RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, human

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACTN1-215	ENST00000555616	USP17L12	C9JPN9	530 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	USP17L21	D6R901	530 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	SDS	P20132	328 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	OSBP	P22059	807 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	RAB3GAP1	Q15042	981 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	GIMAP6	Q6P9H5	292 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	USP17L2	Q6R6M4	530 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	CASC1	Q6TDU7	716 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	C16orf86	Q6ZW13	317 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	AMOTL1	Q8IY63	956 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	RILPL2	Q969X0	211 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	EVI5L	Q96CN4	794 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	DYNLL2	Q96FJ2	89 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	ZNF333	Q96JL9	665 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	FEZ1	Q99689	392 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	FSD1	Q9BTV5	496 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	CABP5	Q9NP86	173 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	EMILIN3	Q9NT22	766 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	MORF4L1	Q9UBU8	362 aa		11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.51	□□□□□ -0.57
ACTN1-215	ENST00000555616	CYP2D7	A0A087X1C5	515 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	GSG1L2	A8MUP6	293 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616		M0R2C6	588 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	GPAA1	O43292	621 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	CDC45	O75419	566 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	FMNL1	O95466	1100 aa	Predicted RBP	11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	GNAT2	P19087	354 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	VCAM1	P19320	739 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	HOXD10	P28358	340 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	USP14	P54578	494 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	IRX3	P78415	501 aa	Predicted RBP	11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	PRKCZ	Q05513	592 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	SEPT2	Q15019	361 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	SLC9C1	Q4G0N8	1177 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	SBK1	Q52WX2	424 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	CTR9	Q6PD62	1173 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	TMEM179	Q6ZVK1	233 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	TICAM2	Q86XR7	235 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	ANKRD13C	Q8N6S4	541 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	ACER1	Q8TDN7	264 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	MYPN	Q86TC9	1320 aa		11.5	□□□□□ -0.57
ACTN1-215	ENST00000555616	SMIM22	K7EJ46	135 aa		11.49	□□□□□ -0.57
ACTN1-215	ENST00000555616	EIF5B	O60841	1220 aa	Known RBP	11.49	□□□□□ -0.57
ACTN1-215	ENST00000555616	CDK8	P49336	464 aa		11.49	□□□□□ -0.57
ACTN1-215	ENST00000555616	HERVK_113	P62684	666 aa		11.49	□□□□□ -0.57
ACTN1-215	ENST00000555616	ZMYM1	Q5SVZ6	1142 aa		11.49	□□□□□ -0.57
ACTN1-215	ENST00000555616	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.49	□□□□□ -0.57
ACTN1-215	ENST00000555616	CCDC17	Q96LX7	622 aa		11.49	□□□□□ -0.57
ACTN1-215	ENST00000555616	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.48	□□□□□ -0.57
ACTN1-215	ENST00000555616	CENPF	P49454	3210 aa		11.48	□□□□□ -0.57
ACTN1-215	ENST00000555616		A0A1W2PRG0	241 aa		11.48	□□□□□ -0.57
ACTN1-215	ENST00000555616	HIP1	O00291	1037 aa		11.48	□□□□□ -0.57
ACTN1-215	ENST00000555616	MPHOSPH10	O00566	681 aa	Known RBP	11.48	□□□□□ -0.57
ACTN1-215	ENST00000555616	TNPO2	O14787	897 aa	Known RBP	11.48	□□□□□ -0.57
ACTN1-215	ENST00000555616	ECM2	O94769	699 aa	Predicted RBP	11.48	□□□□□ -0.57
ACTN1-215	ENST00000555616	AKR1B1	P15121	316 aa		11.48	□□□□□ -0.57
ACTN1-215	ENST00000555616	ICA1	Q05084	483 aa		11.48	□□□□□ -0.57
ACTN1-215	ENST00000555616	ZYX	Q15942	572 aa	Known RBP	11.48	□□□□□ -0.57
ACTN1-215	ENST00000555616	NBPF11	Q86T75	865 aa		11.48	□□□□□ -0.57
ACTN1-215	ENST00000555616	P2RX7	Q99572	595 aa	Known RBP	11.48	□□□□□ -0.57
ACTN1-215	ENST00000555616	GREB1L	Q9C091	1923 aa	Predicted RBP	11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	USP17L15	C9J2P7	530 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	USP17L13	C9JLJ4	530 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	USP17L11	C9JVI0	530 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	USP17L18	D6R9N7	530 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	USP17L22	D6RA61	530 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	USP17L17	D6RBQ6	530 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	USP17L19	D6RCP7	530 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	USP17L20	D6RJB6	530 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	USP17L24	Q0WX57	530 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	IRF5	Q13568	498 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	POTEE	Q6S8J3	1075 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	LBX2	Q6XYB7	198 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	CLEC10A	Q8IUN9	316 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	RAET1E	Q8TD07	263 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	SH3TC2	Q8TF17	1288 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	SEC62	Q99442	399 aa	Known RBP	11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	SH2D4A	Q9H788	454 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	TXNRD2	Q9NNW7	524 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	TSHZ2	Q9NRE2	1034 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	DIAPH3	Q9NSV4	1193 aa		11.47	□□□□□ -0.57
ACTN1-215	ENST00000555616	MGAM	O43451	1857 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616		A0A0G2JMZ2	1700 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	POTEF	A5A3E0	1075 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	FOXP2	O15409	715 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	RASA1	P20936	1047 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	GRK4	P32298	578 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	TDO2	P48775	406 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	FLT3LG	P49771	235 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	CATSPERG	Q6ZRH7	1159 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	SIAH1	Q8IUQ4	282 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	SLAIN1	Q8ND83	568 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	GPRC5A	Q8NFJ5	357 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	LPAR1	Q92633	364 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	COA7	Q96BR5	231 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	NACAP1	Q9BZK3	213 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	ARHGEF10L	Q9HCE6	1279 aa		11.46	□□□□□ -0.57

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