RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 ACBD3Q9H3P7 528 aa10.03□□□□□ -0.8
SYNE2-217ENST00000555022 SLC24A3Q9HC58 644 aa10.03□□□□□ -0.8
SYNE2-217ENST00000555022 NDUFAB1O14561 156 aa10.03□□□□□ -0.8
SYNE2-217ENST00000555022 HDGFP51858 240 aaKnown RBP10.03□□□□□ -0.8
SYNE2-217ENST00000555022 E2F5Q15329 346 aa10.03□□□□□ -0.8
SYNE2-217ENST00000555022 ATL3Q6DD88 541 aa10.03□□□□□ -0.8
SYNE2-217ENST00000555022 NOSTRINQ8IVI9 506 aa10.03□□□□□ -0.8
SYNE2-217ENST00000555022 RAPGEF4Q8WZA2 1011 aa10.03□□□□□ -0.8
SYNE2-217ENST00000555022 IP6K1Q92551 441 aa10.03□□□□□ -0.8
SYNE2-217ENST00000555022 SYMPKQ92797 1274 aaKnown RBP10.03□□□□□ -0.8
SYNE2-217ENST00000555022 NCAPGQ9BPX3 1015 aa10.03□□□□□ -0.8
SYNE2-217ENST00000555022 ARMT1Q9H993 441 aa10.03□□□□□ -0.8
SYNE2-217ENST00000555022 SH3TC1Q8TE82 1336 aa10.03□□□□□ -0.8
SYNE2-217ENST00000555022 IDEP14735 1019 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 SCP2P22307 547 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 HNRNPH1P31943 449 aaKnown RBP10.02□□□□□ -0.81
SYNE2-217ENST00000555022 MAP2K2P36507 400 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 SEC24CP53992 1094 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 ANKRD20A12PQ8NF67 263 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 ORAI2Q96SN7 254 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 RUFY1Q96T51 708 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 BCCIPQ9P287 314 aaKnown RBP eCLIP10.02□□□□□ -0.81
SYNE2-217ENST00000555022 WWC3Q9ULE0 1092 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 PHF8Q9UPP1 1060 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 SLC4A4Q9Y6R1 1079 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 PXDNLA1KZ92 1463 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 KCNJ6P48051 423 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 PLCD1P51178 756 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 EIF5P55010 431 aaKnown RBP10.02□□□□□ -0.81
SYNE2-217ENST00000555022 GUCY1A3Q02108 690 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 METTL24Q5JXM2 366 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 TMC4Q7Z404 712 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 ANKRD18AQ8IVF6 992 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 BANK1Q8NDB2 785 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 JAKMIP2Q96AA8 810 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 LACRTQ9GZZ8 138 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 MLXIPQ9HAP2 919 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 EID1Q9Y6B2 187 aa10.02□□□□□ -0.81
SYNE2-217ENST00000555022 RCCD1A6NED2 376 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 KRT14P02533 472 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 ZNF18P17022 549 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 ARHGAP25P42331 645 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 CCDC57Q2TAC2 916 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 MCTP2Q6DN12 878 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 MMS22LQ6ZRQ5 1243 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 FCHSD1Q86WN1 690 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 DMGDHQ9UI17 866 aaKnown RBP10.01□□□□□ -0.81
SYNE2-217ENST00000555022 HGSO14964 777 aaPredicted RBP10.01□□□□□ -0.81
SYNE2-217ENST00000555022 PLEKP08567 350 aaPredicted RBP10.01□□□□□ -0.81
SYNE2-217ENST00000555022 MCM7P33993 719 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 IRAK1P51617 712 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 SCLT1Q96NL6 688 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 CXorf56Q9H5V9 222 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 CYP2D7A0A087X1C5 515 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 SHTN1A0MZ66 631 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 SKAP2O75563 359 aaPredicted RBP10.01□□□□□ -0.81
SYNE2-217ENST00000555022 MORC3Q14149 939 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 CCDC96Q2M329 555 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 KCNV1Q6PIU1 500 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 MLKLQ8NB16 471 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 UBAC1Q9BSL1 405 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 CAPS2Q9BXY5 557 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 ABHD10Q9NUJ1 306 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 FBXO2Q9UK22 296 aaPredicted RBP10.01□□□□□ -0.81
SYNE2-217ENST00000555022 C3P01024 1663 aa10.01□□□□□ -0.81
SYNE2-217ENST00000555022 CEMIPQ8WUJ3 1361 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 ZMYM6O95789 1325 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 CDHR2Q9BYE9 1310 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 TTC26A0AVF1 554 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 PP2D1A8MPX8 630 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 EYA2O00167 538 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 TUBB4AP04350 444 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 CUL4BQ13620 913 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 DNAAF5Q86Y56 855 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 KSR1Q8IVT5 923 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 MSANTD4Q8NCY6 345 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 ENOX1Q8TC92 643 aaKnown RBP10□□□□□ -0.81
SYNE2-217ENST00000555022 HPS3Q969F9 1004 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 PIH1D3Q9NQM4 214 aaKnown RBP10□□□□□ -0.81
SYNE2-217ENST00000555022 EPB41L3Q9Y2J2 1087 aaPredicted RBP10□□□□□ -0.81
SYNE2-217ENST00000555022 REXO2Q9Y3B8 237 aaKnown RBP10□□□□□ -0.81
SYNE2-217ENST00000555022 EPN1Q9Y6I3 576 aaPredicted RBP10□□□□□ -0.81
SYNE2-217ENST00000555022 NEO1Q92859 1461 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 ZNF532Q9HCE3 1301 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 A0A1B0GTH6 734 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 NKRFO15226 690 aaKnown RBP eCLIP10□□□□□ -0.81
SYNE2-217ENST00000555022 KIAA0754O94854 1291 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 RPSAP08865 295 aaKnown RBP10□□□□□ -0.81
SYNE2-217ENST00000555022 RASGRP4Q8TDF6 673 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 COG1Q8WTW3 980 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 MS4A14Q96JA4 679 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 LRRC1Q9BTT6 524 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 GBP3Q9H0R5 595 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 PPANQ9NQ55 473 aaKnown RBP10□□□□□ -0.81
SYNE2-217ENST00000555022 PSD3Q9NYI0 1048 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 ADD3Q9UEY8 706 aaKnown RBP10□□□□□ -0.81
SYNE2-217ENST00000555022 MKRN1Q9UHC7 482 aaKnown RBP10□□□□□ -0.81
SYNE2-217ENST00000555022 SAR1BQ9Y6B6 198 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 ITSN1Q15811 1721 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 B4DLN1 442 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms