RNA–Protein interactions for RNA: ENST00000556330.5

SRSF5-213, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-213ENST00000556330 ENAHQ8N8S7 591 aaPredicted RBP11.13□□□□□ -0.63
SRSF5-213ENST00000556330 CTCFLQ8NI51 663 aaPredicted RBP11.13□□□□□ -0.63
SRSF5-213ENST00000556330 TMC2Q8TDI7 906 aa11.13□□□□□ -0.63
SRSF5-213ENST00000556330 GMLQ99445 158 aa11.13□□□□□ -0.63
SRSF5-213ENST00000556330 LZTS2Q9BRK4 669 aa11.13□□□□□ -0.63
SRSF5-213ENST00000556330 LARP6Q9BRS8 491 aaKnown RBP11.13□□□□□ -0.63
SRSF5-213ENST00000556330 KAT14Q9H8E8 782 aa11.13□□□□□ -0.63
SRSF5-213ENST00000556330 PI4KBQ9UBF8 816 aa11.13□□□□□ -0.63
SRSF5-213ENST00000556330 HPS5Q9UPZ3 1129 aa11.13□□□□□ -0.63
SRSF5-213ENST00000556330 BCS1LQ9Y276 419 aa11.13□□□□□ -0.63
SRSF5-213ENST00000556330 FER1L6Q2WGJ9 1857 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 YDJCA8MPS7 323 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 PSMD14O00487 310 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 NCLP19338 710 aaKnown RBP11.12□□□□□ -0.63
SRSF5-213ENST00000556330 CDK8P49336 464 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 SCNN1DP51172 638 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 TFAP4Q01664 338 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 AKAP17AQ02040 695 aaKnown RBP11.12□□□□□ -0.63
SRSF5-213ENST00000556330 SSRP1Q08945 709 aaKnown RBP11.12□□□□□ -0.63
SRSF5-213ENST00000556330 ST3GAL1Q11201 340 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 TRIM29Q14134 588 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 CFAP100Q494V2 611 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 MICU3Q86XE3 530 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 FANCBQ8NB91 859 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 NEDD1Q8NHV4 660 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 DPF2Q92785 391 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 SYNPO2Q9UMS6 1093 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 MTMR6Q9Y217 621 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 ATRNL1Q5VV63 1379 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 ARFGEF1Q9Y6D6 1849 aa11.12□□□□□ -0.63
SRSF5-213ENST00000556330 CYP2D7A0A087X1C5 515 aa11.11□□□□□ -0.63
SRSF5-213ENST00000556330 VPS37CA5D8V6 355 aaPredicted RBP11.11□□□□□ -0.63
SRSF5-213ENST00000556330 PSDA5PKW4 1024 aaPredicted RBP11.11□□□□□ -0.63
SRSF5-213ENST00000556330 MBD3O95983 291 aa11.11□□□□□ -0.63
SRSF5-213ENST00000556330 TNNI2P48788 182 aa11.11□□□□□ -0.63
SRSF5-213ENST00000556330 GABPAQ06546 454 aa11.11□□□□□ -0.63
SRSF5-213ENST00000556330 PICALMQ13492 652 aa11.11□□□□□ -0.63
SRSF5-213ENST00000556330 TNFAIP1Q13829 316 aa11.11□□□□□ -0.63
SRSF5-213ENST00000556330 COL9A3Q14050 684 aaPredicted RBP11.11□□□□□ -0.63
SRSF5-213ENST00000556330 NBR1Q14596 966 aa11.11□□□□□ -0.63
SRSF5-213ENST00000556330 FAM83AQ86UY5 434 aa11.11□□□□□ -0.63
SRSF5-213ENST00000556330 RNF26Q9BY78 433 aaPredicted RBP11.11□□□□□ -0.63
SRSF5-213ENST00000556330 ORC3Q9UBD5 711 aaPredicted RBP11.11□□□□□ -0.63
SRSF5-213ENST00000556330 HERC5Q9UII4 1024 aaKnown RBP11.11□□□□□ -0.63
SRSF5-213ENST00000556330 CFAP45Q9UL16 551 aa11.11□□□□□ -0.63
SRSF5-213ENST00000556330 ZDHHC9Q9Y397 364 aa11.11□□□□□ -0.63
SRSF5-213ENST00000556330 ZNF646O15015 1829 aaPredicted RBP11.1□□□□□ -0.63
SRSF5-213ENST00000556330 BAZ2AQ9UIF9 1905 aaKnown RBP11.1□□□□□ -0.63
SRSF5-213ENST00000556330 NFKBIEO00221 500 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 PRDM1O75626 825 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 RAD17O75943 681 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 DEXIO95424 95 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 FMNL1O95466 1100 aaPredicted RBP11.1□□□□□ -0.63
SRSF5-213ENST00000556330 CTDNEP1O95476 244 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 CYP2D6P10635 497 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 RASA1P20936 1047 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 SMARCA1P28370 1054 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 PLCD1P51178 756 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 KRT85P78386 507 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 BRAPQ7Z569 592 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 METTL16Q86W50 562 aaKnown RBP11.1□□□□□ -0.63
SRSF5-213ENST00000556330 CRACR2BQ8N4Y2 399 aaPredicted RBP11.1□□□□□ -0.63
SRSF5-213ENST00000556330 TMEM87AQ8NBN3 555 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 HOOK2Q96ED9 719 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 C8orf76Q96K31 380 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 SCAND2PQ9GZW5 306 aaPredicted RBP11.1□□□□□ -0.63
SRSF5-213ENST00000556330 KCNQ5Q9NR82 932 aa11.1□□□□□ -0.63
SRSF5-213ENST00000556330 SAP30BPQ9UHR5 308 aaKnown RBP11.1□□□□□ -0.63
SRSF5-213ENST00000556330 FZD9O00144 591 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 JAK2O60674 1132 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 TOP1P11387 765 aaKnown RBP11.09□□□□□ -0.63
SRSF5-213ENST00000556330 LMNB1P20700 586 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 NOVP48745 357 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 ZNF280AP59817 542 aaPredicted RBP11.09□□□□□ -0.63
SRSF5-213ENST00000556330 CXCL9Q07325 125 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 TROAPQ12815 778 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 PKP1Q13835 747 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 SAFBQ15424 915 aaKnown RBP eCLIP11.09□□□□□ -0.63
SRSF5-213ENST00000556330 FBXO18Q8NFZ0 1043 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 FAM151AQ8WW52 585 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 ZNF396Q96N95 335 aaPredicted RBP11.09□□□□□ -0.63
SRSF5-213ENST00000556330 ZKSCAN3Q9BRR0 538 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 MXD3Q9BW11 206 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 NCOA5Q9HCD5 579 aaKnown RBP11.09□□□□□ -0.63
SRSF5-213ENST00000556330 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.09□□□□□ -0.63
SRSF5-213ENST00000556330 TACC3Q9Y6A5 838 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 ELP1O95163 1332 aa11.09□□□□□ -0.63
SRSF5-213ENST00000556330 SCN9AQ15858 1988 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 MYH1P12882 1939 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 ECM29Q5VYK3 1845 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 TTLL1O95922 423 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 ADD1P35611 737 aaKnown RBP11.08□□□□□ -0.64
SRSF5-213ENST00000556330 NTRK3Q16288 839 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 KLHL40Q2TBA0 621 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 FAM47AQ5JRC9 791 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 MCTP1Q6DN14 999 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 ZSCAN29Q8IWY8 852 aaPredicted RBP11.08□□□□□ -0.64
SRSF5-213ENST00000556330 PNMA1Q8ND90 353 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 NUP133Q8WUM0 1156 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms