RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ARHGAP39Q9C0H5 1083 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 ELP3Q9H9T3 547 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 LEMD3Q9Y2U8 911 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 NDUFB9Q9Y6M9 179 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 SSC5DA1L4H1 1573 aa8.86□□□□□ -0.99
ATXN3-236ENST00000556220 CCL15-CCL14A0A0B4J2E2 113 aa8.86□□□□□ -0.99
ATXN3-236ENST00000556220 CHL1O00533 1208 aa8.86□□□□□ -0.99
ATXN3-236ENST00000556220 MYO1BO43795 1136 aa8.86□□□□□ -0.99
ATXN3-236ENST00000556220 WDHD1O75717 1129 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-236ENST00000556220 HOXB7P09629 217 aa8.86□□□□□ -0.99
ATXN3-236ENST00000556220 SLURP2P0DP57 97 aa8.86□□□□□ -0.99
ATXN3-236ENST00000556220 KCNMA1Q12791 1236 aa8.86□□□□□ -0.99
ATXN3-236ENST00000556220 CCL15Q16663 113 aa8.86□□□□□ -0.99
ATXN3-236ENST00000556220 FAM43AQ8N2R8 423 aa8.86□□□□□ -0.99
ATXN3-236ENST00000556220 JARID2Q92833 1246 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-236ENST00000556220 PRMT6Q96LA8 375 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-236ENST00000556220 STAP2Q9UGK3 403 aa8.86□□□□□ -0.99
ATXN3-236ENST00000556220 PCDHAC2Q9Y5I4 1007 aa8.86□□□□□ -0.99
ATXN3-236ENST00000556220 A0A1W2PRU2 124 aa8.85□□□□□ -0.99
ATXN3-236ENST00000556220 CLRN2A0PK11 232 aa8.85□□□□□ -0.99
ATXN3-236ENST00000556220 RASA3Q14644 834 aa8.85□□□□□ -0.99
ATXN3-236ENST00000556220 CFAP100Q494V2 611 aa8.85□□□□□ -0.99
ATXN3-236ENST00000556220 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-236ENST00000556220 PRICKLE2Q7Z3G6 844 aa8.85□□□□□ -0.99
ATXN3-236ENST00000556220 GMCL1Q96IK5 515 aa8.85□□□□□ -0.99
ATXN3-236ENST00000556220 MYD88Q99836 296 aa8.85□□□□□ -0.99
ATXN3-236ENST00000556220 VEZTQ9HBM0 779 aa8.85□□□□□ -0.99
ATXN3-236ENST00000556220 STXBP5LQ9Y2K9 1186 aa8.85□□□□□ -0.99
ATXN3-236ENST00000556220 CCL5P13501 91 aa8.84□□□□□ -0.99
ATXN3-236ENST00000556220 KLRK1P26718 216 aa8.84□□□□□ -0.99
ATXN3-236ENST00000556220 HOXD10P28358 340 aa8.84□□□□□ -0.99
ATXN3-236ENST00000556220 GRK4P32298 578 aa8.84□□□□□ -0.99
ATXN3-236ENST00000556220 LMOD3Q0VAK6 560 aa8.84□□□□□ -0.99
ATXN3-236ENST00000556220 CERS5Q8N5B7 392 aa8.84□□□□□ -0.99
ATXN3-236ENST00000556220 DEFB123Q8N688 67 aa8.84□□□□□ -0.99
ATXN3-236ENST00000556220 TTLL11Q8NHH1 800 aa8.84□□□□□ -0.99
ATXN3-236ENST00000556220 RNF208Q9H0X6 261 aa8.84□□□□□ -0.99
ATXN3-236ENST00000556220 CD209Q9NNX6 404 aa8.84□□□□□ -0.99
ATXN3-236ENST00000556220 ZCCHC17Q9NP64 241 aaKnown RBP8.84□□□□□ -0.99
ATXN3-236ENST00000556220 CWC25Q9NXE8 425 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-236ENST00000556220 SRRDQ9UH36 339 aa8.84□□□□□ -0.99
ATXN3-236ENST00000556220 ADAMTS8Q9UP79 889 aa8.84□□□□□ -0.99
ATXN3-236ENST00000556220 PSME4Q14997 1843 aa8.84□□□□□ -0.99
ATXN3-236ENST00000556220 SPTBN5Q9NRC6 3674 aaKnown RBP8.83□□□□□ -1
ATXN3-236ENST00000556220 BTBD19C9JJ37 291 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 MEN1O00255 615 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 GPR37L1O60883 481 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 FARP2O94887 1054 aaPredicted RBP8.83□□□□□ -1
ATXN3-236ENST00000556220 CTGFP29279 349 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 BMP8BP34820 402 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 TMPOP42166 694 aaKnown RBP8.83□□□□□ -1
ATXN3-236ENST00000556220 PSMC4P43686 418 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 CTSWP56202 376 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 UBXN2AP68543 259 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 ZNF385CQ66K41 422 aaPredicted RBP8.83□□□□□ -1
ATXN3-236ENST00000556220 C17orf99Q6UX52 265 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 CYP2U1Q7Z449 544 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 RAET1EQ8TD07 263 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 ANKRD2Q9GZV1 360 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 GREM2Q9H772 168 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 RIPOR2Q9Y4F9 1068 aa8.83□□□□□ -1
ATXN3-236ENST00000556220 LAS1LQ9Y4W2 734 aaKnown RBP8.83□□□□□ -1
ATXN3-236ENST00000556220 TTC28Q96AY4 2481 aa8.82□□□□□ -1
ATXN3-236ENST00000556220 AOX1Q06278 1338 aa8.82□□□□□ -1
ATXN3-236ENST00000556220 F8W031 263 aaPredicted RBP8.82□□□□□ -1
ATXN3-236ENST00000556220 SGPL1O95470 568 aa8.82□□□□□ -1
ATXN3-236ENST00000556220 CETPP11597 493 aa8.82□□□□□ -1
ATXN3-236ENST00000556220 CAPN2P17655 700 aa8.82□□□□□ -1
ATXN3-236ENST00000556220 IGHMBP2P38935 993 aaKnown RBP8.82□□□□□ -1
ATXN3-236ENST00000556220 FKBP1AP62942 108 aaKnown RBP8.82□□□□□ -1
ATXN3-236ENST00000556220 TNFAIP1Q13829 316 aa8.82□□□□□ -1
ATXN3-236ENST00000556220 VGLL4Q14135 290 aa8.82□□□□□ -1
ATXN3-236ENST00000556220 Q7L0L9 218 aa8.82□□□□□ -1
ATXN3-236ENST00000556220 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.82□□□□□ -1
ATXN3-236ENST00000556220 U2AF1L4Q8WU68 220 aaKnown RBP8.82□□□□□ -1
ATXN3-236ENST00000556220 TEPSINQ96N21 525 aa8.82□□□□□ -1
ATXN3-236ENST00000556220 METTL22Q9BUU2 404 aaPredicted RBP8.82□□□□□ -1
ATXN3-236ENST00000556220 PHAXQ9H814 394 aaKnown RBP8.82□□□□□ -1
ATXN3-236ENST00000556220 MTMR10Q9NXD2 777 aa8.82□□□□□ -1
ATXN3-236ENST00000556220 BIN2Q9UBW5 565 aaPredicted RBP8.82□□□□□ -1
ATXN3-236ENST00000556220 CSADQ9Y600 493 aa8.82□□□□□ -1
ATXN3-236ENST00000556220 RNF225M0QZC1 329 aaPredicted RBP8.81□□□□□ -1
ATXN3-236ENST00000556220 RHOQP17081 205 aa8.81□□□□□ -1
ATXN3-236ENST00000556220 RBM5P52756 815 aaKnown RBP eCLIP8.81□□□□□ -1
ATXN3-236ENST00000556220 CLN3Q13286 438 aa8.81□□□□□ -1
ATXN3-236ENST00000556220 SNAPC2Q13487 334 aa8.81□□□□□ -1
ATXN3-236ENST00000556220 LRIT3Q3SXY7 679 aa8.81□□□□□ -1
ATXN3-236ENST00000556220 DUSP27Q5VZP5 1158 aa8.81□□□□□ -1
ATXN3-236ENST00000556220 SVOPQ8N4V2 548 aa8.81□□□□□ -1
ATXN3-236ENST00000556220 GDF15Q99988 308 aa8.81□□□□□ -1
ATXN3-236ENST00000556220 SNRKQ9NRH2 765 aa8.81□□□□□ -1
ATXN3-236ENST00000556220 ZNF70Q9UC06 446 aaPredicted RBP8.81□□□□□ -1
ATXN3-236ENST00000556220 PCDHB11Q9Y5F2 797 aa8.81□□□□□ -1
ATXN3-236ENST00000556220 DLG5Q8TDM6 1919 aa8.81□□□□□ -1
ATXN3-236ENST00000556220 TRAK2O60296 914 aa8.8□□□□□ -1
ATXN3-236ENST00000556220 IL1R1P14778 569 aa8.8□□□□□ -1
ATXN3-236ENST00000556220 SCTRP47872 440 aa8.8□□□□□ -1
ATXN3-236ENST00000556220 KCNJ4P48050 445 aa8.8□□□□□ -1
ATXN3-236ENST00000556220 GSK3AP49840 483 aa8.8□□□□□ -1
ATXN3-236ENST00000556220 SRSF11Q05519 484 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms