RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 SMC4Q9NTJ3 1288 aa10.32□□□□□ -0.76
NEK9-206ENST00000555537 NOB1Q9ULX3 412 aaKnown RBP10.32□□□□□ -0.76
NEK9-206ENST00000555537 FRMPD3Q5JV73 1810 aa10.32□□□□□ -0.76
NEK9-206ENST00000555537 FLT1P17948 1338 aa10.32□□□□□ -0.76
NEK9-206ENST00000555537 MAST2Q6P0Q8 1798 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 CDH23Q9H251 3354 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 USP17L15C9J2P7 530 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 USP17L13C9JLJ4 530 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 USP17L11C9JVI0 530 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 USP17L18D6R9N7 530 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 USP17L22D6RA61 530 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 USP17L17D6RBQ6 530 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 USP17L19D6RCP7 530 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 USP17L20D6RJB6 530 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 GLRX3O76003 335 aaKnown RBP10.31□□□□□ -0.76
NEK9-206ENST00000555537 ADCYAP1R1P41586 468 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 EPHB4P54760 987 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 DYNLL1P63167 89 aaKnown RBP10.31□□□□□ -0.76
NEK9-206ENST00000555537 CCNA1P78396 465 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 SMAD3P84022 425 aaKnown RBP10.31□□□□□ -0.76
NEK9-206ENST00000555537 USP17L24Q0WX57 530 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 CATSPERGQ6ZRH7 1159 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 USP38Q8NB14 1042 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 ARRDC4Q8NCT1 418 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 ACER1Q8TDN7 264 aa10.31□□□□□ -0.76
NEK9-206ENST00000555537 GTF3C2Q8WUA4 911 aaPredicted RBP10.31□□□□□ -0.76
NEK9-206ENST00000555537 SYMPKQ92797 1274 aaKnown RBP10.31□□□□□ -0.76
NEK9-206ENST00000555537 LTBP2Q14767 1821 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 ANP32CO43423 234 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 MSCO60682 206 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 BAG3O95817 575 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 HOXC6P09630 235 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 CYBAP13498 195 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 ARID4AP29374 1257 aaPredicted RBP10.3□□□□□ -0.76
NEK9-206ENST00000555537 PPP4CP60510 307 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 GRB14Q14449 540 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 GRIN2CQ14957 1233 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 RAB3GAP1Q15042 981 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 DPP9Q86TI2 863 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 CDCA7LQ96GN5 454 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 FEZ1Q99689 392 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 PDLIM7Q9NR12 457 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 IVNS1ABPQ9Y6Y0 642 aa10.3□□□□□ -0.76
NEK9-206ENST00000555537 KBTBD13C9JR72 458 aa10.29□□□□□ -0.76
NEK9-206ENST00000555537 COBLO75128 1261 aa10.29□□□□□ -0.76
NEK9-206ENST00000555537 IGHA2P01877 340 aa10.29□□□□□ -0.76
NEK9-206ENST00000555537 TLE2Q04725 743 aa10.29□□□□□ -0.76
NEK9-206ENST00000555537 SLFN5Q08AF3 891 aa10.29□□□□□ -0.76
NEK9-206ENST00000555537 ALDH1L2Q3SY69 923 aa10.29□□□□□ -0.76
NEK9-206ENST00000555537 PPM1EQ8WY54 764 aa10.29□□□□□ -0.76
NEK9-206ENST00000555537 C12orf42Q96LP6 360 aa10.29□□□□□ -0.76
NEK9-206ENST00000555537 GINM1Q9NU53 330 aa10.29□□□□□ -0.76
NEK9-206ENST00000555537 SPDYE16A6NNV3 312 aaPredicted RBP10.28□□□□□ -0.76
NEK9-206ENST00000555537 E9PSI1 815 aa10.28□□□□□ -0.76
NEK9-206ENST00000555537 TNFRSF10AO00220 468 aa10.28□□□□□ -0.76
NEK9-206ENST00000555537 CYP2E1P05181 493 aaPredicted RBP10.28□□□□□ -0.76
NEK9-206ENST00000555537 HLA-DOAP06340 250 aa10.28□□□□□ -0.76
NEK9-206ENST00000555537 UQCRFS1P1P0C7P4 283 aa10.28□□□□□ -0.76
NEK9-206ENST00000555537 PLCG2P16885 1265 aa10.28□□□□□ -0.76
NEK9-206ENST00000555537 VCAM1P19320 739 aa10.28□□□□□ -0.76
NEK9-206ENST00000555537 ADORA2AP29274 412 aa10.28□□□□□ -0.76
NEK9-206ENST00000555537 SNX17Q15036 470 aa10.28□□□□□ -0.76
NEK9-206ENST00000555537 LRRC41Q15345 812 aa10.28□□□□□ -0.76
NEK9-206ENST00000555537 TJAP1Q5JTD0 557 aa10.28□□□□□ -0.76
NEK9-206ENST00000555537 MIGA1Q8NAN2 632 aa10.28□□□□□ -0.76
NEK9-206ENST00000555537 RNPC3Q96LT9 517 aaKnown RBP10.28□□□□□ -0.76
NEK9-206ENST00000555537 MOV10L1Q9BXT6 1211 aaKnown RBP10.28□□□□□ -0.76
NEK9-206ENST00000555537 RPAP3Q9H6T3 665 aaPredicted RBP10.28□□□□□ -0.76
NEK9-206ENST00000555537 HDAC5Q9UQL6 1122 aa10.28□□□□□ -0.76
NEK9-206ENST00000555537 RLFQ13129 1914 aa10.28□□□□□ -0.76
NEK9-206ENST00000555537 PNMA6EA0A0J9YXQ4 647 aa10.27□□□□□ -0.77
NEK9-206ENST00000555537 SEPT4O43236 478 aa10.27□□□□□ -0.77
NEK9-206ENST00000555537 CYP7A1P22680 504 aa10.27□□□□□ -0.77
NEK9-206ENST00000555537 ZAP70P43403 619 aa10.27□□□□□ -0.77
NEK9-206ENST00000555537 G3BP1Q13283 466 aaKnown RBP eCLIP10.27□□□□□ -0.77
NEK9-206ENST00000555537 CERKLQ49MI3 558 aaPredicted RBP10.27□□□□□ -0.77
NEK9-206ENST00000555537 FAM47AQ5JRC9 791 aa10.27□□□□□ -0.77
NEK9-206ENST00000555537 TTC39AQ5SRH9 613 aa10.27□□□□□ -0.77
NEK9-206ENST00000555537 TATDN1Q6P1N9 297 aa10.27□□□□□ -0.77
NEK9-206ENST00000555537 DBNDD2Q9BQY9 259 aa10.27□□□□□ -0.77
NEK9-206ENST00000555537 PIH1D3Q9NQM4 214 aaKnown RBP10.27□□□□□ -0.77
NEK9-206ENST00000555537 CDK5RAP2Q96SN8 1893 aa10.26□□□□□ -0.77
NEK9-206ENST00000555537 ERCC3P19447 782 aa10.26□□□□□ -0.77
NEK9-206ENST00000555537 GUCY1A2P33402 732 aa10.26□□□□□ -0.77
NEK9-206ENST00000555537 USP5P45974 858 aa10.26□□□□□ -0.77
NEK9-206ENST00000555537 PLCD1P51178 756 aa10.26□□□□□ -0.77
NEK9-206ENST00000555537 USP14P54578 494 aa10.26□□□□□ -0.77
NEK9-206ENST00000555537 ABCB5Q2M3G0 1257 aa10.26□□□□□ -0.77
NEK9-206ENST00000555537 OLFML2BQ68BL8 750 aa10.26□□□□□ -0.77
NEK9-206ENST00000555537 ATF7IPQ6VMQ6 1270 aa10.26□□□□□ -0.77
NEK9-206ENST00000555537 LBX2Q6XYB7 198 aa10.26□□□□□ -0.77
NEK9-206ENST00000555537 API5Q9BZZ5 524 aaKnown RBP10.26□□□□□ -0.77
NEK9-206ENST00000555537 KIAA1683Q9H0B3 1180 aa10.26□□□□□ -0.77
NEK9-206ENST00000555537 ZNF576Q9H609 170 aa10.26□□□□□ -0.77
NEK9-206ENST00000555537 TACC3Q9Y6A5 838 aa10.26□□□□□ -0.77
NEK9-206ENST00000555537 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.25□□□□□ -0.77
NEK9-206ENST00000555537 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.25□□□□□ -0.77
NEK9-206ENST00000555537 A0A1W2PRG0 241 aa10.25□□□□□ -0.77
NEK9-206ENST00000555537 GRXCR1A8MXD5 290 aa10.25□□□□□ -0.77
NEK9-206ENST00000555537 STRNO43815 780 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms