RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 SHROOM1Q2M3G4 852 aaPredicted RBP12.01□□□□□ -0.49
SYNE2-215ENST00000554997 ERO1BQ86YB8 467 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 TMTC2Q8N394 836 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 FBXL16Q8N461 479 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 IGDCC4Q8TDY8 1250 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 HHIPL1Q96JK4 782 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 TMEM87BQ96K49 555 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 WDR18Q9BV38 432 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 TBC1D2Q9BYX2 928 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 ALDH8A1Q9H2A2 487 aaPredicted RBP12.01□□□□□ -0.49
SYNE2-215ENST00000554997 NYAP2Q9P242 653 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 CYP46A1Q9Y6A2 500 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 SNCAIPQ9Y6H5 919 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 TLL2Q9Y6L7 1015 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 ZHX2Q9Y6X8 837 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 NAV1Q8NEY1 1877 aa12.01□□□□□ -0.49
SYNE2-215ENST00000554997 BAZ2AQ9UIF9 1905 aaKnown RBP12.01□□□□□ -0.49
SYNE2-215ENST00000554997 NMT2O60551 498 aa12□□□□□ -0.49
SYNE2-215ENST00000554997 HUNKP57058 714 aa12□□□□□ -0.49
SYNE2-215ENST00000554997 COL9A3Q14050 684 aaPredicted RBP12□□□□□ -0.49
SYNE2-215ENST00000554997 SART3Q15020 963 aaKnown RBP12□□□□□ -0.49
SYNE2-215ENST00000554997 CHST3Q7LGC8 479 aa12□□□□□ -0.49
SYNE2-215ENST00000554997 CEP95Q96GE4 821 aa12□□□□□ -0.49
SYNE2-215ENST00000554997 CLMNQ96JQ2 1002 aa12□□□□□ -0.49
SYNE2-215ENST00000554997 ZKSCAN3Q9BRR0 538 aa12□□□□□ -0.49
SYNE2-215ENST00000554997 UBAC1Q9BSL1 405 aa12□□□□□ -0.49
SYNE2-215ENST00000554997 AS3MTQ9HBK9 375 aa12□□□□□ -0.49
SYNE2-215ENST00000554997 CLIP2Q9UDT6 1046 aa12□□□□□ -0.49
SYNE2-215ENST00000554997 AFG3L2Q9Y4W6 797 aa12□□□□□ -0.49
SYNE2-215ENST00000554997 PLIN4Q96Q06 1357 aa12□□□□□ -0.49
SYNE2-215ENST00000554997 ERICH2A1L162 156 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 SPDYE5A6NIY4 337 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 IFIT3O14879 490 aaKnown RBP11.99□□□□□ -0.49
SYNE2-215ENST00000554997 TTLL1O95922 423 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 EEF2P13639 858 aaKnown RBP11.99□□□□□ -0.49
SYNE2-215ENST00000554997 CPA1P15085 419 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 LIFRP42702 1097 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 SEC23AQ15436 765 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 RCSD1Q6JBY9 416 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 RGMBQ6NW40 437 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 ZNF280CQ8ND82 737 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 ELP3Q9H9T3 547 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 PDRG1Q9NUG6 133 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 SYNPO2Q9UMS6 1093 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 TMX2Q9Y320 296 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 SIPA1L1O43166 1804 aa11.99□□□□□ -0.49
SYNE2-215ENST00000554997 TNKSO95271 1327 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 A0A1W2PRG0 241 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 C19orf81C9J6K1 198 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 CXCL11O14625 94 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 TOP1P11387 765 aaKnown RBP11.98□□□□□ -0.49
SYNE2-215ENST00000554997 NEK4P51957 841 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 ICA1Q05084 483 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 SPP2Q13103 211 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 WTAPQ15007 396 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 RABEP1Q15276 862 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 TMEM67Q5HYA8 995 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 ENAHQ8N8S7 591 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-215ENST00000554997 CCDC102AQ96A19 550 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 TMEM47Q9BQJ4 181 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 AGXT2Q9BYV1 514 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 UPF3BQ9BZI7 483 aaKnown RBP11.98□□□□□ -0.49
SYNE2-215ENST00000554997 ARHGEF10LQ9HCE6 1279 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-215ENST00000554997 ABT1Q9ULW3 272 aaKnown RBP11.98□□□□□ -0.49
SYNE2-215ENST00000554997 STX8Q9UNK0 236 aa11.98□□□□□ -0.49
SYNE2-215ENST00000554997 USP17L10C9JJH3 530 aa11.97□□□□□ -0.49
SYNE2-215ENST00000554997 SH2B2O14492 632 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-215ENST00000554997 ZBTB48P10074 688 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-215ENST00000554997 ZNF157P51786 506 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-215ENST00000554997 BACE1P56817 501 aa11.97□□□□□ -0.49
SYNE2-215ENST00000554997 FGD1P98174 961 aa11.97□□□□□ -0.49
SYNE2-215ENST00000554997 PPIL2Q13356 520 aa11.97□□□□□ -0.49
SYNE2-215ENST00000554997 DEFB115Q30KQ5 88 aa11.97□□□□□ -0.49
SYNE2-215ENST00000554997 IFIT1BQ5T764 474 aaKnown RBP11.97□□□□□ -0.49
SYNE2-215ENST00000554997 Q6ZUG5 572 aa11.97□□□□□ -0.49
SYNE2-215ENST00000554997 ACER1Q8TDN7 264 aa11.97□□□□□ -0.49
SYNE2-215ENST00000554997 OPTNQ96CV9 577 aa11.97□□□□□ -0.49
SYNE2-215ENST00000554997 TCEANC2Q96MN5 208 aa11.97□□□□□ -0.49
SYNE2-215ENST00000554997 KIAA1683Q9H0B3 1180 aa11.97□□□□□ -0.49
SYNE2-215ENST00000554997 SH2D4AQ9H788 454 aa11.97□□□□□ -0.49
SYNE2-215ENST00000554997 LY9Q9HBG7 655 aa11.97□□□□□ -0.49
SYNE2-215ENST00000554997 KCNH4Q9UQ05 1017 aa11.97□□□□□ -0.49
SYNE2-215ENST00000554997 F5H6K3 240 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 IRF6O14896 467 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 ECE1P42892 770 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 USP14P54578 494 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 EVCP57679 992 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 ATP2B2Q01814 1243 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 KLRC3Q07444 240 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 ANKRD1Q15327 319 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 SH3D19Q5HYK7 790 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 SPRYD7Q5W111 196 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 CCDC84Q86UT8 332 aaPredicted RBP11.96□□□□□ -0.49
SYNE2-215ENST00000554997 SGMS1Q86VZ5 419 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 GMCL1P1Q8NEA9 526 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 OTUD5Q96G74 571 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 WNK4Q96J92 1243 aa11.96□□□□□ -0.49
SYNE2-215ENST00000554997 LRRC2Q9BYS8 371 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms