RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 PNMA1Q8ND90 353 aa21.16■□□□□ 0.98
SDR39U1-220ENST00000556548 KCNG4Q8TDN1 519 aa21.16■□□□□ 0.98
SDR39U1-220ENST00000556548 SUGT1Q9Y2Z0 365 aa21.16■□□□□ 0.98
SDR39U1-220ENST00000556548 SNW1Q13573 536 aaKnown RBP21.16■□□□□ 0.98
SDR39U1-220ENST00000556548 C16orf86Q6ZW13 317 aa21.16■□□□□ 0.98
SDR39U1-220ENST00000556548 NOSTRINQ8IVI9 506 aa21.16■□□□□ 0.98
SDR39U1-220ENST00000556548 PRPF3O43395 683 aaKnown RBP21.15■□□□□ 0.98
SDR39U1-220ENST00000556548 ADALQ6DHV7 355 aa21.15■□□□□ 0.98
SDR39U1-220ENST00000556548 RGS22Q8NE09 1264 aa21.15■□□□□ 0.98
SDR39U1-220ENST00000556548 CDK5RAP2Q96SN8 1893 aa21.15■□□□□ 0.98
SDR39U1-220ENST00000556548 RRP9O43818 475 aaKnown RBP21.15■□□□□ 0.98
SDR39U1-220ENST00000556548 CCDC173Q0VFZ6 552 aa21.15■□□□□ 0.98
SDR39U1-220ENST00000556548 DGKHQ86XP1 1220 aa21.15■□□□□ 0.98
SDR39U1-220ENST00000556548 C7orf43Q8WVR3 580 aa21.15■□□□□ 0.98
SDR39U1-220ENST00000556548 WDHD1O75717 1129 aaPredicted RBP21.14■□□□□ 0.97
SDR39U1-220ENST00000556548 CCDC192P0DO97 292 aa21.14■□□□□ 0.97
SDR39U1-220ENST00000556548 ATP2B1P20020 1258 aa21.14■□□□□ 0.97
SDR39U1-220ENST00000556548 STAG2Q8N3U4 1231 aa21.14■□□□□ 0.97
SDR39U1-220ENST00000556548 FBXO41Q8TF61 875 aa21.14■□□□□ 0.97
SDR39U1-220ENST00000556548 MRPS27Q92552 414 aaKnown RBP21.14■□□□□ 0.97
SDR39U1-220ENST00000556548 TEKT1Q969V4 418 aa21.14■□□□□ 0.97
SDR39U1-220ENST00000556548 RRAGDQ9NQL2 400 aaPredicted RBP21.14■□□□□ 0.97
SDR39U1-220ENST00000556548 CNTNAP5Q8WYK1 1306 aa21.14■□□□□ 0.97
SDR39U1-220ENST00000556548 DLEC1Q9Y238 1755 aa21.14■□□□□ 0.97
SDR39U1-220ENST00000556548 VEGFAP15692 232 aaPredicted RBP21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 NDUFA8P51970 172 aa21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 SLC39A14Q15043 492 aa21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 CDC42EP5Q6NZY7 148 aa21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 RASGRP2Q7LDG7 609 aa21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 ZNF287Q9HBT7 754 aa21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 CRKP46108 304 aa21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 RBM5P52756 815 aaKnown RBP eCLIP21.13■□□□□ 0.979e-7■■■■■ 31.4
SDR39U1-220ENST00000556548 CACNB3P54284 484 aa21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 TYRO3Q06418 890 aa21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 HSP90AA2PQ14568 343 aaPredicted RBP21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 APOBEC3HQ6NTF7 200 aaKnown RBP21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 ENGASEQ8NFI3 743 aa21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 MAP3K14Q99558 947 aa21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 TMEM47Q9BQJ4 181 aa21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 BAZ2BQ9UIF8 2168 aaKnown RBP21.13■□□□□ 0.97
SDR39U1-220ENST00000556548 SLURP2P0DP57 97 aa21.12■□□□□ 0.97
SDR39U1-220ENST00000556548 FAM160A1Q05DH4 1040 aa21.12■□□□□ 0.97
SDR39U1-220ENST00000556548 ERCC4Q92889 916 aaPredicted RBP21.12■□□□□ 0.97
SDR39U1-220ENST00000556548 ADAMTSL1Q8N6G6 1762 aa21.12■□□□□ 0.97
SDR39U1-220ENST00000556548 KINO60870 393 aaKnown RBP21.12■□□□□ 0.97
SDR39U1-220ENST00000556548 TOB1P50616 345 aaPredicted RBP21.12■□□□□ 0.97
SDR39U1-220ENST00000556548 NFIAQ12857 509 aa21.12■□□□□ 0.97
SDR39U1-220ENST00000556548 FOXP1Q9H334 677 aaPredicted RBP21.12■□□□□ 0.97
SDR39U1-220ENST00000556548 CABP5Q9NP86 173 aa21.12■□□□□ 0.97
SDR39U1-220ENST00000556548 SNED1Q8TER0 1413 aa21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 FAM205CA6NFA0 338 aa21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 XBP1P17861 261 aa21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 PTPAQ15257 358 aa21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 DACT2Q5SW24 774 aa21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 AXDND1Q5T1B0 1012 aaPredicted RBP21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 PPP1R9BQ96SB3 815 aa21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 TCP11L1Q9NUJ3 509 aa21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 GOLGA8HP0CJ92 632 aa21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 KIF5BP33176 963 aa21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 STRIP1Q5VSL9 837 aa21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 TRIM44Q96DX7 344 aaPredicted RBP21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 CLIC6Q96NY7 704 aa21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 MRVI1Q9Y6F6 885 aa21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 DDX60LQ5H9U9 1706 aaKnown RBP21.11■□□□□ 0.97
SDR39U1-220ENST00000556548 HHIPL2Q6UWX4 724 aa21.1■□□□□ 0.97
SDR39U1-220ENST00000556548 ZFPM1Q8IX07 1006 aa21.1■□□□□ 0.97
SDR39U1-220ENST00000556548 FMR1NBQ8N0W7 255 aaPredicted RBP21.1■□□□□ 0.97
SDR39U1-220ENST00000556548 ANKS1AQ92625 1134 aa21.1■□□□□ 0.97
SDR39U1-220ENST00000556548 CEP95Q96GE4 821 aa21.1■□□□□ 0.97
SDR39U1-220ENST00000556548 PHF20Q9BVI0 1012 aa21.1■□□□□ 0.97
SDR39U1-220ENST00000556548 A0A1W2PQ27 194 aa21.1■□□□□ 0.97
SDR39U1-220ENST00000556548 A0A1W2PQ64 194 aa21.1■□□□□ 0.97
SDR39U1-220ENST00000556548 A0A1W2PQD8 194 aa21.1■□□□□ 0.97
SDR39U1-220ENST00000556548 PPIP5K2O43314 1243 aa21.1■□□□□ 0.97
SDR39U1-220ENST00000556548 EARS2Q5JPH6 523 aaKnown RBP21.1■□□□□ 0.97
SDR39U1-220ENST00000556548 MAD2L2Q9UI95 211 aa21.1■□□□□ 0.97
SDR39U1-220ENST00000556548 MYH1P12882 1939 aa21.1■□□□□ 0.97
SDR39U1-220ENST00000556548 A0A087WWV3 80 aa21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 TCP10Q12799 353 aa21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 SASS6Q6UVJ0 657 aa21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 RBM43Q6ZSC3 357 aaKnown RBP21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 NEDD1Q8NHV4 660 aa21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 CPVLQ9H3G5 476 aa21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 PCDHB6Q9Y5E3 794 aa21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 KRT2P35908 639 aa21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 EIF6P56537 245 aaKnown RBP21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 PLCB2Q00722 1185 aa21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 ANO6Q4KMQ2 910 aa21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 CCDC178Q5BJE1 867 aa21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 NOM1Q5C9Z4 860 aaKnown RBP21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 USP25Q9UHP3 1055 aa21.09■□□□□ 0.97
SDR39U1-220ENST00000556548 MYH6P13533 1939 aa21.08■□□□□ 0.97
SDR39U1-220ENST00000556548 SCG2P13521 617 aa21.08■□□□□ 0.97
SDR39U1-220ENST00000556548 DPEP1P16444 411 aa21.08■□□□□ 0.97
SDR39U1-220ENST00000556548 KIAA2012Q0VF49 1180 aa21.08■□□□□ 0.97
SDR39U1-220ENST00000556548 GRM4Q14833 912 aa21.08■□□□□ 0.97
SDR39U1-220ENST00000556548 CLEC10AQ8IUN9 316 aa21.08■□□□□ 0.97
SDR39U1-220ENST00000556548 TTLL6Q8N841 843 aa21.08■□□□□ 0.97
SDR39U1-220ENST00000556548 GPKOWQ92917 476 aaPredicted RBP eCLIP21.08■□□□□ 0.97
SDR39U1-220ENST00000556548 OSBPL5Q9H0X9 879 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms