RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 NEK11Q8NG66 645 aa15.28■□□□□ 0.04
SIX1-203ENST00000554986 ZNF526Q8TF50 670 aaPredicted RBP15.28■□□□□ 0.04
SIX1-203ENST00000554986 DPF2Q92785 391 aa15.28■□□□□ 0.04
SIX1-203ENST00000554986 LLPHQ9BRT6 129 aaKnown RBP15.28■□□□□ 0.04
SIX1-203ENST00000554986 GPRC5DQ9NZD1 345 aa15.28■□□□□ 0.04
SIX1-203ENST00000554986 TTF2Q9UNY4 1162 aaKnown RBP15.28■□□□□ 0.04
SIX1-203ENST00000554986 MAST2Q6P0Q8 1798 aa15.28■□□□□ 0.04
SIX1-203ENST00000554986 MYH7P12883 1935 aa15.28■□□□□ 0.04
SIX1-203ENST00000554986 TBC1D8O95759 1140 aa15.27■□□□□ 0.04
SIX1-203ENST00000554986 KRBA2Q6ZNG9 492 aa15.27■□□□□ 0.04
SIX1-203ENST00000554986 MSL3Q8N5Y2 521 aaKnown RBP15.27■□□□□ 0.04
SIX1-203ENST00000554986 AOPEPQ8N6M6 819 aa15.27■□□□□ 0.04
SIX1-203ENST00000554986 GPR161Q8N6U8 529 aaKnown RBP15.27■□□□□ 0.04
SIX1-203ENST00000554986 BRF1Q92994 677 aa15.27■□□□□ 0.04
SIX1-203ENST00000554986 SMARCE1Q969G3 411 aa15.27■□□□□ 0.04
SIX1-203ENST00000554986 LRP2BPQ9P2M1 347 aa15.27■□□□□ 0.04
SIX1-203ENST00000554986 CNOT7Q9UIV1 285 aaKnown RBP15.27■□□□□ 0.04
SIX1-203ENST00000554986 PCDHAC2Q9Y5I4 1007 aa15.27■□□□□ 0.04
SIX1-203ENST00000554986 MYH2Q9UKX2 1941 aa15.27■□□□□ 0.04
SIX1-203ENST00000554986 IDH1O75874 414 aaKnown RBP15.27■□□□□ 0.03
SIX1-203ENST00000554986 EGFRP00533 1210 aa15.27■□□□□ 0.03
SIX1-203ENST00000554986 CHGBP05060 677 aa15.27■□□□□ 0.03
SIX1-203ENST00000554986 USP17L8P0C7I0 530 aa15.27■□□□□ 0.03
SIX1-203ENST00000554986 NOP2P46087 812 aaKnown RBP15.27■□□□□ 0.03
SIX1-203ENST00000554986 MECOMQ03112 1051 aa15.27■□□□□ 0.03
SIX1-203ENST00000554986 DIXDC1Q155Q3 683 aa15.27■□□□□ 0.03
SIX1-203ENST00000554986 MNS1Q8NEH6 495 aa15.27■□□□□ 0.03
SIX1-203ENST00000554986 SMARCC2Q8TAQ2 1214 aa15.27■□□□□ 0.03
SIX1-203ENST00000554986 RAI14Q9P0K7 980 aa15.27■□□□□ 0.03
SIX1-203ENST00000554986 SUGT1Q9Y2Z0 365 aa15.27■□□□□ 0.03
SIX1-203ENST00000554986 SCN4AP35499 1836 aa15.27■□□□□ 0.03
SIX1-203ENST00000554986 MYO1CO00159 1063 aa15.26■□□□□ 0.03
SIX1-203ENST00000554986 OAS2P29728 719 aaKnown RBP15.26■□□□□ 0.03
SIX1-203ENST00000554986 CASQ1P31415 396 aa15.26■□□□□ 0.03
SIX1-203ENST00000554986 TTF1Q15361 905 aaPredicted RBP15.26■□□□□ 0.03
SIX1-203ENST00000554986 JAKMIP3Q5VZ66 844 aa15.26■□□□□ 0.03
SIX1-203ENST00000554986 CC2D1AQ6P1N0 951 aaPredicted RBP15.26■□□□□ 0.03
SIX1-203ENST00000554986 TRIM65Q6PJ69 517 aa15.26■□□□□ 0.03
SIX1-203ENST00000554986 NSUN4Q96CB9 384 aaKnown RBP15.26■□□□□ 0.03
SIX1-203ENST00000554986 GOLPH3LQ9H4A5 285 aa15.26■□□□□ 0.03
SIX1-203ENST00000554986 H3BQV1 296 aa15.25■□□□□ 0.03
SIX1-203ENST00000554986 ZNF280AP59817 542 aaPredicted RBP15.25■□□□□ 0.03
SIX1-203ENST00000554986 SMC1AQ14683 1233 aaKnown RBP15.25■□□□□ 0.03
SIX1-203ENST00000554986 IFFO2Q5TF58 517 aa15.25■□□□□ 0.03
SIX1-203ENST00000554986 SPTY2D1Q68D10 685 aaPredicted RBP15.25■□□□□ 0.03
SIX1-203ENST00000554986 SAMD7Q7Z3H4 446 aa15.25■□□□□ 0.03
SIX1-203ENST00000554986 ZNF396Q96N95 335 aaPredicted RBP15.25■□□□□ 0.03
SIX1-203ENST00000554986 NMRK2Q9NPI5 230 aa15.25■□□□□ 0.03
SIX1-203ENST00000554986 DTNBO60941 627 aa15.25■□□□□ 0.03
SIX1-203ENST00000554986 TNNT3P45378 269 aaPredicted RBP15.25■□□□□ 0.03
SIX1-203ENST00000554986 DZIP1Q86YF9 867 aaKnown RBP15.25■□□□□ 0.03
SIX1-203ENST00000554986 KBTBD3Q8NAB2 608 aa15.25■□□□□ 0.03
SIX1-203ENST00000554986 TMX1Q9H3N1 280 aa15.25■□□□□ 0.03
SIX1-203ENST00000554986 RSPH14Q9UHP6 348 aa15.25■□□□□ 0.03
SIX1-203ENST00000554986 A0A1W2PQ27 194 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 A0A1W2PQ64 194 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 A0A1W2PQD8 194 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 POLR3GO15318 223 aaPredicted RBP15.24■□□□□ 0.03
SIX1-203ENST00000554986 RPS6KA5O75582 802 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 NMIQ13287 307 aaPredicted RBP15.24■□□□□ 0.03
SIX1-203ENST00000554986 ADGRA1Q86SQ6 560 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 SRLQ86TD4 932 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 REXO1L1PQ8IX06 675 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 TRPM4Q8TD43 1214 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 XPO4Q9C0E2 1151 aaKnown RBP15.24■□□□□ 0.03
SIX1-203ENST00000554986 RRAGCQ9HB90 399 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 MYOZ2Q9NPC6 264 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 SASH3O75995 380 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 YY1P25490 414 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 LMOD1P29536 600 aaPredicted RBP15.24■□□□□ 0.03
SIX1-203ENST00000554986 CRKP46108 304 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 MAP3K12Q12852 859 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 TBC1D10BQ4KMP7 808 aaPredicted RBP15.24■□□□□ 0.03
SIX1-203ENST00000554986 TMC6Q7Z403 805 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 HOMER1Q86YM7 354 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 OGFOD1Q8N543 542 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 MAGEB6Q8N7X4 407 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 GEMIN8Q9NWZ8 242 aaKnown RBP15.24■□□□□ 0.03
SIX1-203ENST00000554986 HACL1Q9UJ83 578 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 HDAC9Q9UKV0 1011 aa15.24■□□□□ 0.03
SIX1-203ENST00000554986 MAST3O60307 1309 aa15.23■□□□□ 0.03
SIX1-203ENST00000554986 GOLGA6L9A6NEM1 432 aa15.23■□□□□ 0.03
SIX1-203ENST00000554986 H7C1D1 291 aa15.23■□□□□ 0.03
SIX1-203ENST00000554986 IVLP07476 585 aa15.23■□□□□ 0.03
SIX1-203ENST00000554986 PDE6AP16499 860 aa15.23■□□□□ 0.03
SIX1-203ENST00000554986 CFAP100Q494V2 611 aa15.23■□□□□ 0.03
SIX1-203ENST00000554986 RBM26Q5T8P6 1007 aaKnown RBP15.23■□□□□ 0.03
SIX1-203ENST00000554986 SLC9C2Q5TAH2 1124 aa15.23■□□□□ 0.03
SIX1-203ENST00000554986 RSRC2Q7L4I2 434 aaKnown RBP15.23■□□□□ 0.03
SIX1-203ENST00000554986 FMR1NBQ8N0W7 255 aaPredicted RBP15.23■□□□□ 0.03
SIX1-203ENST00000554986 TRERF1Q96PN7 1200 aa15.23■□□□□ 0.03
SIX1-203ENST00000554986 FSD1Q9BTV5 496 aa15.23■□□□□ 0.03
SIX1-203ENST00000554986 BRMS1Q9HCU9 246 aa15.23■□□□□ 0.03
SIX1-203ENST00000554986 ARFGAP3Q9NP61 516 aa15.23■□□□□ 0.03
SIX1-203ENST00000554986 SERPINA10Q9UK55 444 aa15.23■□□□□ 0.03
SIX1-203ENST00000554986 TCRBV5S4A2TA0A5A2 114 aa15.22■□□□□ 0.03
SIX1-203ENST00000554986 IKBKBO14920 756 aa15.22■□□□□ 0.03
SIX1-203ENST00000554986 ZSCAN12O43309 604 aa15.22■□□□□ 0.03
SIX1-203ENST00000554986 MYO1BO43795 1136 aa15.22■□□□□ 0.03
SIX1-203ENST00000554986 DHX16O60231 1041 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms