RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 PATL2C9JE40 543 aaKnown RBP26.88■■□□□ 1.89
PABPN1-206ENST00000556809 CTGFP29279 349 aa26.88■■□□□ 1.89
PABPN1-206ENST00000556809 CDK8P49336 464 aa26.88■■□□□ 1.89
PABPN1-206ENST00000556809 RAB3GAP1Q15042 981 aa26.88■■□□□ 1.89
PABPN1-206ENST00000556809 ARHGAP39Q9C0H5 1083 aa26.88■■□□□ 1.89
PABPN1-206ENST00000556809 PTPN22Q9Y2R2 807 aa26.88■■□□□ 1.89
PABPN1-206ENST00000556809 HOXA7P31268 230 aaPredicted RBP26.87■■□□□ 1.89
PABPN1-206ENST00000556809 SEPT2Q15019 361 aa26.87■■□□□ 1.89
PABPN1-206ENST00000556809 CCDC85CA6NKD9 419 aa26.86■■□□□ 1.89
PABPN1-206ENST00000556809 MGAMO43451 1857 aa26.86■■□□□ 1.89
PABPN1-206ENST00000556809 PABPC4Q13310 644 aaKnown RBP eCLIP26.86■■□□□ 1.893e-6■■□□□ 13.4
PABPN1-206ENST00000556809 BMP2KLQ5H9B9 411 aa26.86■■□□□ 1.89
PABPN1-206ENST00000556809 CWC27Q6UX04 472 aaKnown RBP26.86■■□□□ 1.89
PABPN1-206ENST00000556809 IFNL3Q8IZI9 196 aa26.86■■□□□ 1.89
PABPN1-206ENST00000556809 ACER1Q8TDN7 264 aa26.86■■□□□ 1.89
PABPN1-206ENST00000556809 C12orf42Q96LP6 360 aa26.86■■□□□ 1.89
PABPN1-206ENST00000556809 TMOD4Q9NZQ9 345 aa26.86■■□□□ 1.89
PABPN1-206ENST00000556809 PNMA3Q9UL41 463 aa26.86■■□□□ 1.89
PABPN1-206ENST00000556809 ROBO3Q96MS0 1386 aa26.85■■□□□ 1.89
PABPN1-206ENST00000556809 AKR1B1P15121 316 aa26.85■■□□□ 1.89
PABPN1-206ENST00000556809 ARHGEF6Q15052 776 aa26.85■■□□□ 1.89
PABPN1-206ENST00000556809 USP17L2Q6R6M4 530 aa26.85■■□□□ 1.89
PABPN1-206ENST00000556809 KIAA1683Q9H0B3 1180 aa26.85■■□□□ 1.89
PABPN1-206ENST00000556809 ASCC2Q9H1I8 757 aaPredicted RBP26.85■■□□□ 1.89
PABPN1-206ENST00000556809 MPHOSPH10O00566 681 aaKnown RBP26.84■■□□□ 1.89
PABPN1-206ENST00000556809 FOXP2O15409 715 aa26.84■■□□□ 1.89
PABPN1-206ENST00000556809 APPP05067 770 aa26.84■■□□□ 1.89
PABPN1-206ENST00000556809 TMEM179Q6ZVK1 233 aa26.84■■□□□ 1.89
PABPN1-206ENST00000556809 ZNF589Q86UQ0 364 aaPredicted RBP26.84■■□□□ 1.89
PABPN1-206ENST00000556809 SMCR8Q8TEV9 937 aaPredicted RBP26.84■■□□□ 1.89
PABPN1-206ENST00000556809 CCDC17Q96LX7 622 aa26.84■■□□□ 1.89
PABPN1-206ENST00000556809 GREB1LQ9C091 1923 aaPredicted RBP26.84■■□□□ 1.89
PABPN1-206ENST00000556809 CCDC171Q6TFL3 1326 aa26.84■■□□□ 1.89
PABPN1-206ENST00000556809 GNRH1P01148 92 aa26.83■■□□□ 1.89
PABPN1-206ENST00000556809 KIF22Q14807 665 aa26.83■■□□□ 1.89
PABPN1-206ENST00000556809 SIAH1Q8IUQ4 282 aa26.83■■□□□ 1.89
PABPN1-206ENST00000556809 TRIM47Q96LD4 638 aa26.83■■□□□ 1.89
PABPN1-206ENST00000556809 NACAP1Q9BZK3 213 aa26.83■■□□□ 1.89
PABPN1-206ENST00000556809 HTTP42858 3142 aa26.83■■□□□ 1.88
PABPN1-206ENST00000556809 A0A1W2PRG0 241 aa26.82■■□□□ 1.88
PABPN1-206ENST00000556809 OSBPP22059 807 aa26.82■■□□□ 1.88
PABPN1-206ENST00000556809 CHMLP26374 656 aa26.82■■□□□ 1.88
PABPN1-206ENST00000556809 TDO2P48775 406 aa26.82■■□□□ 1.88
PABPN1-206ENST00000556809 USP14P54578 494 aa26.82■■□□□ 1.88
PABPN1-206ENST00000556809 MFAP1P55081 439 aaKnown RBP26.82■■□□□ 1.88
PABPN1-206ENST00000556809 MINDY4BA8MYZ0 360 aa26.81■■□□□ 1.88
PABPN1-206ENST00000556809 PSMC4P43686 418 aa26.81■■□□□ 1.88
PABPN1-206ENST00000556809 VPS53Q5VIR6 699 aa26.81■■□□□ 1.88
PABPN1-206ENST00000556809 GCLCP48506 637 aaPredicted RBP26.8■■□□□ 1.88
PABPN1-206ENST00000556809 ANKRD13CQ8N6S4 541 aa26.8■■□□□ 1.88
PABPN1-206ENST00000556809 P2RX7Q99572 595 aaKnown RBP26.8■■□□□ 1.88
PABPN1-206ENST00000556809 FEZ1Q99689 392 aa26.8■■□□□ 1.88
PABPN1-206ENST00000556809 ZYXQ15942 572 aaKnown RBP26.79■■□□□ 1.88
PABPN1-206ENST00000556809 FAM110CQ1W6H9 321 aa26.79■■□□□ 1.88
PABPN1-206ENST00000556809 RUFY2Q8WXA3 655 aa26.79■■□□□ 1.88
PABPN1-206ENST00000556809 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.79■■□□□ 1.88
PABPN1-206ENST00000556809 NAPBQ9H115 298 aa26.79■■□□□ 1.88
PABPN1-206ENST00000556809 RAD50Q92878 1312 aa26.79■■□□□ 1.88
PABPN1-206ENST00000556809 ECM2O94769 699 aaPredicted RBP26.78■■□□□ 1.88
PABPN1-206ENST00000556809 RASA1P20936 1047 aa26.78■■□□□ 1.88
PABPN1-206ENST00000556809 CLEC10AQ8IUN9 316 aa26.78■■□□□ 1.88
PABPN1-206ENST00000556809 PTCH2Q9Y6C5 1203 aa26.78■■□□□ 1.88
PABPN1-206ENST00000556809 HSPD1P10809 573 aaKnown RBP26.77■■□□□ 1.88
PABPN1-206ENST00000556809 VCAM1P19320 739 aa26.77■■□□□ 1.88
PABPN1-206ENST00000556809 PRMT2P55345 433 aa26.77■■□□□ 1.88
PABPN1-206ENST00000556809 HERVK_113P62684 666 aa26.77■■□□□ 1.88
PABPN1-206ENST00000556809 IRX3P78415 501 aaPredicted RBP26.77■■□□□ 1.88
PABPN1-206ENST00000556809 POTEEQ6S8J3 1075 aa26.77■■□□□ 1.88
PABPN1-206ENST00000556809 MORF4L1Q9UBU8 362 aa26.77■■□□□ 1.88
PABPN1-206ENST00000556809 SRRDQ9UH36 339 aa26.77■■□□□ 1.88
PABPN1-206ENST00000556809 USP17L15C9J2P7 530 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 USP17L13C9JLJ4 530 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 USP17L11C9JVI0 530 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 USP17L18D6R9N7 530 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 USP17L22D6RA61 530 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 USP17L17D6RBQ6 530 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 USP17L19D6RCP7 530 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 USP17L20D6RJB6 530 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 FMNL1O95466 1100 aaPredicted RBP26.76■■□□□ 1.87
PABPN1-206ENST00000556809 FCGRTP55899 365 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 ICA1Q05084 483 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 USP17L24Q0WX57 530 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 CATSPERGQ6ZRH7 1159 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 STK11IPQ8N1F8 1099 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 ARMC5Q96C12 935 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 IL25Q9H293 177 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 KANSL2Q9H9L4 492 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 TMX2Q9Y320 296 aa26.76■■□□□ 1.87
PABPN1-206ENST00000556809 DOCK3Q8IZD9 2030 aa26.75■■□□□ 1.87
PABPN1-206ENST00000556809 PPARAQ07869 468 aa26.75■■□□□ 1.87
PABPN1-206ENST00000556809 ALX1Q15699 326 aa26.75■■□□□ 1.87
PABPN1-206ENST00000556809 KIAA1755Q5JYT7 1200 aa26.75■■□□□ 1.87
PABPN1-206ENST00000556809 MKNK2Q9HBH9 465 aa26.75■■□□□ 1.87
PABPN1-206ENST00000556809 RGS19P49795 217 aa26.74■■□□□ 1.87
PABPN1-206ENST00000556809 ARHGEF10LQ9HCE6 1279 aa26.74■■□□□ 1.87
PABPN1-206ENST00000556809 TXNRD2Q9NNW7 524 aa26.74■■□□□ 1.87
PABPN1-206ENST00000556809 RBPJLQ9UBG7 517 aa26.74■■□□□ 1.87
PABPN1-206ENST00000556809 RLFQ13129 1914 aa26.74■■□□□ 1.87
PABPN1-206ENST00000556809 ZMYM6O95789 1325 aa26.73■■□□□ 1.87
PABPN1-206ENST00000556809 EEF2P13639 858 aaKnown RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms