RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 TLR7Q9NYK1 1049 aaKnown RBP6.53□□□□□ -1.36
ATXN3-244ENST00000556898 HDAC5Q9UQL6 1122 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 TAF1P21675 1872 aa6.53□□□□□ -1.36
ATXN3-244ENST00000556898 ZNF541Q9H0D2 1346 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 TRAK2O60296 914 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 LMOD1P29536 600 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-244ENST00000556898 ADORA1P30542 326 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 IARSP41252 1262 aaKnown RBP6.52□□□□□ -1.37
ATXN3-244ENST00000556898 EIF6P56537 245 aaKnown RBP6.52□□□□□ -1.37
ATXN3-244ENST00000556898 GRM1Q13255 1194 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 CRY2Q49AN0 593 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 CC2D2BQ6DHV5 1058 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 CYP4F22Q6NT55 531 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 LDHAL6AQ6ZMR3 332 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 DDX46Q7L014 1031 aaKnown RBP6.52□□□□□ -1.37
ATXN3-244ENST00000556898 RPGRQ92834 1020 aaKnown RBP6.52□□□□□ -1.37
ATXN3-244ENST00000556898 EAF2Q96CJ1 260 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-244ENST00000556898 SPOCK3Q9BQ16 436 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 LRRCC1Q9C099 1032 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 ENAMQ9NRM1 1142 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 CNNM1Q9NRU3 951 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 RIPOR2Q9Y4F9 1068 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 COL11A2P13942 1736 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-244ENST00000556898 RTL9Q8NET4 1388 aa6.52□□□□□ -1.37
ATXN3-244ENST00000556898 SBF1O95248 1867 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 POM121CA8CG34 1229 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 RAB11FIP3O75154 756 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 KLRK1P26718 216 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 IGHMBP2P38935 993 aaKnown RBP6.51□□□□□ -1.37
ATXN3-244ENST00000556898 IL15P40933 162 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-244ENST00000556898 TIMM10P62072 90 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 RPS8P62241 208 aaKnown RBP6.51□□□□□ -1.37
ATXN3-244ENST00000556898 CHRNDQ07001 517 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 DGKZQ13574 1117 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 GRAPQ13588 217 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 METTL24Q5JXM2 366 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 CST9Q5W186 159 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 USP50Q70EL3 339 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-244ENST00000556898 AACSQ86V21 672 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 ANKRD18AQ8IVF6 992 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 BEND7Q8N7W2 519 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-244ENST00000556898 NEDD1Q8NHV4 660 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 GRAPLQ8TC17 118 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-244ENST00000556898 KIF1BPQ96EK5 621 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 RBM17Q96I25 401 aaKnown RBP6.51□□□□□ -1.37
ATXN3-244ENST00000556898 MPHOSPH8Q99549 860 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 DBNDD2Q9BQY9 259 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 OSBPL3Q9H4L5 887 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 MINPP1Q9UNW1 487 aa6.51□□□□□ -1.37
ATXN3-244ENST00000556898 SALL3Q9BXA9 1300 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 SPEF2Q9C093 1822 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 MSTNO14793 375 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 AOC2O75106 756 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 CIAO1O76071 339 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 MAP4K4O95819 1239 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-244ENST00000556898 PROCP04070 461 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 HOXA10P31260 410 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-244ENST00000556898 SNRPNP63162 240 aaKnown RBP6.5□□□□□ -1.37
ATXN3-244ENST00000556898 GPSM2P81274 684 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 CLN3Q13286 438 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 TNNI3KQ59H18 835 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 FOXR1Q6PIV2 292 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 PLEKHM2Q8IWE5 1019 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 VGLL2Q8N8G2 317 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 ADAMTS19Q8TE59 1207 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 HHIPL1Q96JK4 782 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 NEUROD6Q96NK8 337 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 CDC5LQ99459 802 aaKnown RBP6.5□□□□□ -1.37
ATXN3-244ENST00000556898 PSMD1Q99460 953 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 ALG2Q9H553 416 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 DBNLQ9UJU6 430 aaKnown RBP6.5□□□□□ -1.37
ATXN3-244ENST00000556898 GJA3Q9Y6H8 435 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 FPGT-TNNI3KV9GXZ4 949 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 MYH3P11055 1940 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 ZNF609O15014 1411 aa6.5□□□□□ -1.37
ATXN3-244ENST00000556898 A0A1B0GUL7 405 aa6.49□□□□□ -1.37
ATXN3-244ENST00000556898 PHF20L1A8MW92 1017 aa6.49□□□□□ -1.37
ATXN3-244ENST00000556898 SPATA31C2B4DYI2 1134 aa6.49□□□□□ -1.37
ATXN3-244ENST00000556898 TRAF5O00463 557 aa6.49□□□□□ -1.37
ATXN3-244ENST00000556898 ADAM23O75077 832 aa6.49□□□□□ -1.37
ATXN3-244ENST00000556898 HSP90B1P14625 803 aaKnown RBP6.49□□□□□ -1.37
ATXN3-244ENST00000556898 GSPT1P15170 499 aaKnown RBP6.49□□□□□ -1.37
ATXN3-244ENST00000556898 EPS15P42566 896 aa6.49□□□□□ -1.37
ATXN3-244ENST00000556898 FMR1Q06787 632 aaKnown RBP eCLIP6.49□□□□□ -1.37
ATXN3-244ENST00000556898 HSP90AB4PQ58FF6 505 aa6.49□□□□□ -1.37
ATXN3-244ENST00000556898 C1orf229Q6ZS94 237 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-244ENST00000556898 SAPCD2Q86UD0 394 aa6.49□□□□□ -1.37
ATXN3-244ENST00000556898 ERC1Q8IUD2 1116 aa6.49□□□□□ -1.37
ATXN3-244ENST00000556898 CRAMP1Q96RY5 1269 aa6.49□□□□□ -1.37
ATXN3-244ENST00000556898 ARHGEF10LQ9HCE6 1279 aa6.49□□□□□ -1.37
ATXN3-244ENST00000556898 BSDC1Q9NW68 430 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-244ENST00000556898 CEP126Q9P2H0 1117 aa6.49□□□□□ -1.37
ATXN3-244ENST00000556898 OIP5O43482 229 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 PDE8BO95263 885 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 CELF2O95319 508 aaKnown RBP6.48□□□□□ -1.37
ATXN3-244ENST00000556898 IFIT2P09913 472 aaKnown RBP6.48□□□□□ -1.37
ATXN3-244ENST00000556898 MX2P20592 715 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 FGFR2P21802 821 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 SCNN1DP51172 638 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 PDE1AP54750 535 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms