RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 FBXO27Q8NI29 283 aa8.08□□□□□ -1.12
LINC00648-203ENST00000556923 GIPC2Q8TF65 315 aa8.08□□□□□ -1.12
LINC00648-203ENST00000556923 CYB5D2Q8WUJ1 264 aa8.08□□□□□ -1.12
LINC00648-203ENST00000556923 UBE2FQ969M7 185 aa8.08□□□□□ -1.12
LINC00648-203ENST00000556923 COPRSQ9NQ92 184 aa8.08□□□□□ -1.12
LINC00648-203ENST00000556923 KBTBD4Q9NVX7 518 aa8.08□□□□□ -1.12
LINC00648-203ENST00000556923 ZSWIM5Q9P217 1185 aa8.08□□□□□ -1.12
LINC00648-203ENST00000556923 CTNND2Q9UQB3 1225 aa8.08□□□□□ -1.12
LINC00648-203ENST00000556923 GRIN3BO60391 1043 aa8.07□□□□□ -1.12
LINC00648-203ENST00000556923 YBX3P16989 372 aaKnown RBP eCLIP8.07□□□□□ -1.12
LINC00648-203ENST00000556923 PIWIL2Q8TC59 973 aaKnown RBP8.07□□□□□ -1.12
LINC00648-203ENST00000556923 REV1Q9UBZ9 1251 aa8.07□□□□□ -1.12
LINC00648-203ENST00000556923 HTR3BO95264 441 aa8.06□□□□□ -1.12
LINC00648-203ENST00000556923 YARSP54577 528 aaKnown RBP8.06□□□□□ -1.12
LINC00648-203ENST00000556923 MPP2Q14168 576 aa8.06□□□□□ -1.12
LINC00648-203ENST00000556923 MRPL58Q14197 206 aaKnown RBP8.06□□□□□ -1.12
LINC00648-203ENST00000556923 REC114Q7Z4M0 266 aa8.06□□□□□ -1.12
LINC00648-203ENST00000556923 SLFN12Q8IYM2 578 aa8.06□□□□□ -1.12
LINC00648-203ENST00000556923 C19orf73Q9NVV2 129 aa8.06□□□□□ -1.12
LINC00648-203ENST00000556923 DNAJA2O60884 412 aa8.05□□□□□ -1.12
LINC00648-203ENST00000556923 FAM196AQ6ZSG2 479 aa8.05□□□□□ -1.12
LINC00648-203ENST00000556923 KLHL3Q9UH77 587 aa8.05□□□□□ -1.12
LINC00648-203ENST00000556923 WASH4PA8MWX3 477 aa8.04□□□□□ -1.12
LINC00648-203ENST00000556923 CHURC1-FNTBB4DL54 471 aa8.04□□□□□ -1.12
LINC00648-203ENST00000556923 ZNF326Q5BKZ1 582 aaKnown RBP8.04□□□□□ -1.12
LINC00648-203ENST00000556923 FYB2Q5VWT5 728 aa8.04□□□□□ -1.12
LINC00648-203ENST00000556923 FBXL19Q6PCT2 694 aa8.04□□□□□ -1.12
LINC00648-203ENST00000556923 ZSWIM9Q86XI8 627 aa8.04□□□□□ -1.12
LINC00648-203ENST00000556923 TMEM40Q8WWA1 233 aa8.04□□□□□ -1.12
LINC00648-203ENST00000556923 DUSP15Q9H1R2 295 aaPredicted RBP8.04□□□□□ -1.12
LINC00648-203ENST00000556923 KCNQ5Q9NR82 932 aa8.04□□□□□ -1.12
LINC00648-203ENST00000556923 TLR3O15455 904 aaKnown RBP8.03□□□□□ -1.12
LINC00648-203ENST00000556923 ESR1P03372 595 aa8.03□□□□□ -1.12
LINC00648-203ENST00000556923 C8AP07357 584 aa8.03□□□□□ -1.12
LINC00648-203ENST00000556923 EIF4A3P38919 411 aaKnown RBP8.02□□□□□ -1.13
LINC00648-203ENST00000556923 GDNFP39905 211 aa8.02□□□□□ -1.13
LINC00648-203ENST00000556923 KCNMB1Q16558 191 aa8.02□□□□□ -1.13
LINC00648-203ENST00000556923 ZNF648Q5T619 568 aaPredicted RBP8.02□□□□□ -1.13
LINC00648-203ENST00000556923 TMPRSS7Q7RTY8 843 aa8.02□□□□□ -1.13
LINC00648-203ENST00000556923 DTWD2Q8NBA8 298 aa8.02□□□□□ -1.13
LINC00648-203ENST00000556923 BAHD1Q8TBE0 780 aaPredicted RBP8.02□□□□□ -1.13
LINC00648-203ENST00000556923 RNF141Q8WVD5 230 aa8.02□□□□□ -1.13
LINC00648-203ENST00000556923 ALPK1Q96QP1 1244 aa8.02□□□□□ -1.13
LINC00648-203ENST00000556923 LRRC3Q9BY71 257 aa8.02□□□□□ -1.13
LINC00648-203ENST00000556923 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.02□□□□□ -1.13
LINC00648-203ENST00000556923 ZNF503-AS2A6NEH8 195 aa8.01□□□□□ -1.13
LINC00648-203ENST00000556923 GREM1O60565 184 aa8.01□□□□□ -1.13
LINC00648-203ENST00000556923 SRFP11831 508 aa8.01□□□□□ -1.13
LINC00648-203ENST00000556923 AFMP43652 599 aa8.01□□□□□ -1.13
LINC00648-203ENST00000556923 GAB4Q2WGN9 574 aa8.01□□□□□ -1.13
LINC00648-203ENST00000556923 GPR62Q9BZJ7 368 aa8.01□□□□□ -1.13
LINC00648-203ENST00000556923 SLAMF8Q9P0V8 285 aa8.01□□□□□ -1.13
LINC00648-203ENST00000556923 SUPT16HQ9Y5B9 1047 aaKnown RBP8.01□□□□□ -1.13
LINC00648-203ENST00000556923 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8□□□□□ -1.13
LINC00648-203ENST00000556923 LRRN2O75325 713 aa8□□□□□ -1.13
LINC00648-203ENST00000556923 TPP2P29144 1249 aaPredicted RBP8□□□□□ -1.13
LINC00648-203ENST00000556923 TNNI2P48788 182 aa8□□□□□ -1.13
LINC00648-203ENST00000556923 CWF19L2Q2TBE0 894 aaKnown RBP8□□□□□ -1.13
LINC00648-203ENST00000556923 HS2ST1Q7LGA3 356 aa8□□□□□ -1.13
LINC00648-203ENST00000556923 CCDC74BQ96LY2 380 aa8□□□□□ -1.13
LINC00648-203ENST00000556923 KREMEN1Q96MU8 473 aa8□□□□□ -1.13
LINC00648-203ENST00000556923 KRTAP9-9Q9BYP9 154 aa8□□□□□ -1.13
LINC00648-203ENST00000556923 KRTAP9-4Q9BYQ2 154 aa8□□□□□ -1.13
LINC00648-203ENST00000556923 BRMS1Q9HCU9 246 aa8□□□□□ -1.13
LINC00648-203ENST00000556923 GGT7Q9UJ14 662 aa8□□□□□ -1.13
LINC00648-203ENST00000556923 ROBO2Q9HCK4 1378 aa7.99□□□□□ -1.13
LINC00648-203ENST00000556923 DNAJC25-GNG10A0A024R161 153 aa7.99□□□□□ -1.13
LINC00648-203ENST00000556923 CRKP46108 304 aa7.99□□□□□ -1.13
LINC00648-203ENST00000556923 RALGPS1Q5JS13 557 aa7.99□□□□□ -1.13
LINC00648-203ENST00000556923 LDLRAD1Q5T700 205 aa7.99□□□□□ -1.13
LINC00648-203ENST00000556923 CREG2Q8IUH2 290 aa7.99□□□□□ -1.13
LINC00648-203ENST00000556923 PHACTR4Q8IZ21 702 aa7.99□□□□□ -1.13
LINC00648-203ENST00000556923 ZNF296Q8WUU4 475 aaPredicted RBP7.99□□□□□ -1.13
LINC00648-203ENST00000556923 KIRREL1Q96J84 757 aa7.99□□□□□ -1.13
LINC00648-203ENST00000556923 KIF2CQ99661 725 aa7.99□□□□□ -1.13
LINC00648-203ENST00000556923 TRIT1Q9H3H1 467 aaKnown RBP7.99□□□□□ -1.13
LINC00648-203ENST00000556923 ADAMTS1Q9UHI8 967 aa7.99□□□□□ -1.13
LINC00648-203ENST00000556923 KCNH3Q9ULD8 1083 aa7.99□□□□□ -1.13
LINC00648-203ENST00000556923 PCDHB14Q9Y5E9 798 aa7.99□□□□□ -1.13
LINC00648-203ENST00000556923 ZNF16P17020 682 aaPredicted RBP7.98□□□□□ -1.13
LINC00648-203ENST00000556923 TMCO4Q5TGY1 634 aa7.98□□□□□ -1.13
LINC00648-203ENST00000556923 TSPYL5Q86VY4 417 aaPredicted RBP7.98□□□□□ -1.13
LINC00648-203ENST00000556923 LIN37Q96GY3 246 aaPredicted RBP7.98□□□□□ -1.13
LINC00648-203ENST00000556923 GPATCH2Q9NW75 528 aa7.98□□□□□ -1.13
LINC00648-203ENST00000556923 LRRC10BA6NIK2 292 aa7.97□□□□□ -1.13
LINC00648-203ENST00000556923 SLC22A31A6NKX4 558 aa7.97□□□□□ -1.13
LINC00648-203ENST00000556923 FARP2O94887 1054 aaPredicted RBP7.97□□□□□ -1.13
LINC00648-203ENST00000556923 GLI1P08151 1106 aa7.97□□□□□ -1.13
LINC00648-203ENST00000556923 TTC6Q86TZ1 520 aa7.97□□□□□ -1.13
LINC00648-203ENST00000556923 CCDC120Q96HB5 630 aa7.97□□□□□ -1.13
LINC00648-203ENST00000556923 ASPNQ9BXN1 380 aa7.97□□□□□ -1.13
LINC00648-203ENST00000556923 DUSP13Q9UII6 198 aa7.97□□□□□ -1.13
LINC00648-203ENST00000556923 TMEM59LQ9UK28 342 aa7.97□□□□□ -1.13
LINC00648-203ENST00000556923 BTBD11A6QL63 1104 aa7.96□□□□□ -1.14
LINC00648-203ENST00000556923 ATE1O95260 518 aa7.96□□□□□ -1.14
LINC00648-203ENST00000556923 MESP2Q0VG99 397 aa7.96□□□□□ -1.14
LINC00648-203ENST00000556923 MLANAQ16655 118 aa7.96□□□□□ -1.14
LINC00648-203ENST00000556923 ARSHQ5FYA8 562 aa7.96□□□□□ -1.14
LINC00648-203ENST00000556923 VWCEQ96DN2 955 aa7.96□□□□□ -1.14
LINC00648-203ENST00000556923 UBP1Q9NZI7 540 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms