8P13535 1937 aa9.25□□□□□ -0.93
SPG11-205ENST00000558080 LDHCP07864 332 aa9.25□□□□□ -0.93
SPG11-205ENST00000558080 SLURP2P0DP57 97 aa9.25□□□□□ -0.93
SPG11-205ENST00000558080 SOX10P56693 466 aa9.25□□□□□ -0.93
SPG11-205ENST00000558080 PICALMQ13492 652 aa9.25□□□□□ -0.93
SPG11-205ENST00000558080 TAF1CQ15572 869 aaPredicted RBP9.25□□□□□ -0.93
SPG11-205ENST00000558080 PKN2Q16513 984 aaKnown RBP9.25□□□□□ -0.93
SPG11-205ENST00000558080 PTCRAQ6ISU1 281 aaPredicted RBP9.25□□□□□ -0.93
SPG11-205ENST00000558080 SH3BP5LQ7L8J4 393 aa9.25□□□□□ -0.93
SPG11-205ENST00000558080 FAM43AQ8N2R8 423 aa9.25□□□□□ -0.93
SPG11-205ENST00000558080 CD99L2Q8TCZ2 262 aa9.25□□□□□ -0.93
SPG11-205ENST00000558080 IDI2Q9BXS1 227 aa9.25□□□□□ -0.93
SPG11-205ENST00000558080 CCDC8Q9H0W5 538 aaPredicted RBP9.25□□□□□ -0.93
SPG11-205ENST00000558080 GPR108Q9NPR9 543 aa9.25□□□□□ -0.93
SPG11-205ENST00000558080 DDX4Q9NQI0 724 aaKnown RBP9.25□□□□□ -0.93
SPG11-205ENST00000558080 LRP2BPQ9P2M1 347 aa9.25□□□□□ -0.93
SPG11-205ENST00000558080 ZNF112Q9UJU3 913 aa9.25□□□□□ -0.93
SPG11-205ENST00000558080 SIPA1L1O43166 1804 aa9.25□□□□□ -0.93
SPG11-205ENST00000558080 GPR75-ASB3A0A0A6YYF3 556 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms