RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.26□□□□□ -0.29
CHGA-205ENST00000556098 TEX11Q8IYF3 940 aa13.26□□□□□ -0.29
CHGA-205ENST00000556098 EAF2Q96CJ1 260 aaPredicted RBP13.26□□□□□ -0.29
CHGA-205ENST00000556098 NUDT12Q9BQG2 462 aa13.26□□□□□ -0.29
CHGA-205ENST00000556098 NOL10Q9BSC4 688 aaKnown RBP13.26□□□□□ -0.29
CHGA-205ENST00000556098 OSBPL5Q9H0X9 879 aaPredicted RBP13.26□□□□□ -0.29
CHGA-205ENST00000556098 NDUFB9Q9Y6M9 179 aa13.26□□□□□ -0.29
CHGA-205ENST00000556098 GDF11O95390 407 aa13.25□□□□□ -0.29
CHGA-205ENST00000556098 MYCNP04198 464 aaPredicted RBP13.25□□□□□ -0.29
CHGA-205ENST00000556098 CHMLP26374 656 aa13.25□□□□□ -0.29
CHGA-205ENST00000556098 CCND3P30281 292 aaPredicted RBP13.25□□□□□ -0.29
CHGA-205ENST00000556098 ATN1P54259 1190 aaPredicted RBP13.25□□□□□ -0.29
CHGA-205ENST00000556098 ANAPC15P60006 121 aa13.25□□□□□ -0.29
CHGA-205ENST00000556098 LRRC26Q2I0M4 334 aa13.25□□□□□ -0.29
CHGA-205ENST00000556098 LRRFIP1Q32MZ4 808 aaKnown RBP13.25□□□□□ -0.29
CHGA-205ENST00000556098 LRIT3Q3SXY7 679 aa13.25□□□□□ -0.29
CHGA-205ENST00000556098 RILPL2Q969X0 211 aa13.25□□□□□ -0.29
CHGA-205ENST00000556098 LBHD1Q9BQE6 289 aaPredicted RBP13.25□□□□□ -0.29
CHGA-205ENST00000556098 ESYT1Q9BSJ8 1104 aa13.25□□□□□ -0.29
CHGA-205ENST00000556098 GJD2Q9UKL4 321 aa13.25□□□□□ -0.29
CHGA-205ENST00000556098 A0A1B0GUL7 405 aa13.24□□□□□ -0.29
CHGA-205ENST00000556098 CNGA1P29973 690 aa13.24□□□□□ -0.29
CHGA-205ENST00000556098 CAP2P40123 477 aa13.24□□□□□ -0.29
CHGA-205ENST00000556098 GSTO1P78417 241 aa13.24□□□□□ -0.29
CHGA-205ENST00000556098 CACNB2Q08289 660 aaPredicted RBP13.24□□□□□ -0.29
CHGA-205ENST00000556098 RRP1BQ14684 758 aaKnown RBP13.24□□□□□ -0.29
CHGA-205ENST00000556098 ZYXQ15942 572 aaKnown RBP13.24□□□□□ -0.29
CHGA-205ENST00000556098 CCL14Q16627 93 aa13.24□□□□□ -0.29
CHGA-205ENST00000556098 GPR153Q6NV75 609 aa13.24□□□□□ -0.29
CHGA-205ENST00000556098 PI16Q6UXB8 463 aa13.24□□□□□ -0.29
CHGA-205ENST00000556098 CRACR2BQ8N4Y2 399 aaPredicted RBP13.24□□□□□ -0.29
CHGA-205ENST00000556098 GPRC5AQ8NFJ5 357 aa13.24□□□□□ -0.29
CHGA-205ENST00000556098 SNX21Q969T3 373 aa13.24□□□□□ -0.29
CHGA-205ENST00000556098 XAGE2Q96GT9 111 aa13.24□□□□□ -0.29
CHGA-205ENST00000556098 P2RX7Q99572 595 aaKnown RBP13.24□□□□□ -0.29
CHGA-205ENST00000556098 OGDHLQ9ULD0 1010 aa13.24□□□□□ -0.29
CHGA-205ENST00000556098 NAV1Q8NEY1 1877 aa13.24□□□□□ -0.29
CHGA-205ENST00000556098 PLXNA1Q9UIW2 1896 aa13.23□□□□□ -0.29
CHGA-205ENST00000556098 LDHCP07864 332 aa13.23□□□□□ -0.29
CHGA-205ENST00000556098 RHBDL3P58872 404 aa13.23□□□□□ -0.29
CHGA-205ENST00000556098 HERVK_113P62684 666 aa13.23□□□□□ -0.29
CHGA-205ENST00000556098 TFCP2Q12800 502 aa13.23□□□□□ -0.29
CHGA-205ENST00000556098 RABEP1Q15276 862 aa13.23□□□□□ -0.29
CHGA-205ENST00000556098 SH3RF3Q8TEJ3 882 aaPredicted RBP13.23□□□□□ -0.29
CHGA-205ENST00000556098 SOCS4Q8WXH5 440 aa13.23□□□□□ -0.29
CHGA-205ENST00000556098 IL17RAQ96F46 866 aa13.23□□□□□ -0.29
CHGA-205ENST00000556098 USP26Q9BXU7 913 aa13.23□□□□□ -0.29
CHGA-205ENST00000556098 SENP6Q9GZR1 1112 aaPredicted RBP13.23□□□□□ -0.29
CHGA-205ENST00000556098 GPR75-ASB3A0A0A6YYF3 556 aa13.22□□□□□ -0.29
CHGA-205ENST00000556098 TBC1D12O60347 775 aa13.22□□□□□ -0.29
CHGA-205ENST00000556098 RGS2P41220 211 aa13.22□□□□□ -0.29
CHGA-205ENST00000556098 MAP3K10Q02779 954 aa13.22□□□□□ -0.29
CHGA-205ENST00000556098 SHROOM1Q2M3G4 852 aaPredicted RBP13.22□□□□□ -0.29
CHGA-205ENST00000556098 ZNF697Q5TEC3 545 aa13.22□□□□□ -0.29
CHGA-205ENST00000556098 MAPKAPK5Q8IW41 473 aa13.22□□□□□ -0.29
CHGA-205ENST00000556098 ZNF512BQ96KM6 892 aaPredicted RBP13.22□□□□□ -0.29
CHGA-205ENST00000556098 TBC1D2Q9BYX2 928 aa13.22□□□□□ -0.29
CHGA-205ENST00000556098 TXNRD2Q9NNW7 524 aa13.22□□□□□ -0.29
CHGA-205ENST00000556098 PRDM5Q9NQX1 630 aaPredicted RBP13.22□□□□□ -0.29
CHGA-205ENST00000556098 DIAPH3Q9NSV4 1193 aa13.22□□□□□ -0.29
CHGA-205ENST00000556098 LRP2BPQ9P2M1 347 aa13.22□□□□□ -0.29
CHGA-205ENST00000556098 PRKAG2Q9UGJ0 569 aa13.22□□□□□ -0.29
CHGA-205ENST00000556098 SAP30BPQ9UHR5 308 aaKnown RBP13.22□□□□□ -0.29
CHGA-205ENST00000556098 COL11A1P12107 1806 aaPredicted RBP13.22□□□□□ -0.29
CHGA-205ENST00000556098 LAMA3Q16787 3333 aa13.22□□□□□ -0.29
CHGA-205ENST00000556098 CCDC158Q5M9N0 1113 aa13.21□□□□□ -0.29
CHGA-205ENST00000556098 HSCBQ8IWL3 235 aa13.21□□□□□ -0.29
CHGA-205ENST00000556098 TGFBRAP1Q8WUH2 860 aa13.21□□□□□ -0.29
CHGA-205ENST00000556098 GUCD1Q96NT3 240 aa13.21□□□□□ -0.29
CHGA-205ENST00000556098 FEZ1Q99689 392 aa13.21□□□□□ -0.29
CHGA-205ENST00000556098 HAUS7Q99871 368 aa13.21□□□□□ -0.29
CHGA-205ENST00000556098 PORCNQ9H237 461 aa13.21□□□□□ -0.29
CHGA-205ENST00000556098 SNRKQ9NRH2 765 aa13.21□□□□□ -0.29
CHGA-205ENST00000556098 AATFQ9NY61 560 aaKnown RBP eCLIP13.21□□□□□ -0.29
CHGA-205ENST00000556098 HMG20BQ9P0W2 317 aa13.21□□□□□ -0.29
CHGA-205ENST00000556098 MORF4L1Q9UBU8 362 aa13.21□□□□□ -0.29
CHGA-205ENST00000556098 DBNLQ9UJU6 430 aaKnown RBP13.21□□□□□ -0.29
CHGA-205ENST00000556098 SGSM2O43147 1006 aa13.2□□□□□ -0.3
CHGA-205ENST00000556098 MAPK4P31152 587 aa13.2□□□□□ -0.3
CHGA-205ENST00000556098 ERVK-9P63128 1117 aa13.2□□□□□ -0.3
CHGA-205ENST00000556098 ERVK-24P63145 666 aa13.2□□□□□ -0.3
CHGA-205ENST00000556098 Q3C1V9 767 aa13.2□□□□□ -0.3
CHGA-205ENST00000556098 KIAA1211Q6ZU35 1233 aa13.2□□□□□ -0.3
CHGA-205ENST00000556098 GPR142Q7Z601 462 aa13.2□□□□□ -0.3
CHGA-205ENST00000556098 PLEKHH3Q7Z736 793 aa13.2□□□□□ -0.3
CHGA-205ENST00000556098 SPATA5Q8NB90 893 aa13.2□□□□□ -0.3
CHGA-205ENST00000556098 ZNF384Q8TF68 577 aa13.2□□□□□ -0.3
CHGA-205ENST00000556098 FAM163AQ96GL9 167 aaPredicted RBP13.2□□□□□ -0.3
CHGA-205ENST00000556098 APBA2Q99767 749 aa13.2□□□□□ -0.3
CHGA-205ENST00000556098 CCDC8Q9H0W5 538 aaPredicted RBP13.2□□□□□ -0.3
CHGA-205ENST00000556098 ATP11BQ9Y2G3 1177 aa13.2□□□□□ -0.3
CHGA-205ENST00000556098 COL2A1P02458 1487 aaPredicted RBP13.2□□□□□ -0.3
CHGA-205ENST00000556098 UNC80Q8N2C7 3258 aa13.2□□□□□ -0.3
CHGA-205ENST00000556098 ASNSP08243 561 aa13.19□□□□□ -0.3
CHGA-205ENST00000556098 MCM2P49736 904 aa13.19□□□□□ -0.3
CHGA-205ENST00000556098 BACE1P56817 501 aa13.19□□□□□ -0.3
CHGA-205ENST00000556098 SH3D19Q5HYK7 790 aa13.19□□□□□ -0.3
CHGA-205ENST00000556098 MAP3K21Q5TCX8 1036 aa13.19□□□□□ -0.3
CHGA-205ENST00000556098 TSHZ3Q63HK5 1081 aa13.19□□□□□ -0.3
CHGA-205ENST00000556098 TRMT44Q8IYL2 757 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms