RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 RTF1Q92541 710 aaKnown RBP7.38□□□□□ -1.23
NEK9-207ENST00000555763 UIMC1Q96RL1 719 aa7.38□□□□□ -1.23
NEK9-207ENST00000555763 PRDM5Q9NQX1 630 aaPredicted RBP7.38□□□□□ -1.23
NEK9-207ENST00000555763 SLC45A1Q9Y2W3 748 aa7.38□□□□□ -1.23
NEK9-207ENST00000555763 PTPRSQ13332 1948 aa7.38□□□□□ -1.23
NEK9-207ENST00000555763 FRYLO94915 3013 aa7.38□□□□□ -1.23
NEK9-207ENST00000555763 FLNBO75369 2602 aaKnown RBP7.37□□□□□ -1.23
NEK9-207ENST00000555763 ZNFX1Q9P2E3 1918 aaKnown RBP7.37□□□□□ -1.23
NEK9-207ENST00000555763 EP300Q09472 2414 aaPredicted RBP7.37□□□□□ -1.23
NEK9-207ENST00000555763 TRIM43BA6NCK2 446 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 DDX11L8A8MPP1 907 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 F8W031 263 aaPredicted RBP7.37□□□□□ -1.23
NEK9-207ENST00000555763 HTATSF1O43719 755 aaKnown RBP7.37□□□□□ -1.23
NEK9-207ENST00000555763 ATG7O95352 703 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 PRKAR2BP31323 418 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 INPP5BP32019 993 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 KCTD2Q14681 263 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 SH3RF1Q7Z6J0 888 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 PRSS33Q8NF86 280 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 HERVK_113Q902F9 699 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 TRIM43Q96BQ3 446 aaPredicted RBP7.37□□□□□ -1.23
NEK9-207ENST00000555763 CDCA7LQ96GN5 454 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 UCN2Q96RP3 112 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 TRIM34Q9BYJ4 488 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 ALG2Q9H553 416 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 PANK3Q9H999 370 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 COG5Q9UP83 839 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 ATP11BQ9Y2G3 1177 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 DAGLAQ9Y4D2 1042 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 PCDHGA4Q9Y5G9 962 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 COL4A6Q14031 1691 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 ZFYVE26Q68DK2 2539 aa7.37□□□□□ -1.23
NEK9-207ENST00000555763 NAV2Q8IVL1 2488 aa7.36□□□□□ -1.23
NEK9-207ENST00000555763 A0A0G2JLL6 359 aaPredicted RBP7.36□□□□□ -1.23
NEK9-207ENST00000555763 TCP10L2B9ZVM9 353 aa7.36□□□□□ -1.23
NEK9-207ENST00000555763 DNM1LO00429 736 aa7.36□□□□□ -1.23
NEK9-207ENST00000555763 CCND3P30281 292 aaPredicted RBP7.36□□□□□ -1.23
NEK9-207ENST00000555763 TNNI2P48788 182 aa7.36□□□□□ -1.23
NEK9-207ENST00000555763 CACNB2Q08289 660 aaPredicted RBP7.36□□□□□ -1.23
NEK9-207ENST00000555763 CCDC152Q4G0S7 254 aa7.36□□□□□ -1.23
NEK9-207ENST00000555763 PRRT2Q7Z6L0 340 aaPredicted RBP7.36□□□□□ -1.23
NEK9-207ENST00000555763 ANKRD18AQ8IVF6 992 aa7.36□□□□□ -1.23
NEK9-207ENST00000555763 SMCR8Q8TEV9 937 aaPredicted RBP7.36□□□□□ -1.23
NEK9-207ENST00000555763 XAGE3Q8WTP9 111 aa7.36□□□□□ -1.23
NEK9-207ENST00000555763 ANKS1AQ92625 1134 aa7.36□□□□□ -1.23
NEK9-207ENST00000555763 TDRD3Q9H7E2 651 aaKnown RBP7.36□□□□□ -1.23
NEK9-207ENST00000555763 CD209Q9NNX6 404 aa7.36□□□□□ -1.23
NEK9-207ENST00000555763 MINPP1Q9UNW1 487 aa7.36□□□□□ -1.23
NEK9-207ENST00000555763 ATG2AQ2TAZ0 1938 aa7.36□□□□□ -1.23
NEK9-207ENST00000555763 SIP14410 1827 aa7.36□□□□□ -1.23
NEK9-207ENST00000555763 CDK5RAP2Q96SN8 1893 aa7.35□□□□□ -1.23
NEK9-207ENST00000555763 CXCL11O14625 94 aa7.35□□□□□ -1.23
NEK9-207ENST00000555763 U2SURPO15042 1029 aaKnown RBP7.35□□□□□ -1.23
NEK9-207ENST00000555763 ALADP13716 330 aa7.35□□□□□ -1.23
NEK9-207ENST00000555763 RBM5P52756 815 aaKnown RBP eCLIP7.35□□□□□ -1.23
NEK9-207ENST00000555763 PTPN5P54829 565 aa7.35□□□□□ -1.23
NEK9-207ENST00000555763 TRIM60Q495X7 471 aa7.35□□□□□ -1.23
NEK9-207ENST00000555763 ARSIQ5FYB1 569 aa7.35□□□□□ -1.23
NEK9-207ENST00000555763 NOL9Q5SY16 702 aaKnown RBP7.35□□□□□ -1.23
NEK9-207ENST00000555763 RASIP1Q5U651 963 aa7.35□□□□□ -1.23
NEK9-207ENST00000555763 MICALL1Q8N3F8 863 aa7.35□□□□□ -1.23
NEK9-207ENST00000555763 ANKRD13CQ8N6S4 541 aa7.35□□□□□ -1.23
NEK9-207ENST00000555763 PNISRQ8TF01 805 aaKnown RBP7.35□□□□□ -1.23
NEK9-207ENST00000555763 ZDHHC16Q969W1 377 aa7.35□□□□□ -1.23
NEK9-207ENST00000555763 TFIP11Q9UBB9 837 aaKnown RBP7.35□□□□□ -1.23
NEK9-207ENST00000555763 HCSTQ9UBK5 93 aa7.35□□□□□ -1.23
NEK9-207ENST00000555763 GNEQ9Y223 722 aaKnown RBP7.35□□□□□ -1.23
NEK9-207ENST00000555763 LEMD3Q9Y2U8 911 aa7.35□□□□□ -1.23
NEK9-207ENST00000555763 GCN1Q92616 2671 aaKnown RBP7.35□□□□□ -1.23
NEK9-207ENST00000555763 ASH1LQ9NR48 2969 aaKnown RBP7.35□□□□□ -1.23
NEK9-207ENST00000555763 GRXCR1A8MXD5 290 aa7.34□□□□□ -1.23
NEK9-207ENST00000555763 ATP5J2-PTCD1G3V325 749 aa7.34□□□□□ -1.23
NEK9-207ENST00000555763 XRCC5P13010 732 aaKnown RBP7.34□□□□□ -1.23
NEK9-207ENST00000555763 POU3F3P20264 500 aaPredicted RBP7.34□□□□□ -1.23
NEK9-207ENST00000555763 AIMP1Q12904 312 aaKnown RBP7.34□□□□□ -1.23
NEK9-207ENST00000555763 TRIM28Q13263 835 aaKnown RBP7.34□□□□□ -1.23
NEK9-207ENST00000555763 C1orf53Q5VUE5 145 aa7.34□□□□□ -1.23
NEK9-207ENST00000555763 DCAF15Q66K64 600 aa7.34□□□□□ -1.23
NEK9-207ENST00000555763 SLC39A5Q6ZMH5 540 aa7.34□□□□□ -1.23
NEK9-207ENST00000555763 HFE2Q6ZVN8 426 aa7.34□□□□□ -1.23
NEK9-207ENST00000555763 FASTKD5Q7L8L6 764 aaKnown RBP7.34□□□□□ -1.23
NEK9-207ENST00000555763 ZNF341Q9BYN7 854 aa7.34□□□□□ -1.23
NEK9-207ENST00000555763 BSDC1Q9NW68 430 aaPredicted RBP7.34□□□□□ -1.23
NEK9-207ENST00000555763 FAM198AQ9UFP1 575 aa7.34□□□□□ -1.23
NEK9-207ENST00000555763 ZNF112Q9UJU3 913 aa7.34□□□□□ -1.23
NEK9-207ENST00000555763 MYH2Q9UKX2 1941 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 KIAA0355O15063 1070 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 ZKSCAN1P17029 563 aaPredicted RBP7.33□□□□□ -1.24
NEK9-207ENST00000555763 CYP2B6P20813 491 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 FPGSQ05932 587 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 CTDSPL2Q05D32 466 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 FAM83AQ86UY5 434 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 DZIP1LQ8IYY4 767 aaKnown RBP7.33□□□□□ -1.24
NEK9-207ENST00000555763 ZNF454Q8N9F8 522 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 PLBD2Q8NHP8 589 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 PRR7Q8TB68 274 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 SOCS4Q8WXH5 440 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 LPAR1Q92633 364 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 HOOK2Q96ED9 719 aa7.33□□□□□ -1.24
NEK9-207ENST00000555763 CDC5LQ99459 802 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms