RNA–Protein interactions for RNA: ENST00000556112.5

NUMB-220, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 4

Gene NUMB, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-220ENST00000556112 PARD3Q8TEW0 1356 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 PLEKHG2Q9H7P9 1386 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 PEAK1Q9H792 1746 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 PARP4Q9UKK3 1724 aaKnown RBP5.72□□□□□ -1.49
NUMB-220ENST00000556112 ANKRD33BA6NCL7 494 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 LINC01387J3KSC0 135 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 NFKBIEO00221 500 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 PDE2AO00408 941 aaPredicted RBP5.72□□□□□ -1.49
NUMB-220ENST00000556112 POLR3DP05423 398 aaPredicted RBP5.72□□□□□ -1.49
NUMB-220ENST00000556112 HSP90AB1P08238 724 aaKnown RBP5.72□□□□□ -1.49
NUMB-220ENST00000556112 PHKG2P15735 406 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 GATA4P43694 442 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 NRG1Q02297 640 aaPredicted RBP5.72□□□□□ -1.49
NUMB-220ENST00000556112 TXNRD1Q16881 649 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 TXNDC11Q6PKC3 985 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 ALKBH8Q96BT7 664 aaKnown RBP5.72□□□□□ -1.49
NUMB-220ENST00000556112 HHIPQ96QV1 700 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 ZKSCAN3Q9BRR0 538 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 MEGF6O75095 1541 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 NCAPD2Q15021 1401 aa5.72□□□□□ -1.49
NUMB-220ENST00000556112 KDRP35968 1356 aa5.71□□□□□ -1.5
NUMB-220ENST00000556112 GPR182O15218 404 aa5.71□□□□□ -1.5
NUMB-220ENST00000556112 TREHO43280 583 aa5.71□□□□□ -1.5
NUMB-220ENST00000556112 U2AF1L5P0DN76 240 aaPredicted RBP5.71□□□□□ -1.5
NUMB-220ENST00000556112 EPHA1P21709 976 aa5.71□□□□□ -1.5
NUMB-220ENST00000556112 HMGB2P26583 209 aaKnown RBP5.71□□□□□ -1.5
NUMB-220ENST00000556112 U2AF1Q01081 240 aaKnown RBP eCLIP5.71□□□□□ -1.5
NUMB-220ENST00000556112 ORC1Q13415 861 aa5.71□□□□□ -1.5
NUMB-220ENST00000556112 SETDB1Q15047 1291 aa5.71□□□□□ -1.5
NUMB-220ENST00000556112 MPRIPQ6WCQ1 1025 aa5.71□□□□□ -1.5
NUMB-220ENST00000556112 MAP4K3Q8IVH8 894 aa5.71□□□□□ -1.5
NUMB-220ENST00000556112 TMEM102Q8N9M5 508 aaPredicted RBP5.71□□□□□ -1.5
NUMB-220ENST00000556112 LENG1Q96BZ8 264 aaPredicted RBP5.71□□□□□ -1.5
NUMB-220ENST00000556112 NIF3L1Q9GZT8 377 aa5.71□□□□□ -1.5
NUMB-220ENST00000556112 ADAM19Q9H013 955 aa5.71□□□□□ -1.5
NUMB-220ENST00000556112 PRKRIP1Q9H875 184 aaPredicted RBP5.71□□□□□ -1.5
NUMB-220ENST00000556112 LATS2Q9NRM7 1088 aa5.71□□□□□ -1.5
NUMB-220ENST00000556112 FAM208AQ9UK61 1670 aaKnown RBP5.71□□□□□ -1.5
NUMB-220ENST00000556112 ANKRD26Q9UPS8 1709 aa5.71□□□□□ -1.5
NUMB-220ENST00000556112 ERVV-2B6SEH9 535 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 CABP4P57796 275 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 PLCB3Q01970 1234 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 ADGRE1Q14246 886 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 DSC3Q14574 896 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 COL19A1Q14993 1142 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 MTHFSDQ2M296 383 aaKnown RBP5.7□□□□□ -1.5
NUMB-220ENST00000556112 AKAP4Q5JQC9 854 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 C1orf141Q5JVX7 400 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 PEAR1Q5VY43 1037 aaPredicted RBP5.7□□□□□ -1.5
NUMB-220ENST00000556112 USPL1Q5W0Q7 1092 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 FAM117BQ6P1L5 589 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 ZNF530Q6P9A1 599 aaPredicted RBP5.7□□□□□ -1.5
NUMB-220ENST00000556112 IGF2-ASQ6U949 168 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 ASAP3Q8TDY4 903 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 NXPE3Q969Y0 559 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 PNNQ9H307 717 aaKnown RBP5.7□□□□□ -1.5
NUMB-220ENST00000556112 SRA1Q9HD15 236 aaKnown RBP5.7□□□□□ -1.5
NUMB-220ENST00000556112 LRRC37A3O60309 1634 aa5.7□□□□□ -1.5
NUMB-220ENST00000556112 DLL1O00548 723 aa5.69□□□□□ -1.5
NUMB-220ENST00000556112 CPNE3O75131 537 aaKnown RBP5.69□□□□□ -1.5
NUMB-220ENST00000556112 NEFMP07197 916 aa5.69□□□□□ -1.5
NUMB-220ENST00000556112 PRKAR2BP31323 418 aa5.69□□□□□ -1.5
NUMB-220ENST00000556112 DOC2BQ14184 412 aa5.69□□□□□ -1.5
NUMB-220ENST00000556112 MBTPS1Q14703 1052 aa5.69□□□□□ -1.5
NUMB-220ENST00000556112 NPAS4Q8IUM7 802 aa5.69□□□□□ -1.5
NUMB-220ENST00000556112 GALNT12Q8IXK2 581 aa5.69□□□□□ -1.5
NUMB-220ENST00000556112 PIGBQ92521 554 aa5.69□□□□□ -1.5
NUMB-220ENST00000556112 SMARCC1Q92922 1105 aaPredicted RBP5.69□□□□□ -1.5
NUMB-220ENST00000556112 TMOD3Q9NYL9 352 aa5.69□□□□□ -1.5
NUMB-220ENST00000556112 MYBBP1AQ9BQG0 1328 aaKnown RBP5.69□□□□□ -1.5
NUMB-220ENST00000556112 RGPD2P0DJD1 1756 aa5.68□□□□□ -1.5
NUMB-220ENST00000556112 GNAT3A8MTJ3 354 aa5.68□□□□□ -1.5
NUMB-220ENST00000556112 EIF1AYO14602 144 aaKnown RBP5.68□□□□□ -1.5
NUMB-220ENST00000556112 FSCN2O14926 492 aa5.68□□□□□ -1.5
NUMB-220ENST00000556112 RNMTO43148 476 aaKnown RBP5.68□□□□□ -1.5
NUMB-220ENST00000556112 FMR1Q06787 632 aaKnown RBP eCLIP5.68□□□□□ -1.5
NUMB-220ENST00000556112 R3HDM1Q15032 1099 aaKnown RBP5.68□□□□□ -1.5
NUMB-220ENST00000556112 SLC15A2Q16348 729 aa5.68□□□□□ -1.5
NUMB-220ENST00000556112 GALNT11Q8NCW6 608 aa5.68□□□□□ -1.5
NUMB-220ENST00000556112 RGS22Q8NE09 1264 aa5.68□□□□□ -1.5
NUMB-220ENST00000556112 BSNDQ8WZ55 320 aa5.68□□□□□ -1.5
NUMB-220ENST00000556112 PHACTR3Q96KR7 559 aa5.68□□□□□ -1.5
NUMB-220ENST00000556112 DNAJC25Q9H1X3 360 aa5.68□□□□□ -1.5
NUMB-220ENST00000556112 LGR6Q9HBX8 967 aa5.68□□□□□ -1.5
NUMB-220ENST00000556112 STK32BQ9NY57 414 aa5.68□□□□□ -1.5
NUMB-220ENST00000556112 COL3A1P02461 1466 aaPredicted RBP5.67□□□□□ -1.5
NUMB-220ENST00000556112 A0A1W2PP55 124 aa5.67□□□□□ -1.5
NUMB-220ENST00000556112 H3BRJ5 948 aa5.67□□□□□ -1.5
NUMB-220ENST00000556112 ANP32CO43423 234 aa5.67□□□□□ -1.5
NUMB-220ENST00000556112 P4HBP07237 508 aaKnown RBP5.67□□□□□ -1.5
NUMB-220ENST00000556112 FURINP09958 794 aa5.67□□□□□ -1.5
NUMB-220ENST00000556112 CD68P34810 354 aaPredicted RBP5.67□□□□□ -1.5
NUMB-220ENST00000556112 MAPK8P45983 427 aa5.67□□□□□ -1.5
NUMB-220ENST00000556112 IREB2P48200 963 aaKnown RBP5.67□□□□□ -1.5
NUMB-220ENST00000556112 TXNRD3Q86VQ6 643 aa5.67□□□□□ -1.5
NUMB-220ENST00000556112 KLHL23Q8NBE8 558 aa5.67□□□□□ -1.5
NUMB-220ENST00000556112 WFDC12Q8WWY7 111 aa5.67□□□□□ -1.5
NUMB-220ENST00000556112 SLC7A3Q8WY07 619 aa5.67□□□□□ -1.5
NUMB-220ENST00000556112 CSRNP1Q96S65 589 aa5.67□□□□□ -1.5
NUMB-220ENST00000556112 BHLHE41Q9C0J9 482 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms