RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 CCDC84Q86UT8 332 aaPredicted RBP11.43□□□□□ -0.58
PRKCH-218ENST00000555628 SMCR8Q8TEV9 937 aaPredicted RBP11.43□□□□□ -0.58
PRKCH-218ENST00000555628 COA7Q96BR5 231 aa11.43□□□□□ -0.58
PRKCH-218ENST00000555628 UBE2OQ9C0C9 1292 aaKnown RBP11.43□□□□□ -0.58
PRKCH-218ENST00000555628 SRCIN1Q9C0H9 1055 aa11.43□□□□□ -0.58
PRKCH-218ENST00000555628 DDX4Q9NQI0 724 aaKnown RBP11.43□□□□□ -0.58
PRKCH-218ENST00000555628 C9orf78Q9NZ63 289 aaPredicted RBP11.43□□□□□ -0.58
PRKCH-218ENST00000555628 TRIM75PA6NK02 468 aa11.42□□□□□ -0.58
PRKCH-218ENST00000555628 CTNND1O60716 968 aaKnown RBP11.42□□□□□ -0.58
PRKCH-218ENST00000555628 FRAT2O75474 233 aaPredicted RBP11.42□□□□□ -0.58
PRKCH-218ENST00000555628 LRRC26Q2I0M4 334 aa11.42□□□□□ -0.58
PRKCH-218ENST00000555628 ATG9AQ7Z3C6 839 aa11.42□□□□□ -0.58
PRKCH-218ENST00000555628 HMX1Q9NP08 348 aaPredicted RBP11.42□□□□□ -0.58
PRKCH-218ENST00000555628 PICK1Q9NRD5 415 aa11.42□□□□□ -0.58
PRKCH-218ENST00000555628 USP40Q9NVE5 1235 aa11.42□□□□□ -0.58
PRKCH-218ENST00000555628 MORF4L1Q9UBU8 362 aa11.42□□□□□ -0.58
PRKCH-218ENST00000555628 CHD9Q3L8U1 2897 aa11.42□□□□□ -0.58
PRKCH-218ENST00000555628 GPR37O15354 613 aa11.41□□□□□ -0.58
PRKCH-218ENST00000555628 IFIT1P09914 478 aaKnown RBP11.41□□□□□ -0.58
PRKCH-218ENST00000555628 PROCA1Q8NCQ7 364 aaPredicted RBP11.41□□□□□ -0.58
PRKCH-218ENST00000555628 ZNF384Q8TF68 577 aa11.41□□□□□ -0.58
PRKCH-218ENST00000555628 USP6NLQ92738 828 aa11.41□□□□□ -0.58
PRKCH-218ENST00000555628 PRDM6Q9NQX0 595 aa11.41□□□□□ -0.58
PRKCH-218ENST00000555628 GCLCP48506 637 aaPredicted RBP11.4□□□□□ -0.58
PRKCH-218ENST00000555628 RRP1BQ14684 758 aaKnown RBP11.4□□□□□ -0.58
PRKCH-218ENST00000555628 WDR63Q8IWG1 891 aa11.4□□□□□ -0.58
PRKCH-218ENST00000555628 LPIN2Q92539 896 aa11.4□□□□□ -0.58
PRKCH-218ENST00000555628 BDP1A6H8Y1 2624 aa11.39□□□□□ -0.59
PRKCH-218ENST00000555628 XRCC5P13010 732 aaKnown RBP11.39□□□□□ -0.59
PRKCH-218ENST00000555628 RHBDL3P58872 404 aa11.39□□□□□ -0.59
PRKCH-218ENST00000555628 SH3D19Q5HYK7 790 aa11.39□□□□□ -0.59
PRKCH-218ENST00000555628 ASCC2Q9H1I8 757 aaPredicted RBP11.39□□□□□ -0.59
PRKCH-218ENST00000555628 RLFQ13129 1914 aa11.39□□□□□ -0.59
PRKCH-218ENST00000555628 NCOR1O75376 2440 aa11.38□□□□□ -0.59
PRKCH-218ENST00000555628 XIRP2A4UGR9 3374 aa11.38□□□□□ -0.59
PRKCH-218ENST00000555628 EYA2O00167 538 aa11.38□□□□□ -0.59
PRKCH-218ENST00000555628 PEX10O60683 326 aa11.38□□□□□ -0.59
PRKCH-218ENST00000555628 LDHBP07195 334 aaKnown RBP11.38□□□□□ -0.59
PRKCH-218ENST00000555628 SLC5A1P13866 664 aa11.38□□□□□ -0.59
PRKCH-218ENST00000555628 MDM2Q00987 491 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-218ENST00000555628 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
PRKCH-218ENST00000555628 USP44Q9H0E7 712 aa11.38□□□□□ -0.59
PRKCH-218ENST00000555628 TXNRD2Q9NNW7 524 aa11.38□□□□□ -0.59
PRKCH-218ENST00000555628 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-218ENST00000555628 ADGRG1Q9Y653 693 aa11.38□□□□□ -0.59
PRKCH-218ENST00000555628 REV3LO60673 3130 aa11.38□□□□□ -0.59
PRKCH-218ENST00000555628 CHD7Q9P2D1 2997 aa11.37□□□□□ -0.59
PRKCH-218ENST00000555628 PDS5AQ29RF7 1337 aaKnown RBP11.37□□□□□ -0.59
PRKCH-218ENST00000555628 FAM196BA6NMK8 535 aa11.37□□□□□ -0.59
PRKCH-218ENST00000555628 IGHA2P01877 340 aa11.37□□□□□ -0.59
PRKCH-218ENST00000555628 PHKA1P46020 1223 aa11.37□□□□□ -0.59
PRKCH-218ENST00000555628 CACNB2Q08289 660 aaPredicted RBP11.37□□□□□ -0.59
PRKCH-218ENST00000555628 SPP2Q13103 211 aa11.37□□□□□ -0.59
PRKCH-218ENST00000555628 ZNF280CQ8ND82 737 aa11.37□□□□□ -0.59
PRKCH-218ENST00000555628 LRRFIP2Q9Y608 721 aaKnown RBP11.37□□□□□ -0.59
PRKCH-218ENST00000555628 CCND3P30281 292 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-218ENST00000555628 HMGCS2P54868 508 aa11.36□□□□□ -0.59
PRKCH-218ENST00000555628 MORN1Q5T089 497 aa11.36□□□□□ -0.59
PRKCH-218ENST00000555628 SOCS4Q8WXH5 440 aa11.36□□□□□ -0.59
PRKCH-218ENST00000555628 CDX2Q99626 313 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-218ENST00000555628 OSBPL5Q9H0X9 879 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-218ENST00000555628 CDK5RAP2Q96SN8 1893 aa11.36□□□□□ -0.59
PRKCH-218ENST00000555628 MROH7-TTC4A0A0A0MT08 1334 aa11.35□□□□□ -0.59
PRKCH-218ENST00000555628 FOCADQ5VW36 1801 aa11.35□□□□□ -0.59
PRKCH-218ENST00000555628 GPR75-ASB3A0A0A6YYF3 556 aa11.35□□□□□ -0.59
PRKCH-218ENST00000555628 CIAO1O76071 339 aa11.35□□□□□ -0.59
PRKCH-218ENST00000555628 CYP2B6P20813 491 aa11.35□□□□□ -0.59
PRKCH-218ENST00000555628 HOXA7P31268 230 aaPredicted RBP11.35□□□□□ -0.59
PRKCH-218ENST00000555628 JAG1P78504 1218 aa11.35□□□□□ -0.59
PRKCH-218ENST00000555628 RASGRF1Q13972 1273 aa11.35□□□□□ -0.59
PRKCH-218ENST00000555628 HIC1Q14526 733 aa11.35□□□□□ -0.59
PRKCH-218ENST00000555628 CCL14Q16627 93 aa11.35□□□□□ -0.59
PRKCH-218ENST00000555628 ATP2B3Q16720 1220 aa11.35□□□□□ -0.59
PRKCH-218ENST00000555628 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRKCH-218ENST00000555628 MAFAQ8NHW3 353 aaPredicted RBP11.35□□□□□ -0.59
PRKCH-218ENST00000555628 FAM161BQ96MY7 647 aa11.35□□□□□ -0.59
PRKCH-218ENST00000555628 TBC1D2Q9BYX2 928 aa11.35□□□□□ -0.59
PRKCH-218ENST00000555628 TTYH1Q9H313 450 aaPredicted RBP11.35□□□□□ -0.59
PRKCH-218ENST00000555628 DENND2AQ9ULE3 1009 aa11.35□□□□□ -0.59
PRKCH-218ENST00000555628 ADORA1P30542 326 aa11.34□□□□□ -0.59
PRKCH-218ENST00000555628 CAP2P40123 477 aa11.34□□□□□ -0.59
PRKCH-218ENST00000555628 BTDP43251 543 aa11.34□□□□□ -0.59
PRKCH-218ENST00000555628 GPIHBP1Q8IV16 184 aa11.34□□□□□ -0.59
PRKCH-218ENST00000555628 WDR18Q9BV38 432 aa11.34□□□□□ -0.59
PRKCH-218ENST00000555628 PORCNQ9H237 461 aa11.34□□□□□ -0.59
PRKCH-218ENST00000555628 DNAJC18Q9H819 358 aa11.34□□□□□ -0.59
PRKCH-218ENST00000555628 RBPJLQ9UBG7 517 aa11.34□□□□□ -0.59
PRKCH-218ENST00000555628 ZNF236Q9UL36 1845 aa11.33□□□□□ -0.6
PRKCH-218ENST00000555628 ZKSCAN1P17029 563 aaPredicted RBP11.33□□□□□ -0.6
PRKCH-218ENST00000555628 HERVK_113P62684 666 aa11.33□□□□□ -0.6
PRKCH-218ENST00000555628 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.6
PRKCH-218ENST00000555628 PICALMQ13492 652 aa11.33□□□□□ -0.6
PRKCH-218ENST00000555628 C9orf50Q5SZB4 431 aa11.33□□□□□ -0.6
PRKCH-218ENST00000555628 SWT1Q5T5J6 900 aaKnown RBP11.33□□□□□ -0.6
PRKCH-218ENST00000555628 ZNF697Q5TEC3 545 aa11.33□□□□□ -0.6
PRKCH-218ENST00000555628 CCDC102BQ68D86 513 aa11.33□□□□□ -0.6
PRKCH-218ENST00000555628 METTL16Q86W50 562 aaKnown RBP11.33□□□□□ -0.6
PRKCH-218ENST00000555628 ZSCAN29Q8IWY8 852 aaPredicted RBP11.33□□□□□ -0.6
PRKCH-218ENST00000555628 TRMT44Q8IYL2 757 aaKnown RBP11.33□□□□□ -0.6
PRKCH-218ENST00000555628 P2RX7Q99572 595 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms