RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CXCL11O14625 94 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 POLR3DP05423 398 aaPredicted RBP11.58□□□□□ -0.56
SRP54-210ENST00000556380 SDSP20132 328 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 SHMT1P34896 483 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 LSM11P83369 360 aaKnown RBP eCLIP11.58□□□□□ -0.56
SRP54-210ENST00000556380 MOGSQ13724 837 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 SHROOM1Q2M3G4 852 aaPredicted RBP11.58□□□□□ -0.56
SRP54-210ENST00000556380 SBK1Q52WX2 424 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 CTR9Q6PD62 1173 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 BRI3BPQ8WY22 251 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 RILPL2Q969X0 211 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 FAM227BQ96M60 508 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 CRISPLD2Q9H0B8 497 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 EPB41L4AQ9HCS5 686 aaPredicted RBP11.58□□□□□ -0.56
SRP54-210ENST00000556380 HELLSQ9NRZ9 838 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.58□□□□□ -0.56
SRP54-210ENST00000556380 AFG3L2Q9Y4W6 797 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 ZHX2Q9Y6X8 837 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 IGF2BP3O00425 579 aaKnown RBP eCLIP11.57□□□□□ -0.56
SRP54-210ENST00000556380 CA12O43570 354 aa11.57□□□□□ -0.56
SRP54-210ENST00000556380 NEFLP07196 543 aa11.57□□□□□ -0.56
SRP54-210ENST00000556380 HSPA8P11142 646 aaKnown RBP11.57□□□□□ -0.56
SRP54-210ENST00000556380 GNAT2P19087 354 aa11.57□□□□□ -0.56
SRP54-210ENST00000556380 GTF2A2P52657 109 aa11.57□□□□□ -0.56
SRP54-210ENST00000556380 SREBF2Q12772 1141 aa11.57□□□□□ -0.56
SRP54-210ENST00000556380 NMIQ13287 307 aaPredicted RBP11.57□□□□□ -0.56
SRP54-210ENST00000556380 MCMDC2Q4G0Z9 681 aa11.57□□□□□ -0.56
SRP54-210ENST00000556380 POTEEQ6S8J3 1075 aa11.57□□□□□ -0.56
SRP54-210ENST00000556380 CCDC129Q6ZRS4 1044 aa11.57□□□□□ -0.56
SRP54-210ENST00000556380 SKAP1Q86WV1 359 aa11.57□□□□□ -0.56
SRP54-210ENST00000556380 CRACR2BQ8N4Y2 399 aaPredicted RBP11.57□□□□□ -0.56
SRP54-210ENST00000556380 CCDC136Q96JN2 1154 aa11.57□□□□□ -0.56
SRP54-210ENST00000556380 PICK1Q9NRD5 415 aa11.57□□□□□ -0.56
SRP54-210ENST00000556380 GINM1Q9NU53 330 aa11.57□□□□□ -0.56
SRP54-210ENST00000556380 SAGE1Q9NXZ1 904 aa11.57□□□□□ -0.56
SRP54-210ENST00000556380 DDX60LQ5H9U9 1706 aaKnown RBP11.57□□□□□ -0.56
SRP54-210ENST00000556380 SNAPC2Q13487 334 aa11.56□□□□□ -0.56
SRP54-210ENST00000556380 VPS53Q5VIR6 699 aa11.56□□□□□ -0.56
SRP54-210ENST00000556380 CCDC84Q86UT8 332 aaPredicted RBP11.56□□□□□ -0.56
SRP54-210ENST00000556380 IFNL3Q8IZI9 196 aa11.56□□□□□ -0.56
SRP54-210ENST00000556380 SLC44A5Q8NCS7 719 aa11.56□□□□□ -0.56
SRP54-210ENST00000556380 RNF166Q96A37 237 aaPredicted RBP11.56□□□□□ -0.56
SRP54-210ENST00000556380 DYNLL2Q96FJ2 89 aa11.56□□□□□ -0.56
SRP54-210ENST00000556380 CFHR5Q9BXR6 569 aa11.56□□□□□ -0.56
SRP54-210ENST00000556380 MYH1P12882 1939 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 CCL15-CCL14A0A0B4J2E2 113 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 TRPA1O75762 1119 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 GDF11O95390 407 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 ASNSP08243 561 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 CETPP11597 493 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 GUCY1A2P33402 732 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 PBX2P40425 430 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 CTCFP49711 727 aaPredicted RBP11.55□□□□□ -0.56
SRP54-210ENST00000556380 ALX1Q15699 326 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 CCL15Q16663 113 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 CERKLQ49MI3 558 aaPredicted RBP11.55□□□□□ -0.56
SRP54-210ENST00000556380 C16orf86Q6ZW13 317 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 ZNF589Q86UQ0 364 aaPredicted RBP11.55□□□□□ -0.56
SRP54-210ENST00000556380 BEGAINQ9BUH8 593 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 WDR18Q9BV38 432 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 R3HDMLQ9H3Y0 253 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 ZBTB21Q9ULJ3 1066 aa11.55□□□□□ -0.56
SRP54-210ENST00000556380 A0A0G2JLL6 359 aaPredicted RBP11.54□□□□□ -0.56
SRP54-210ENST00000556380 USP17L5A8MUK1 530 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 HIP1O00291 1037 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 GH2P01242 217 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 CDK8P49336 464 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 GPAT2Q6NUI2 795 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 PRRT2Q7Z6L0 340 aaPredicted RBP11.54□□□□□ -0.56
SRP54-210ENST00000556380 FAM43AQ8N2R8 423 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 ZNF280CQ8ND82 737 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 DDRGK1Q96HY6 314 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 TRIM34Q9BYJ4 488 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 TBC1D2Q9BYX2 928 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 PPP4R2Q9NY27 417 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 ARPP21Q9UBL0 812 aaPredicted RBP11.54□□□□□ -0.56
SRP54-210ENST00000556380 SWAP70Q9UH65 585 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 TSKSQ9UJT2 592 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 LAMB1P07942 1786 aa11.54□□□□□ -0.56
SRP54-210ENST00000556380 BTBD19C9JJ37 291 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 ALDH1A1P00352 501 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 FGAP02671 866 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 APPP05067 770 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 HSPD1P10809 573 aaKnown RBP11.53□□□□□ -0.56
SRP54-210ENST00000556380 CHMLP26374 656 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 LBX1P52954 281 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 SPP2Q13103 211 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 ABCB5Q2M3G0 1257 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 NOM1Q5C9Z4 860 aaKnown RBP11.53□□□□□ -0.56
SRP54-210ENST00000556380 SH3D19Q5HYK7 790 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 CWC27Q6UX04 472 aaKnown RBP11.53□□□□□ -0.56
SRP54-210ENST00000556380 SIAH1Q8IUQ4 282 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 NACAP1Q9BZK3 213 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 IL25Q9H293 177 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 ZCCHC17Q9NP64 241 aaKnown RBP11.53□□□□□ -0.56
SRP54-210ENST00000556380 PRDM10Q9NQV6 1147 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 CCDC171Q6TFL3 1326 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 NAV1Q8NEY1 1877 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 ROBO3Q96MS0 1386 aa11.53□□□□□ -0.56
SRP54-210ENST00000556380 TRIM75PA6NK02 468 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms