RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 PRDM10Q9NQV6 1147 aa7.09□□□□□ -1.27
SRP54-211ENST00000556445 MAGI3Q5TCQ9 1506 aa7.09□□□□□ -1.27
SRP54-211ENST00000556445 SLBPQ14493 270 aaKnown RBP eCLIP7.08□□□□□ -1.28
SRP54-211ENST00000556445 CDC37L1Q7L3B6 337 aa7.08□□□□□ -1.28
SRP54-211ENST00000556445 ARMCX6Q7L4S7 300 aa7.08□□□□□ -1.28
SRP54-211ENST00000556445 WFDC3Q8IUB2 231 aa7.08□□□□□ -1.28
SRP54-211ENST00000556445 GIPC2Q8TF65 315 aa7.08□□□□□ -1.28
SRP54-211ENST00000556445 SREK1Q8WXA9 508 aaKnown RBP7.08□□□□□ -1.28
SRP54-211ENST00000556445 HEXIM2Q96MH2 286 aaKnown RBP7.08□□□□□ -1.28
SRP54-211ENST00000556445 MIR1-1HGQ9H1L0 117 aa7.08□□□□□ -1.28
SRP54-211ENST00000556445 PLB1Q6P1J6 1458 aa7.08□□□□□ -1.28
SRP54-211ENST00000556445 HFM1A2PYH4 1435 aa7.08□□□□□ -1.28
SRP54-211ENST00000556445 LRIG2O94898 1065 aa7.07□□□□□ -1.28
SRP54-211ENST00000556445 LMNB1P20700 586 aa7.07□□□□□ -1.28
SRP54-211ENST00000556445 CAP2P40123 477 aa7.07□□□□□ -1.28
SRP54-211ENST00000556445 OXCT1P55809 520 aa7.07□□□□□ -1.28
SRP54-211ENST00000556445 NKG7Q16617 165 aa7.07□□□□□ -1.28
SRP54-211ENST00000556445 ANKRD13AQ8IZ07 590 aa7.07□□□□□ -1.28
SRP54-211ENST00000556445 PLD6Q8N2A8 252 aaKnown RBP7.07□□□□□ -1.28
SRP54-211ENST00000556445 MKNK2Q9HBH9 465 aa7.07□□□□□ -1.28
SRP54-211ENST00000556445 ANGEL1Q9UNK9 670 aaKnown RBP7.07□□□□□ -1.28
SRP54-211ENST00000556445 TACC3Q9Y6A5 838 aa7.07□□□□□ -1.28
SRP54-211ENST00000556445 F6X3S4 739 aa7.06□□□□□ -1.28
SRP54-211ENST00000556445 EOMESO95936 686 aa7.06□□□□□ -1.28
SRP54-211ENST00000556445 TCF3P15923 654 aa7.06□□□□□ -1.28
SRP54-211ENST00000556445 GRK4P32298 578 aa7.06□□□□□ -1.28
SRP54-211ENST00000556445 MRPL58Q14197 206 aaKnown RBP7.06□□□□□ -1.28
SRP54-211ENST00000556445 TSNAXIP1Q2TAA8 658 aa7.06□□□□□ -1.28
SRP54-211ENST00000556445 CERS3Q8IU89 383 aa7.06□□□□□ -1.28
SRP54-211ENST00000556445 NETO1Q8TDF5 533 aa7.06□□□□□ -1.28
SRP54-211ENST00000556445 BCL7CQ8WUZ0 217 aaPredicted RBP7.06□□□□□ -1.28
SRP54-211ENST00000556445 RHOVQ96L33 236 aa7.06□□□□□ -1.28
SRP54-211ENST00000556445 PLAGL2Q9UPG8 496 aa7.06□□□□□ -1.28
SRP54-211ENST00000556445 UACAQ9BZF9 1416 aa7.06□□□□□ -1.28
SRP54-211ENST00000556445 CLASP1Q7Z460 1538 aa7.06□□□□□ -1.28
SRP54-211ENST00000556445 KIF14Q15058 1648 aa7.05□□□□□ -1.28
SRP54-211ENST00000556445 SLITRK5O94991 958 aa7.05□□□□□ -1.28
SRP54-211ENST00000556445 NCLP19338 710 aaKnown RBP7.05□□□□□ -1.28
SRP54-211ENST00000556445 ETF1P62495 437 aaKnown RBP7.05□□□□□ -1.28
SRP54-211ENST00000556445 LMNB2Q03252 620 aa7.05□□□□□ -1.28
SRP54-211ENST00000556445 CCDC84Q86UT8 332 aaPredicted RBP7.05□□□□□ -1.28
SRP54-211ENST00000556445 HID1Q8IV36 788 aa7.05□□□□□ -1.28
SRP54-211ENST00000556445 ABI1Q8IZP0 508 aa7.05□□□□□ -1.28
SRP54-211ENST00000556445 FBXL18Q96ME1 805 aa7.05□□□□□ -1.28
SRP54-211ENST00000556445 RSRP1Q9BUV0 290 aa7.05□□□□□ -1.28
SRP54-211ENST00000556445 FOXQ1Q9C009 403 aa7.05□□□□□ -1.28
SRP54-211ENST00000556445 PAK6Q9NQU5 681 aaPredicted RBP7.05□□□□□ -1.28
SRP54-211ENST00000556445 ROCK1Q13464 1354 aa7.05□□□□□ -1.28
SRP54-211ENST00000556445 ATP10BO94823 1461 aa7.04□□□□□ -1.28
SRP54-211ENST00000556445 GCC2Q8IWJ2 1684 aa7.04□□□□□ -1.28
SRP54-211ENST00000556445 FAM221AA4D161 298 aa7.04□□□□□ -1.28
SRP54-211ENST00000556445 IGF2BP3O00425 579 aaKnown RBP eCLIP7.04□□□□□ -1.28
SRP54-211ENST00000556445 CEACAM5P06731 702 aa7.04□□□□□ -1.28
SRP54-211ENST00000556445 RPL6Q02878 288 aaKnown RBP7.04□□□□□ -1.28
SRP54-211ENST00000556445 CAMK2GQ13555 558 aaPredicted RBP7.04□□□□□ -1.28
SRP54-211ENST00000556445 ZNF326Q5BKZ1 582 aaKnown RBP7.04□□□□□ -1.28
SRP54-211ENST00000556445 MCTP1Q6DN14 999 aa7.04□□□□□ -1.28
SRP54-211ENST00000556445 BNC2Q6ZN30 1099 aaPredicted RBP7.04□□□□□ -1.28
SRP54-211ENST00000556445 FLCNQ8NFG4 579 aa7.04□□□□□ -1.28
SRP54-211ENST00000556445 JARID2Q92833 1246 aaPredicted RBP7.04□□□□□ -1.28
SRP54-211ENST00000556445 TMEM74Q96NL1 305 aa7.04□□□□□ -1.28
SRP54-211ENST00000556445 ADGRE2Q9UHX3 823 aa7.04□□□□□ -1.28
SRP54-211ENST00000556445 DNMT1P26358 1616 aaKnown RBP7.04□□□□□ -1.28
SRP54-211ENST00000556445 UHRF1BP1LA0JNW5 1464 aa7.04□□□□□ -1.28
SRP54-211ENST00000556445 ARID4BQ4LE39 1312 aaPredicted RBP7.03□□□□□ -1.28
SRP54-211ENST00000556445 NAIPQ13075 1403 aa7.03□□□□□ -1.28
SRP54-211ENST00000556445 ABCC2Q92887 1545 aa7.03□□□□□ -1.28
SRP54-211ENST00000556445 CILPO75339 1184 aa7.03□□□□□ -1.28
SRP54-211ENST00000556445 CST3P01034 146 aaPredicted RBP7.03□□□□□ -1.28
SRP54-211ENST00000556445 PF4P02776 101 aa7.03□□□□□ -1.28
SRP54-211ENST00000556445 ZNF16P17020 682 aaPredicted RBP7.03□□□□□ -1.28
SRP54-211ENST00000556445 IFI16Q16666 785 aaKnown RBP7.03□□□□□ -1.28
SRP54-211ENST00000556445 ZNF574Q6ZN55 896 aaPredicted RBP7.03□□□□□ -1.28
SRP54-211ENST00000556445 ERMP1Q7Z2K6 904 aa7.03□□□□□ -1.28
SRP54-211ENST00000556445 SPRED2Q7Z698 418 aa7.03□□□□□ -1.28
SRP54-211ENST00000556445 MISP3Q96FF7 219 aa7.03□□□□□ -1.28
SRP54-211ENST00000556445 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
SRP54-211ENST00000556445 TNKS2Q9H2K2 1166 aa7.03□□□□□ -1.28
SRP54-211ENST00000556445 TJP2Q9UDY2 1190 aa7.03□□□□□ -1.28
SRP54-211ENST00000556445 CFDP1Q9UEE9 299 aaPredicted RBP7.03□□□□□ -1.28
SRP54-211ENST00000556445 GTF2IRD1Q9UHL9 959 aa7.03□□□□□ -1.28
SRP54-211ENST00000556445 SLC5A6Q9Y289 635 aa7.03□□□□□ -1.28
SRP54-211ENST00000556445 COL17A1Q9UMD9 1497 aaPredicted RBP7.03□□□□□ -1.28
SRP54-211ENST00000556445 CNTNAP4Q9C0A0 1308 aa7.02□□□□□ -1.28
SRP54-211ENST00000556445 GPATCH8Q9UKJ3 1502 aaKnown RBP7.02□□□□□ -1.29
SRP54-211ENST00000556445 F13A1P00488 732 aa7.02□□□□□ -1.29
SRP54-211ENST00000556445 IRAK1P51617 712 aa7.02□□□□□ -1.29
SRP54-211ENST00000556445 BNIP3Q12983 259 aa7.02□□□□□ -1.29
SRP54-211ENST00000556445 PRAMEF13Q5VWM6 474 aa7.02□□□□□ -1.29
SRP54-211ENST00000556445 STK11IPQ8N1F8 1099 aa7.02□□□□□ -1.29
SRP54-211ENST00000556445 DAPK1P53355 1430 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 CAMSAP2Q08AD1 1489 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 PGRP06401 933 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 ITIH2P19823 946 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 GARTP22102 1010 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 GBP2P32456 591 aaPredicted RBP7.01□□□□□ -1.29
SRP54-211ENST00000556445 PRKCQQ04759 706 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 PWP1Q13610 501 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 LDLRAD1Q5T700 205 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 CBLL1Q75N03 491 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms