RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 GK5Q6ZS86 529 aa6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 SNX27Q96L92 541 aa6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 BRMS1Q9HCU9 246 aa6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 TMEM39AQ9NV64 488 aa6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 MAPK8IP1Q9UQF2 711 aa6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 PRKAB1Q9Y478 270 aa6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 GLI3P10071 1580 aa6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 PARD3Q8TEW0 1356 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 ELOA3CA0A087WX78 387 aaPredicted RBP6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 FAM221AA4D161 298 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 ELOA3DA6NLF2 546 aaPredicted RBP6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 APBA3O96018 575 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 HOXD8P13378 290 aaPredicted RBP6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 ELOA3BQ3SY89 546 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 RASIP1Q5U651 963 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 GGT6Q6P531 493 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 CCDC84Q86UT8 332 aaPredicted RBP6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 CD163Q86VB7 1156 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 ELOA3Q8NG57 546 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 OR6P1Q8NGX9 317 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 GCC1Q96CN9 775 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 PDGFDQ9GZP0 370 aaPredicted RBP6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 TNKS2Q9H2K2 1166 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 RASSF4Q9H2L5 321 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 SAMM50Q9Y512 469 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 PKD1L2Q7Z442 2459 aa6.75□□□□□ -1.33
MTHFD1-216ENST00000557539 C1QTNF9BB2RNN3 333 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 J3QW42 95 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 GRIN3BO60391 1043 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 SIN3BO75182 1162 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 BPNT1O95861 308 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 CHRNA4P43681 627 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 GYS2P54840 703 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 ATP11AP98196 1134 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 CLCQ05315 142 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 PPP2R3AQ06190 1150 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 RASGRF1Q13972 1273 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 PPP2R5EQ16537 467 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 FXNQ16595 210 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 HABP4Q5JVS0 413 aaKnown RBP6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 DIEXFQ68CQ4 756 aaKnown RBP6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 HFE2Q6ZVN8 426 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 PBX4Q9BYU1 374 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 MUC3BQ9H195 1237 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 PTCH1Q13635 1447 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 UNC79Q9P2D8 2635 aa6.74□□□□□ -1.33
MTHFD1-216ENST00000557539 LOC102724428A0A0B4J2F2 783 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 ADARB2-AS1A8MUL3 147 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 CILPO75339 1184 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 ATF3P18847 181 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 BMP6P22004 513 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 NRLP54845 237 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 SIK1P57059 783 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 COL9A3Q14050 684 aaPredicted RBP6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 MTERF2Q49AM1 385 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 ARSHQ5FYA8 562 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 REC114Q7Z4M0 266 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 TNFRSF25Q93038 417 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 EFCC1Q9HA90 598 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 CBX8Q9HC52 389 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 TMEM260Q9NX78 707 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 ZNRF3Q9ULT6 936 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 LEMD3Q9Y2U8 911 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 STARD13Q9Y3M8 1113 aa6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 KDM5AP29375 1690 aaKnown RBP6.73□□□□□ -1.33
MTHFD1-216ENST00000557539 ADCY9O60503 1353 aa6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 DHX57Q6P158 1386 aaKnown RBP6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 PIK3R2O00459 728 aa6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 IMPDH2P12268 514 aa6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 NME2P22392 152 aa6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 LTKP29376 864 aa6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 SQSTM1Q13501 440 aa6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 TAF7LQ5H9L4 462 aa6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 KIAA0907Q7Z7F0 614 aaPredicted RBP6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 LSRQ86X29 649 aaPredicted RBP6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 RPUSD2Q8IZ73 545 aaKnown RBP6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 FAM9AQ8IZU1 332 aaPredicted RBP6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 REXO1Q8N1G1 1221 aaKnown RBP6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 PLVAPQ9BX97 442 aa6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 CLEC4MQ9H2X3 399 aaPredicted RBP6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 IGFLR1Q9H665 355 aa6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 PFDN2Q9UHV9 154 aa6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 CYP8B1Q9UNU6 501 aa6.72□□□□□ -1.33
MTHFD1-216ENST00000557539 MAST1Q9Y2H9 1570 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 DDAH1O94760 285 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 GJB6O95452 261 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 GHRHP01286 108 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 FURINP09958 794 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 CTCFP49711 727 aaPredicted RBP6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 AMPD3Q01432 767 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 TBC1D8BQ0IIM8 1120 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 LRRC14Q15048 493 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 C2orf27AQ580R0 203 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 EFCAB2Q5VUJ9 269 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 LLGL2Q6P1M3 1020 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 C8orf86Q6ZUL3 223 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 C16orf86Q6ZW13 317 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 UNC5CLQ8IV45 518 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 SULF2Q8IWU5 870 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 GRIN3AQ8TCU5 1115 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms