RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 C7orf43Q8WVR3 580 aa9.44□□□□□ -0.9
SUPT16H-204ENST00000555943 KLRG1Q96E93 195 aa9.44□□□□□ -0.9
SUPT16H-204ENST00000555943 PLA2G12BQ9BX93 195 aa9.44□□□□□ -0.9
SUPT16H-204ENST00000555943 BICC1Q9H694 974 aaKnown RBP9.44□□□□□ -0.9
SUPT16H-204ENST00000555943 LTBP3Q9NS15 1303 aa9.44□□□□□ -0.9
SUPT16H-204ENST00000555943 TIAM2Q8IVF5 1701 aa9.44□□□□□ -0.9
SUPT16H-204ENST00000555943 NUP98P52948 1817 aa9.44□□□□□ -0.9
SUPT16H-204ENST00000555943 COL11A2P13942 1736 aaPredicted RBP9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 GLTPD2A6NH11 291 aa9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 ATP4AP20648 1035 aa9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 CTSWP56202 376 aa9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 CCDC152Q4G0S7 254 aa9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 TAF7LQ5H9L4 462 aa9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 COL13A1Q5TAT6 717 aaPredicted RBP9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 LMBR1LQ6UX01 489 aa9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 GLYCTKQ8IVS8 523 aa9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 JMYQ8N9B5 988 aa9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 RPGRQ92834 1020 aaKnown RBP9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 ZNF622Q969S3 477 aaKnown RBP eCLIP9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 MASTLQ96GX5 879 aa9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 KLK14Q9P0G3 267 aa9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 GMPR2Q9P2T1 348 aaKnown RBP9.43□□□□□ -0.9
SUPT16H-204ENST00000555943 A0A1B0GTH6 734 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 SRGAP3O43295 1099 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 SRGNP10124 158 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 VEGFAP15692 232 aaPredicted RBP9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 MSX1P28360 303 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 FOXO4P98177 505 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 ATP8B2P98198 1209 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 IFIT5Q13325 482 aaKnown RBP9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 DGKZQ13574 1117 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 ECM1Q16610 540 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 CCDC57Q2TAC2 916 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 CEP85Q6P2H3 762 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 TTLL11Q8NHH1 800 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 RHPN1Q8TCX5 695 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 TRIM47Q96LD4 638 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 RWDD1Q9H446 243 aaPredicted RBP9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 SENP2Q9HC62 589 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 ANKRD36CQ5JPF3 1778 aa9.42□□□□□ -0.9
SUPT16H-204ENST00000555943 ABCC12Q96J65 1359 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 CACNA1SQ13698 1873 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 ANKRD18BA2A2Z9 1011 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 KLRG2A4D1S0 409 aaPredicted RBP9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 NFKBIEO00221 500 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 RASSF7Q02833 373 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 SF3B3Q15393 1217 aaKnown RBP9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 C11orf91Q3C1V1 193 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 RABL6Q3YEC7 729 aaPredicted RBP9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 FAM26DQ5JW98 314 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 EPHA10Q5JZY3 1008 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 DDX46Q7L014 1031 aaKnown RBP9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 ANKRD44Q8N8A2 993 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 SMC1BQ8NDV3 1235 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 KIFC2Q96AC6 838 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 RBM17Q96I25 401 aaKnown RBP9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 KAZALD1Q96I82 304 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 CCDC136Q96JN2 1154 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 TAOK3Q9H2K8 898 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 RRAGCQ9HB90 399 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 PPP4R2Q9NY27 417 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 STIM2Q9P246 746 aa9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 BIN2Q9UBW5 565 aaPredicted RBP9.41□□□□□ -0.9
SUPT16H-204ENST00000555943 SLX4Q8IY92 1834 aa9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 CSF1RP07333 972 aa9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 NPR1P16066 1061 aa9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 NPR3P17342 541 aa9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 ITGA6P23229 1130 aa9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 MPSTP25325 297 aa9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 ALDH1B1P30837 517 aa9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 IGHMBP2P38935 993 aaKnown RBP9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 HTRA3P83110 453 aa9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 OS9Q13438 667 aaPredicted RBP9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 MTX1Q13505 466 aa9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 CDC5LQ99459 802 aaKnown RBP9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 GREM2Q9H772 168 aa9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 GPAMQ9HCL2 828 aa9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 DYRK1BQ9Y463 629 aa9.4□□□□□ -0.9
SUPT16H-204ENST00000555943 PNMA6EA0A0J9YXQ4 647 aa9.39□□□□□ -0.91
SUPT16H-204ENST00000555943 SURF6O75683 361 aaKnown RBP9.39□□□□□ -0.91
SUPT16H-204ENST00000555943 PRELPP51888 382 aa9.39□□□□□ -0.91
SUPT16H-204ENST00000555943 G3BP1Q13283 466 aaKnown RBP eCLIP9.39□□□□□ -0.91
SUPT16H-204ENST00000555943 HSP90AB4PQ58FF6 505 aa9.39□□□□□ -0.91
SUPT16H-204ENST00000555943 PRPF40BQ6NWY9 871 aaKnown RBP9.39□□□□□ -0.91
SUPT16H-204ENST00000555943 ANKRD18AQ8IVF6 992 aa9.39□□□□□ -0.91
SUPT16H-204ENST00000555943 ZIC5Q96T25 663 aa9.39□□□□□ -0.91
SUPT16H-204ENST00000555943 MPHOSPH8Q99549 860 aa9.39□□□□□ -0.91
SUPT16H-204ENST00000555943 TMX4Q9H1E5 349 aaPredicted RBP9.39□□□□□ -0.91
SUPT16H-204ENST00000555943 RIC1Q4ADV7 1423 aa9.39□□□□□ -0.91
SUPT16H-204ENST00000555943 FAM13AO94988 1023 aa9.38□□□□□ -0.91
SUPT16H-204ENST00000555943 F11P03951 625 aa9.38□□□□□ -0.91
SUPT16H-204ENST00000555943 SNRPBP14678 240 aaKnown RBP9.38□□□□□ -0.91
SUPT16H-204ENST00000555943 BRD2P25440 801 aaKnown RBP9.38□□□□□ -0.91
SUPT16H-204ENST00000555943 MFAP1P55081 439 aaKnown RBP9.38□□□□□ -0.91
SUPT16H-204ENST00000555943 ARHGAP4P98171 946 aa9.38□□□□□ -0.91
SUPT16H-204ENST00000555943 PTSQ03393 145 aa9.38□□□□□ -0.91
SUPT16H-204ENST00000555943 HDAC1Q13547 482 aaPredicted RBP9.38□□□□□ -0.91
SUPT16H-204ENST00000555943 CCDC93Q567U6 631 aa9.38□□□□□ -0.91
SUPT16H-204ENST00000555943 ARSJQ5FYB0 599 aaPredicted RBP9.38□□□□□ -0.91
SUPT16H-204ENST00000555943 LDHAL6AQ6ZMR3 332 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms