RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 NAGPAQ9UK23 515 aa9.07□□□□□ -0.96
ZEB1-210ENST00000557827 GPR39O43194 453 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 PRODHO43272 600 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 ZNF862O60290 1169 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 GFRA3O60609 400 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 NPTXRO95502 500 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 TP53P04637 393 aaPredicted RBP9.06□□□□□ -0.96
ZEB1-210ENST00000557827 ITGAVP06756 1048 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 FGFR1P11362 822 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 PABPC1P11940 636 aaKnown RBP9.06□□□□□ -0.96
ZEB1-210ENST00000557827 POU3F2P20265 443 aaPredicted RBP9.06□□□□□ -0.96
ZEB1-210ENST00000557827 SMCPP49901 116 aaPredicted RBP9.06□□□□□ -0.96
ZEB1-210ENST00000557827 PMS1P54277 932 aaKnown RBP9.06□□□□□ -0.96
ZEB1-210ENST00000557827 POU4F3Q15319 338 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 DHCR24Q15392 516 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 TRIM61Q5EBN2 209 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 GDF6Q6KF10 455 aaPredicted RBP9.06□□□□□ -0.96
ZEB1-210ENST00000557827 PPP4R4Q6NUP7 873 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 NSMFQ6X4W1 530 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 APBB1IPQ7Z5R6 666 aaPredicted RBP9.06□□□□□ -0.96
ZEB1-210ENST00000557827 PPFIBP1Q86W92 1011 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 C12orf40Q86WS4 652 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 TMEM192Q8IY95 271 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 LRRN4CLQ8ND94 238 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 SLC7A3Q8WY07 619 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 MPHOSPH6Q99547 160 aaKnown RBP9.06□□□□□ -0.96
ZEB1-210ENST00000557827 LPIN3Q9BQK8 851 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 TRIM39Q9HCM9 518 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 CHST12Q9NRB3 414 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 SFMBT1Q9UHJ3 866 aa9.06□□□□□ -0.96
ZEB1-210ENST00000557827 PRAMEF27A3QJZ7 478 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 EPHX1P07099 455 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 CDC25BP30305 580 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 GRIA2P42262 883 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 NEK4P51957 841 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 STAT4Q14765 748 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 ZNF468Q5VIY5 522 aaPredicted RBP9.05□□□□□ -0.96
ZEB1-210ENST00000557827 PKN3Q6P5Z2 889 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 PASD1Q8IV76 773 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 SLC7A14Q8TBB6 771 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 OSBP2Q969R2 916 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 HOOK2Q96ED9 719 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 ZNF837Q96EG3 531 aaPredicted RBP9.05□□□□□ -0.96
ZEB1-210ENST00000557827 SLC6A18Q96N87 628 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 NRSN2Q9GZP1 204 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 MTFR1LQ9H019 292 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 CDH19Q9H159 772 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 AASDHPPTQ9NRN7 309 aa9.05□□□□□ -0.96
ZEB1-210ENST00000557827 SUCOQ9UBS9 1254 aaKnown RBP9.05□□□□□ -0.96
ZEB1-210ENST00000557827 NRG2O14511 850 aaPredicted RBP9.04□□□□□ -0.96
ZEB1-210ENST00000557827 CAPNS1P04632 268 aa9.04□□□□□ -0.96
ZEB1-210ENST00000557827 LIG1P18858 919 aa9.04□□□□□ -0.96
ZEB1-210ENST00000557827 MAOBP27338 520 aa9.04□□□□□ -0.96
ZEB1-210ENST00000557827 PIN1Q13526 163 aaPredicted RBP9.04□□□□□ -0.96
ZEB1-210ENST00000557827 HEATR6Q6AI08 1181 aaKnown RBP9.04□□□□□ -0.96
ZEB1-210ENST00000557827 Q6ZNB5 142 aa9.04□□□□□ -0.96
ZEB1-210ENST00000557827 SAMD3Q8N6K7 520 aa9.04□□□□□ -0.96
ZEB1-210ENST00000557827 TNFRSF25Q93038 417 aa9.04□□□□□ -0.96
ZEB1-210ENST00000557827 PPP1R14AQ96A00 147 aa9.04□□□□□ -0.96
ZEB1-210ENST00000557827 WDR89Q96FK6 387 aaPredicted RBP9.04□□□□□ -0.96
ZEB1-210ENST00000557827 YIPF4Q9BSR8 244 aa9.04□□□□□ -0.96
ZEB1-210ENST00000557827 TRIM8Q9BZR9 551 aa9.04□□□□□ -0.96
ZEB1-210ENST00000557827 FRRS1LQ9P0K9 344 aa9.04□□□□□ -0.96
ZEB1-210ENST00000557827 TNPO3Q9Y5L0 923 aaKnown RBP9.04□□□□□ -0.96
ZEB1-210ENST00000557827 CSADQ9Y600 493 aa9.04□□□□□ -0.96
ZEB1-210ENST00000557827 E2F8A0AVK6 867 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 SOBPA7XYQ1 873 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 BRINP1O60477 761 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 LDHAP00338 332 aaKnown RBP9.03□□□□□ -0.96
ZEB1-210ENST00000557827 ARL4DP49703 201 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 PCBP4P57723 403 aaKnown RBP9.03□□□□□ -0.96
ZEB1-210ENST00000557827 C19orf57Q0VDD7 668 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 TDRD10Q5VZ19 366 aaKnown RBP9.03□□□□□ -0.96
ZEB1-210ENST00000557827 BRAPQ7Z569 592 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 ZNF227Q86WZ6 799 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 TICAM2Q86XR7 235 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 CACTIN-AS1Q8N1I8 211 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 CCDC155Q8N6L0 562 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 FAM13CQ8NE31 585 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 TTC9Q92623 222 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 HAUS7Q99871 368 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 LGR4Q9BXB1 951 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 RTFDC1Q9BY42 306 aaPredicted RBP9.03□□□□□ -0.96
ZEB1-210ENST00000557827 PUS7LQ9H0K6 701 aaKnown RBP9.03□□□□□ -0.96
ZEB1-210ENST00000557827 LRRC4BQ9NT99 713 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 APEX2Q9UBZ4 518 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 PDZRN3Q9UPQ7 1066 aa9.03□□□□□ -0.96
ZEB1-210ENST00000557827 C9IYK1 514 aa9.02□□□□□ -0.97
ZEB1-210ENST00000557827 RGS13O14921 159 aa9.02□□□□□ -0.97
ZEB1-210ENST00000557827 CTSBP07858 339 aa9.02□□□□□ -0.97
ZEB1-210ENST00000557827 C6orf222P0C671 652 aaPredicted RBP9.02□□□□□ -0.97
ZEB1-210ENST00000557827 ETF1P62495 437 aaKnown RBP9.02□□□□□ -0.97
ZEB1-210ENST00000557827 PDE3AQ14432 1141 aa9.02□□□□□ -0.97
ZEB1-210ENST00000557827 SEPT7Q16181 437 aaKnown RBP9.02□□□□□ -0.97
ZEB1-210ENST00000557827 KIF4BQ2VIQ3 1234 aa9.02□□□□□ -0.97
ZEB1-210ENST00000557827 C4orf46Q504U0 113 aa9.02□□□□□ -0.97
ZEB1-210ENST00000557827 FOXR1Q6PIV2 292 aa9.02□□□□□ -0.97
ZEB1-210ENST00000557827 ZBTB46Q86UZ6 589 aa9.02□□□□□ -0.97
ZEB1-210ENST00000557827 MCATQ8IVS2 390 aaKnown RBP9.02□□□□□ -0.97
ZEB1-210ENST00000557827 SLFN12Q8IYM2 578 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms