RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 RASA3Q14644 834 aa16.9■□□□□ 0.3
ARHGEF40-208ENST00000557498 CERKLQ49MI3 558 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF40-208ENST00000557498 APOBEC3FQ8IUX4 373 aaKnown RBP16.9■□□□□ 0.3
ARHGEF40-208ENST00000557498 CEP95Q96GE4 821 aa16.9■□□□□ 0.3
ARHGEF40-208ENST00000557498 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.9■□□□□ 0.3
ARHGEF40-208ENST00000557498 CCDC196A0A1B0GTZ2 297 aa16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 TBC1D12O60347 775 aa16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 PDCP20941 246 aa16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 ADD1P35611 737 aaKnown RBP16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 TROAPQ12815 778 aa16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 PPP2R5BQ15173 497 aa16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 PPP4R3BQ5MIZ7 849 aa16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 DPY19L2Q6NUT2 758 aa16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 CDAN1Q8IWY9 1227 aa16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 FANCBQ8NB91 859 aa16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 DDX11Q96FC9 970 aa16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 TMEM47Q9BQJ4 181 aa16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 ADARB2Q9NS39 739 aaKnown RBP16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 RBM28Q9NW13 759 aaKnown RBP16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 STX8Q9UNK0 236 aa16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 KIF3AQ9Y496 699 aa16.89■□□□□ 0.29
ARHGEF40-208ENST00000557498 MPHOSPH10O00566 681 aaKnown RBP16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 BRD1O95696 1058 aa16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 TOP1P11387 765 aaKnown RBP16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 PDIA4P13667 645 aaKnown RBP16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 SYT1P21579 422 aa16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 NTRK3Q16288 839 aa16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 ANGEL2Q5VTE6 544 aaKnown RBP16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 FAM184AQ8NB25 1140 aa16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 PNMA1Q8ND90 353 aa16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 L3MBTL3Q96JM7 780 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 MTMR4Q9NYA4 1195 aa16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 ZDHHC9Q9Y397 364 aa16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 WDR33Q9C0J8 1336 aaKnown RBP16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 STK36Q9NRP7 1315 aa16.88■□□□□ 0.29
ARHGEF40-208ENST00000557498 STX6O43752 255 aa16.87■□□□□ 0.29
ARHGEF40-208ENST00000557498 HIRAP54198 1017 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF40-208ENST00000557498 ABCB5Q2M3G0 1257 aa16.87■□□□□ 0.29
ARHGEF40-208ENST00000557498 TMEM179Q6ZVK1 233 aa16.87■□□□□ 0.29
ARHGEF40-208ENST00000557498 CTCFLQ8NI51 663 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF40-208ENST00000557498 TEPSINQ96N21 525 aa16.87■□□□□ 0.29
ARHGEF40-208ENST00000557498 MAP3K14Q99558 947 aa16.87■□□□□ 0.29
ARHGEF40-208ENST00000557498 GGA3Q9NZ52 723 aa16.87■□□□□ 0.29
ARHGEF40-208ENST00000557498 SCAF8Q9UPN6 1271 aaKnown RBP16.87■□□□□ 0.29
ARHGEF40-208ENST00000557498 MYH4Q9Y623 1939 aa16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 GDF11O95390 407 aa16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 TTLL1O95922 423 aa16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 FDPSP14324 419 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 IFNAR1P17181 557 aa16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 MAP3K10Q02779 954 aa16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 GRM4Q14833 912 aa16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 LARP1BQ659C4 914 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 TNPO1Q92973 898 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 DEFB129Q9H1M3 183 aa16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 ORC3Q9UBD5 711 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 MTMR6Q9Y217 621 aa16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 PPP2R3BQ9Y5P8 575 aa16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 PITPNM2Q9BZ72 1349 aa16.86■□□□□ 0.29
ARHGEF40-208ENST00000557498 SCN4AP35499 1836 aa16.85■□□□□ 0.29
ARHGEF40-208ENST00000557498 GLTPD2A6NH11 291 aa16.85■□□□□ 0.29
ARHGEF40-208ENST00000557498 PPFIA3O75145 1194 aa16.85■□□□□ 0.29
ARHGEF40-208ENST00000557498 KIF5BP33176 963 aa16.85■□□□□ 0.29
ARHGEF40-208ENST00000557498 RRP1BQ14684 758 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-208ENST00000557498 SHROOM1Q2M3G4 852 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF40-208ENST00000557498 TMTC3Q6ZXV5 915 aa16.85■□□□□ 0.29
ARHGEF40-208ENST00000557498 CLEC10AQ8IUN9 316 aa16.85■□□□□ 0.29
ARHGEF40-208ENST00000557498 KANSL2Q9H9L4 492 aa16.85■□□□□ 0.29
ARHGEF40-208ENST00000557498 WDR90Q96KV7 1748 aa16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 FMNL1O95466 1100 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 GH2P01242 217 aa16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 ZSCAN22P10073 491 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 GUCY1A2P33402 732 aa16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 SSRP1Q08945 709 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 SEPT2Q15019 361 aa16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 NBPF11Q86T75 865 aa16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 LRRC47Q8N1G4 583 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 PHKBQ93100 1093 aa16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 SLC26A6Q9BXS9 759 aa16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 CABP5Q9NP86 173 aa16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 CLIP2Q9UDT6 1046 aa16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 ATAD5Q96QE3 1844 aa16.84■□□□□ 0.29
ARHGEF40-208ENST00000557498 VPS37CA5D8V6 355 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF40-208ENST00000557498 PLEKHA8P1O95397 391 aa16.83■□□□□ 0.28
ARHGEF40-208ENST00000557498 JAG1P78504 1218 aa16.83■□□□□ 0.28
ARHGEF40-208ENST00000557498 ICA1Q05084 483 aa16.83■□□□□ 0.28
ARHGEF40-208ENST00000557498 FOXD4L5Q5VV16 416 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF40-208ENST00000557498 MIGA2Q7L4E1 593 aa16.83■□□□□ 0.28
ARHGEF40-208ENST00000557498 TRIM22Q8IYM9 498 aa16.83■□□□□ 0.28
ARHGEF40-208ENST00000557498 FOXD4L4Q8WXT5 416 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF40-208ENST00000557498 RNF26Q9BY78 433 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF40-208ENST00000557498 NYAP2Q9P242 653 aa16.83■□□□□ 0.28
ARHGEF40-208ENST00000557498 ZBTB21Q9ULJ3 1066 aa16.83■□□□□ 0.28
ARHGEF40-208ENST00000557498 MYH6P13533 1939 aa16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 CNTNAP5Q8WYK1 1306 aa16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 F13A1P00488 732 aa16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 EEF2P13639 858 aaKnown RBP16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 EPHX2P34913 555 aa16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 GNAQP50148 359 aa16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 FUT2Q10981 343 aa16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 NBPF12Q5TAG4 269 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms